EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSTOG00000033893 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Minus strand
Length: 5722 bases
Position: chrJH393469.1:80530-86251
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000030328	zf-C2H2	PF00096.26	2.2e-82	1	14
ENSSTOP00000030328	zf-C2H2	PF00096.26	2.2e-82	2	14
ENSSTOP00000030328	zf-C2H2	PF00096.26	2.2e-82	3	14
ENSSTOP00000030328	zf-C2H2	PF00096.26	2.2e-82	4	14
ENSSTOP00000030328	zf-C2H2	PF00096.26	2.2e-82	5	14
ENSSTOP00000030328	zf-C2H2	PF00096.26	2.2e-82	6	14
ENSSTOP00000030328	zf-C2H2	PF00096.26	2.2e-82	7	14
ENSSTOP00000030328	zf-C2H2	PF00096.26	2.2e-82	8	14
ENSSTOP00000030328	zf-C2H2	PF00096.26	2.2e-82	9	14
ENSSTOP00000030328	zf-C2H2	PF00096.26	2.2e-82	10	14
ENSSTOP00000030328	zf-C2H2	PF00096.26	2.2e-82	11	14
ENSSTOP00000030328	zf-C2H2	PF00096.26	2.2e-82	12	14
ENSSTOP00000030328	zf-C2H2	PF00096.26	2.2e-82	13	14
ENSSTOP00000030328	zf-C2H2	PF00096.26	2.2e-82	14	14
ENSSTOP00000030328	zf-met	PF12874.7	5.2e-10	1	2
ENSSTOP00000030328	zf-met	PF12874.7	5.2e-10	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000036758	-	3976	-	ENSSTOP00000030328	674 (aa)	-	A0A287D9V8

Gene Model

Click here to download ENSSTOG00000033893's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000033893's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSTOG00000033893	-	66	55.556	ENSSTOG00000005655	ZNF367	52	55.556
ENSSTOG00000033893	-	88	50.309	ENSSTOG00000034090	ZNF226	81	50.309
ENSSTOG00000033893	-	74	37.791	ENSSTOG00000000887	ZNF784	66	37.079
ENSSTOG00000033893	-	77	49.261	ENSSTOG00000000130	ZNF691	82	49.261
ENSSTOG00000033893	-	76	41.935	ENSSTOG00000022105	-	92	41.935
ENSSTOG00000033893	-	79	52.029	ENSSTOG00000024118	-	83	52.029
ENSSTOG00000033893	-	82	50.000	ENSSTOG00000022317	ZFP1	90	50.000
ENSSTOG00000033893	-	74	35.865	ENSSTOG00000019944	ZNF319	94	37.045
ENSSTOG00000033893	-	76	56.400	ENSSTOG00000026739	ZNF2	72	56.400
ENSSTOG00000033893	-	74	36.653	ENSSTOG00000025586	ZNF865	78	32.806
ENSSTOG00000033893	-	88	50.843	ENSSTOG00000034297	-	80	48.177
ENSSTOG00000033893	-	78	49.265	ENSSTOG00000006365	BCL6B	55	49.265
ENSSTOG00000033893	-	77	36.604	ENSSTOG00000013853	GTF3A	85	36.604
ENSSTOG00000033893	-	66	44.444	ENSSTOG00000024979	OVOL2	62	44.444
ENSSTOG00000033893	-	85	40.278	ENSSTOG00000006987	ZNF236	72	41.905
ENSSTOG00000033893	-	72	44.030	ENSSTOG00000028743	SNAI2	56	44.030
ENSSTOG00000033893	-	75	44.767	ENSSTOG00000014583	GFI1	50	44.767
ENSSTOG00000033893	-	75	46.698	ENSSTOG00000026126	ZNF628	62	46.698
ENSSTOG00000033893	-	76	54.152	ENSSTOG00000030403	ZNF768	53	53.521
ENSSTOG00000033893	-	83	43.750	ENSSTOG00000023716	WT1	64	43.750
ENSSTOG00000033893	-	69	44.776	ENSSTOG00000032944	SCRT2	79	44.776
ENSSTOG00000033893	-	74	40.506	ENSSTOG00000027842	MAZ	78	36.946
ENSSTOG00000033893	-	90	53.303	ENSSTOG00000030417	-	98	53.303
ENSSTOG00000033893	-	75	36.607	ENSSTOG00000028612	ZNF574	93	36.607
ENSSTOG00000033893	-	74	47.727	ENSSTOG00000019989	ZFP64	69	38.187
ENSSTOG00000033893	-	72	40.449	ENSSTOG00000020707	PATZ1	59	30.286
ENSSTOG00000033893	-	74	41.237	ENSSTOG00000028569	ZNF423	100	41.237
ENSSTOG00000033893	-	74	50.355	ENSSTOG00000004741	PRDM5	83	50.355
ENSSTOG00000033893	-	75	35.179	ENSSTOG00000019390	ZNF526	77	34.932
ENSSTOG00000033893	-	97	56.167	ENSSTOG00000023536	-	88	56.167
ENSSTOG00000033893	-	91	54.824	ENSSTOG00000013458	ZNF112	95	46.774

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000033893	-	91	89.625	ENSCPOG00000033345	-	100	89.625	Cavia_porcellus
ENSSTOG00000033893	-	98	78.539	ENSCGRG00001023858	Zfp560	89	78.539	Cricetulus_griseus_chok1gshd
ENSSTOG00000033893	-	98	78.539	ENSCGRG00000012088	Zfp560	89	78.539	Cricetulus_griseus_crigri
ENSSTOG00000033893	-	91	91.040	ENSFDAG00000008687	-	100	91.040	Fukomys_damarensis
ENSSTOG00000033893	-	100	83.333	ENSHGLG00000019054	-	100	90.173	Heterocephalus_glaber_female
ENSSTOG00000033893	-	100	83.333	ENSHGLG00100015134	-	100	83.333	Heterocephalus_glaber_male
ENSSTOG00000033893	-	99	70.057	ENSMOCG00000007908	Zfp560	89	70.641	Microtus_ochrogaster
ENSSTOG00000033893	-	99	82.963	ENSNGAG00000015897	Zfp560	89	82.963	Nannospalax_galili
ENSSTOG00000033893	-	91	89.884	ENSODEG00000017047	-	100	89.884	Octodon_degus
ENSSTOG00000033893	-	87	82.060	ENSOCUG00000029594	-	99	82.060	Oryctolagus_cuniculus
ENSSTOG00000033893	-	86	55.593	ENSOGAG00000025131	ZNF121	100	55.593	Otolemur_garnettii
ENSSTOG00000033893	-	94	78.145	ENSRNOG00000048394	Zfp560	99	78.145	Rattus_norvegicus