EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSTOG00000033664 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Plus strand
Length: 1449 bases
Position: chrJH393411.1:4225600-4227048
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000029216	LSM	PF01423.22	6.6e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000041728	-	1302	-	ENSSTOP00000029216	240 (aa)	-	A0A287D6S3

Gene Model

Click here to download ENSSTOG00000033664's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000033664's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSTOG00000033664	-	92	91.403	ENSSTOG00000001339	SNRPN	92	91.403
ENSSTOG00000033664	-	90	80.556	ENSSTOG00000027821	-	62	97.794

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000033664	-	100	98.333	ENSG00000125835	SNRPB	100	98.333	Homo_sapiens
ENSSTOG00000033664	-	75	91.160	ENSAPOG00000019606	snrpb	56	92.857	Acanthochromis_polyacanthus
ENSSTOG00000033664	-	99	98.326	ENSAMEG00000011353	SNRPB	98	98.326	Ailuropoda_melanoleuca
ENSSTOG00000033664	-	73	90.286	ENSACIG00000014480	snrpb	71	92.593	Amphilophus_citrinellus
ENSSTOG00000033664	-	75	91.160	ENSAOCG00000006876	snrpb	69	92.857	Amphiprion_ocellaris
ENSSTOG00000033664	-	75	91.160	ENSAPEG00000021585	snrpb	71	92.857	Amphiprion_percula
ENSSTOG00000033664	-	75	90.608	ENSATEG00000009836	snrpb	69	92.262	Anabas_testudineus
ENSSTOG00000033664	-	89	93.427	ENSACAG00000002053	SNRPB	92	93.427	Anolis_carolinensis
ENSSTOG00000033664	-	100	98.333	ENSANAG00000024443	-	100	98.333	Aotus_nancymaae
ENSSTOG00000033664	-	96	91.775	ENSANAG00000036271	-	85	92.417	Aotus_nancymaae
ENSSTOG00000033664	-	75	91.160	ENSACLG00000014707	snrpb	69	92.857	Astatotilapia_calliptera
ENSSTOG00000033664	-	76	91.257	ENSAMXG00000029434	snrpb	70	92.262	Astyanax_mexicanus
ENSSTOG00000033664	-	95	97.817	ENSBTAG00000001038	SNRPB	99	97.817	Bos_taurus
ENSSTOG00000033664	-	95	98.253	ENSCJAG00000020971	-	99	98.253	Callithrix_jacchus
ENSSTOG00000033664	-	89	90.187	ENSCJAG00000023097	-	88	90.047	Callithrix_jacchus
ENSSTOG00000033664	-	95	98.253	ENSCAFG00000006693	-	99	98.253	Canis_familiaris
ENSSTOG00000033664	-	78	86.842	ENSCAFG00000031109	-	79	83.158	Canis_familiaris
ENSSTOG00000033664	-	100	98.333	ENSCAFG00020016981	-	100	98.333	Canis_lupus_dingo
ENSSTOG00000033664	-	95	97.817	ENSCHIG00000025449	-	99	97.817	Capra_hircus
ENSSTOG00000033664	-	97	74.138	ENSTSYG00000032303	-	55	77.333	Carlito_syrichta
ENSSTOG00000033664	-	95	98.253	ENSTSYG00000014498	-	99	98.253	Carlito_syrichta
ENSSTOG00000033664	-	99	98.326	ENSCAPG00000012669	SNRPB	99	98.326	Cavia_aperea
ENSSTOG00000033664	-	95	98.253	ENSCPOG00000039408	SNRPB	99	98.253	Cavia_porcellus
ENSSTOG00000033664	-	100	98.333	ENSCCAG00000026002	SNRPB	100	98.333	Cebus_capucinus
ENSSTOG00000033664	-	53	87.402	ENSCCAG00000035140	-	89	86.275	Cebus_capucinus
ENSSTOG00000033664	-	95	98.253	ENSCATG00000030230	SNRPB	99	98.253	Cercocebus_atys
ENSSTOG00000033664	-	100	97.083	ENSCLAG00000012442	SNRPB	100	97.083	Chinchilla_lanigera
ENSSTOG00000033664	-	95	98.253	ENSCSAG00000010840	SNRPB	99	98.253	Chlorocebus_sabaeus
ENSSTOG00000033664	-	92	94.570	ENSCPBG00000026801	SNRPB	96	94.570	Chrysemys_picta_bellii
ENSSTOG00000033664	-	100	98.333	ENSCANG00000019461	SNRPB	100	98.333	Colobus_angolensis_palliatus
ENSSTOG00000033664	-	95	98.253	ENSCGRG00001023046	Snrpb	99	98.253	Cricetulus_griseus_chok1gshd
ENSSTOG00000033664	-	92	98.190	ENSCGRG00000010423	Snrpb	98	98.190	Cricetulus_griseus_crigri
ENSSTOG00000033664	-	76	90.710	ENSCSEG00000020328	snrpb	70	92.857	Cynoglossus_semilaevis
ENSSTOG00000033664	-	70	91.667	ENSDARG00000011125	snrpb	69	92.857	Danio_rerio
ENSSTOG00000033664	-	100	98.333	ENSDNOG00000015545	-	100	98.333	Dasypus_novemcinctus
ENSSTOG00000033664	-	72	93.064	ENSDNOG00000007896	-	87	93.839	Dasypus_novemcinctus
ENSSTOG00000033664	-	96	97.826	ENSDORG00000029558	Snrpb	100	97.826	Dipodomys_ordii
ENSSTOG00000033664	-	62	68.456	FBgn0262601	SmB	74	68.456	Drosophila_melanogaster
ENSSTOG00000033664	-	75	78.495	ENSEBUG00000007467	SNRPB	62	86.577	Eptatretus_burgeri
ENSSTOG00000033664	-	95	97.817	ENSEASG00005012991	SNRPB	99	97.817	Equus_asinus_asinus
ENSSTOG00000033664	-	95	98.253	ENSECAG00000011944	SNRPB	99	98.253	Equus_caballus
ENSSTOG00000033664	-	72	98.266	ENSEEUG00000015568	SNRPB	74	98.104	Erinaceus_europaeus
ENSSTOG00000033664	-	60	94.406	ENSELUG00000014564	snrpb	71	91.358	Esox_lucius
ENSSTOG00000033664	-	95	98.253	ENSFCAG00000034090	-	99	98.253	Felis_catus
ENSSTOG00000033664	-	89	93.897	ENSFALG00000004866	SNRPB	92	93.897	Ficedula_albicollis
ENSSTOG00000033664	-	99	98.326	ENSFDAG00000009937	SNRPB	99	98.253	Fukomys_damarensis
ENSSTOG00000033664	-	92	94.118	ENSGALG00000035421	SNRPN	92	94.118	Gallus_gallus
ENSSTOG00000033664	-	72	91.279	ENSGAFG00000019558	snrpb	72	92.216	Gambusia_affinis
ENSSTOG00000033664	-	76	89.617	ENSGACG00000003262	snrpb	70	92.857	Gasterosteus_aculeatus
ENSSTOG00000033664	-	92	94.570	ENSGAGG00000001308	SNRPB	92	94.570	Gopherus_agassizii
ENSSTOG00000033664	-	95	98.253	ENSGGOG00000016138	SNRPB	99	98.253	Gorilla_gorilla
ENSSTOG00000033664	-	75	91.160	ENSHBUG00000008369	snrpb	69	92.857	Haplochromis_burtoni
ENSSTOG00000033664	-	63	88.667	ENSHGLG00000016505	-	72	88.667	Heterocephalus_glaber_female
ENSSTOG00000033664	-	95	98.253	ENSHGLG00000016241	-	99	98.253	Heterocephalus_glaber_female
ENSSTOG00000033664	-	100	98.333	ENSHGLG00100012877	-	100	98.333	Heterocephalus_glaber_male
ENSSTOG00000033664	-	63	88.667	ENSHGLG00100004178	-	72	88.667	Heterocephalus_glaber_male
ENSSTOG00000033664	-	76	90.710	ENSHCOG00000014888	snrpb	70	92.857	Hippocampus_comes
ENSSTOG00000033664	-	70	91.667	ENSIPUG00000024569	SNRPB	70	92.857	Ictalurus_punctatus
ENSSTOG00000033664	-	95	98.253	ENSJJAG00000024170	Snrpb	99	98.253	Jaculus_jaculus
ENSSTOG00000033664	-	72	92.486	ENSKMAG00000014494	snrpb	68	93.452	Kryptolebias_marmoratus
ENSSTOG00000033664	-	76	90.710	ENSLBEG00000005678	snrpb	70	92.857	Labrus_bergylta
ENSSTOG00000033664	-	92	91.403	ENSLACG00000011459	SNRPB	92	91.403	Latimeria_chalumnae
ENSSTOG00000033664	-	70	92.262	ENSLOCG00000002687	snrpb	70	93.452	Lepisosteus_oculatus
ENSSTOG00000033664	-	95	94.298	ENSLAFG00000017588	SNRPB	99	94.298	Loxodonta_africana
ENSSTOG00000033664	-	95	98.253	ENSMFAG00000038756	SNRPB	99	98.253	Macaca_fascicularis
ENSSTOG00000033664	-	95	98.253	ENSMMUG00000010050	SNRPB	99	98.253	Macaca_mulatta
ENSSTOG00000033664	-	95	98.253	ENSMNEG00000027954	SNRPB	99	98.253	Macaca_nemestrina
ENSSTOG00000033664	-	100	98.333	ENSMLEG00000022346	SNRPB	100	98.333	Mandrillus_leucophaeus
ENSSTOG00000033664	-	75	91.111	ENSMAMG00000009294	snrpb	67	92.814	Mastacembelus_armatus
ENSSTOG00000033664	-	75	91.160	ENSMZEG00005011856	snrpb	69	92.857	Maylandia_zebra
ENSSTOG00000033664	-	95	97.817	ENSMICG00000016519	SNRPB	99	97.817	Microcebus_murinus
ENSSTOG00000033664	-	99	81.513	ENSMICG00000015983	-	95	88.889	Microcebus_murinus
ENSSTOG00000033664	-	95	97.817	ENSMOCG00000002892	-	99	97.817	Microtus_ochrogaster
ENSSTOG00000033664	-	72	78.035	ENSMOCG00000021362	-	90	76.303	Microtus_ochrogaster
ENSSTOG00000033664	-	76	90.659	ENSMMOG00000013226	snrpb	71	92.814	Mola_mola
ENSSTOG00000033664	-	75	90.608	ENSMALG00000020839	snrpb	56	92.262	Monopterus_albus
ENSSTOG00000033664	-	95	97.817	MGP_CAROLIEiJ_G0024293	Snrpb	99	97.817	Mus_caroli
ENSSTOG00000033664	-	95	97.817	ENSMUSG00000027404	Snrpb	99	97.817	Mus_musculus
ENSSTOG00000033664	-	95	97.817	MGP_PahariEiJ_G0025738	Snrpb	99	97.817	Mus_pahari
ENSSTOG00000033664	-	95	97.817	MGP_SPRETEiJ_G0025213	Snrpb	99	97.817	Mus_spretus
ENSSTOG00000033664	-	95	98.253	ENSMPUG00000009283	SNRPB	99	98.253	Mustela_putorius_furo
ENSSTOG00000033664	-	100	95.000	ENSMLUG00000016951	SNRPB	100	95.000	Myotis_lucifugus
ENSSTOG00000033664	-	95	98.253	ENSNGAG00000012051	Snrpb	99	98.253	Nannospalax_galili
ENSSTOG00000033664	-	75	88.398	ENSNBRG00000006353	snrpb	62	91.463	Neolamprologus_brichardi
ENSSTOG00000033664	-	100	98.333	ENSNLEG00000029067	SNRPB	100	98.333	Nomascus_leucogenys
ENSSTOG00000033664	-	72	97.093	ENSMEUG00000015625	SNRPB	76	97.093	Notamacropus_eugenii
ENSSTOG00000033664	-	99	94.561	ENSODEG00000004305	-	99	98.253	Octodon_degus
ENSSTOG00000033664	-	100	93.750	ENSODEG00000016060	-	100	93.750	Octodon_degus
ENSSTOG00000033664	-	75	91.160	ENSONIG00000000248	snrpb	69	92.857	Oreochromis_niloticus
ENSSTOG00000033664	-	100	97.917	ENSOCUG00000014042	-	100	97.917	Oryctolagus_cuniculus
ENSSTOG00000033664	-	95	95.595	ENSOCUG00000028215	-	95	95.595	Oryctolagus_cuniculus
ENSSTOG00000033664	-	90	93.023	ENSOCUG00000021456	-	88	92.891	Oryctolagus_cuniculus
ENSSTOG00000033664	-	75	91.620	ENSOCUG00000022423	-	86	94.643	Oryctolagus_cuniculus
ENSSTOG00000033664	-	89	69.953	ENSOCUG00000026813	-	63	68.919	Oryctolagus_cuniculus
ENSSTOG00000033664	-	75	90.608	ENSORLG00000021862	snrpb	69	92.857	Oryzias_latipes
ENSSTOG00000033664	-	100	98.333	ENSOGAG00000016149	SNRPB	100	98.333	Otolemur_garnettii
ENSSTOG00000033664	-	95	97.817	ENSOARG00000006740	SNRPB	99	97.817	Ovis_aries
ENSSTOG00000033664	-	95	98.253	ENSPPAG00000036314	SNRPB	99	98.253	Pan_paniscus
ENSSTOG00000033664	-	100	98.333	ENSPPRG00000003233	-	100	98.333	Panthera_pardus
ENSSTOG00000033664	-	99	98.326	ENSPTIG00000007468	SNRPB	99	98.326	Panthera_tigris_altaica
ENSSTOG00000033664	-	95	98.253	ENSPTRG00000013176	SNRPB	99	98.253	Pan_troglodytes
ENSSTOG00000033664	-	100	98.333	ENSPANG00000020362	SNRPB	100	98.333	Papio_anubis
ENSSTOG00000033664	-	70	91.071	ENSPKIG00000002865	snrpb	70	92.262	Paramormyrops_kingsleyae
ENSSTOG00000033664	-	92	94.545	ENSPSIG00000014125	SNRPB	91	94.545	Pelodiscus_sinensis
ENSSTOG00000033664	-	74	88.764	ENSPMGG00000016349	snrpb	69	90.184	Periophthalmus_magnuspinnatus
ENSSTOG00000033664	-	95	98.253	ENSPEMG00000007948	Snrpb	99	98.253	Peromyscus_maniculatus_bairdii
ENSSTOG00000033664	-	72	97.093	ENSPCIG00000004694	SNRPB	71	97.093	Phascolarctos_cinereus
ENSSTOG00000033664	-	95	98.253	ENSPPYG00000010841	SNRPB	99	98.253	Pongo_abelii
ENSSTOG00000033664	-	95	98.253	ENSPCOG00000013686	SNRPB	99	98.253	Propithecus_coquereli
ENSSTOG00000033664	-	95	96.916	ENSPVAG00000017013	SNRPB	80	96.916	Pteropus_vampyrus
ENSSTOG00000033664	-	75	91.160	ENSPNYG00000014788	snrpb	69	92.857	Pundamilia_nyererei
ENSSTOG00000033664	-	74	91.525	ENSPNAG00000016126	snrpb	70	92.857	Pygocentrus_nattereri
ENSSTOG00000033664	-	95	98.253	ENSRNOG00000006961	Snrpb	99	98.253	Rattus_norvegicus
ENSSTOG00000033664	-	100	97.917	ENSRBIG00000040505	SNRPB	100	97.917	Rhinopithecus_bieti
ENSSTOG00000033664	-	100	98.333	ENSRROG00000036094	SNRPB	100	98.333	Rhinopithecus_roxellana
ENSSTOG00000033664	-	100	98.333	ENSSBOG00000027310	SNRPB	100	98.333	Saimiri_boliviensis_boliviensis
ENSSTOG00000033664	-	100	96.667	ENSSHAG00000010394	SNRPB	100	96.667	Sarcophilus_harrisii
ENSSTOG00000033664	-	70	90.476	ENSSFOG00015002870	snrpb	70	91.667	Scleropages_formosus
ENSSTOG00000033664	-	76	90.164	ENSSMAG00000006766	snrpb	70	92.262	Scophthalmus_maximus
ENSSTOG00000033664	-	75	91.160	ENSSDUG00000018539	snrpb	69	92.857	Seriola_dumerili
ENSSTOG00000033664	-	75	91.160	ENSSLDG00000022391	snrpb	69	92.857	Seriola_lalandi_dorsalis
ENSSTOG00000033664	-	72	83.721	ENSSARG00000003084	SNRPB	90	86.190	Sorex_araneus
ENSSTOG00000033664	-	92	94.545	ENSSPUG00000015659	SNRPB	92	94.545	Sphenodon_punctatus
ENSSTOG00000033664	-	75	91.160	ENSSPAG00000021992	snrpb	69	92.857	Stegastes_partitus
ENSSTOG00000033664	-	95	97.817	ENSSSCG00000040857	-	99	97.817	Sus_scrofa
ENSSTOG00000033664	-	95	79.476	ENSSSCG00000011966	-	91	75.472	Sus_scrofa
ENSSTOG00000033664	-	92	79.091	ENSTGUG00000005684	SNRPB	92	79.091	Taeniopygia_guttata
ENSSTOG00000033664	-	76	90.164	ENSTRUG00000023094	snrpb	72	92.262	Takifugu_rubripes
ENSSTOG00000033664	-	76	90.164	ENSTNIG00000002991	snrpb	70	92.262	Tetraodon_nigroviridis
ENSSTOG00000033664	-	72	98.266	ENSUAMG00000005984	-	83	98.266	Ursus_americanus
ENSSTOG00000033664	-	57	97.810	ENSUMAG00000002123	-	65	95.714	Ursus_maritimus
ENSSTOG00000033664	-	100	97.917	ENSVVUG00000025654	-	100	97.917	Vulpes_vulpes
ENSSTOG00000033664	-	100	75.833	ENSVVUG00000010086	-	92	80.569	Vulpes_vulpes
ENSSTOG00000033664	-	94	36.885	ENSVVUG00000018297	-	72	36.885	Vulpes_vulpes
ENSSTOG00000033664	-	92	93.665	ENSXETG00000027266	snrpb	93	93.665	Xenopus_tropicalis
ENSSTOG00000033664	-	93	64.126	ENSXMAG00000028767	snrpb	62	89.583	Xiphophorus_maculatus