EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSTOG00000034297 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Plus strand
Length: 189899 bases
Position: chrJH393522.1:2075835-2265733
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000024568	zf-C2H2	PF00096.26	2e-77	1	15
ENSSTOP00000024568	zf-C2H2	PF00096.26	2e-77	2	15
ENSSTOP00000024568	zf-C2H2	PF00096.26	2e-77	3	15
ENSSTOP00000024568	zf-C2H2	PF00096.26	2e-77	4	15
ENSSTOP00000024568	zf-C2H2	PF00096.26	2e-77	5	15
ENSSTOP00000024568	zf-C2H2	PF00096.26	2e-77	6	15
ENSSTOP00000024568	zf-C2H2	PF00096.26	2e-77	7	15
ENSSTOP00000024568	zf-C2H2	PF00096.26	2e-77	8	15
ENSSTOP00000024568	zf-C2H2	PF00096.26	2e-77	9	15
ENSSTOP00000024568	zf-C2H2	PF00096.26	2e-77	10	15
ENSSTOP00000024568	zf-C2H2	PF00096.26	2e-77	11	15
ENSSTOP00000024568	zf-C2H2	PF00096.26	2e-77	12	15
ENSSTOP00000024568	zf-C2H2	PF00096.26	2e-77	13	15
ENSSTOP00000024568	zf-C2H2	PF00096.26	2e-77	14	15
ENSSTOP00000024568	zf-C2H2	PF00096.26	2e-77	15	15
ENSSTOP00000024568	zf-met	PF12874.7	5.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000037117	-	5867	-	ENSSTOP00000024568	723 (aa)	-	A0A287CTH1

Gene Model

Click here to download ENSSTOG00000034297's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000034297's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSTOG00000034297	-	65	37.415	ENSSTOG00000028743	SNAI2	56	37.415
ENSSTOG00000034297	-	97	55.731	ENSSTOG00000026739	ZNF2	98	55.731
ENSSTOG00000034297	-	63	43.590	ENSSTOG00000022105	-	85	43.590
ENSSTOG00000034297	-	67	39.552	ENSSTOG00000032944	SCRT2	73	39.552
ENSSTOG00000034297	-	65	34.314	ENSSTOG00000019390	ZNF526	89	37.267
ENSSTOG00000034297	-	65	35.838	ENSSTOG00000000887	ZNF784	65	35.393
ENSSTOG00000034297	-	64	39.175	ENSSTOG00000028569	ZNF423	98	35.294
ENSSTOG00000034297	-	91	50.000	ENSSTOG00000013458	ZNF112	99	50.000
ENSSTOG00000034297	-	76	49.735	ENSSTOG00000024118	-	84	49.400
ENSSTOG00000034297	-	76	50.962	ENSSTOG00000030417	-	96	50.962
ENSSTOG00000034297	-	67	52.399	ENSSTOG00000030403	ZNF768	54	52.593
ENSSTOG00000034297	-	73	44.554	ENSSTOG00000006987	ZNF236	72	46.809
ENSSTOG00000034297	-	64	44.615	ENSSTOG00000004741	PRDM5	86	44.615
ENSSTOG00000034297	-	60	41.237	ENSSTOG00000019989	ZFP64	69	36.512
ENSSTOG00000034297	-	70	33.438	ENSSTOG00000028612	ZNF574	84	34.954
ENSSTOG00000034297	-	63	41.584	ENSSTOG00000020707	PATZ1	52	31.628
ENSSTOG00000034297	-	65	48.990	ENSSTOG00000000130	ZNF691	71	48.990
ENSSTOG00000034297	-	66	42.157	ENSSTOG00000024979	OVOL2	52	42.157
ENSSTOG00000034297	-	66	40.110	ENSSTOG00000019944	ZNF319	93	40.274
ENSSTOG00000034297	-	93	31.395	ENSSTOG00000013393	ZNF212	72	31.395
ENSSTOG00000034297	-	66	41.509	ENSSTOG00000005866	SNAI1	62	41.509
ENSSTOG00000034297	-	66	33.846	ENSSTOG00000013853	GTF3A	86	33.846
ENSSTOG00000034297	-	72	43.544	ENSSTOG00000022317	ZFP1	97	43.544
ENSSTOG00000034297	-	62	40.385	ENSSTOG00000027842	MAZ	81	40.385
ENSSTOG00000034297	-	64	38.542	ENSSTOG00000026126	ZNF628	56	37.429
ENSSTOG00000034297	-	73	55.149	ENSSTOG00000034090	ZNF226	84	54.464
ENSSTOG00000034297	-	80	48.177	ENSSTOG00000033893	-	88	50.843
ENSSTOG00000034297	-	98	50.542	ENSSTOG00000023536	-	93	50.542
ENSSTOG00000034297	-	70	40.761	ENSSTOG00000025586	ZNF865	79	31.084

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000034297	-	70	52.941	ENSACIG00000011153	-	74	52.941	Amphilophus_citrinellus
ENSSTOG00000034297	-	73	51.368	ENSACIG00000019791	-	98	52.381	Amphilophus_citrinellus
ENSSTOG00000034297	-	73	50.000	ENSANAG00000032414	-	97	50.000	Aotus_nancymaae
ENSSTOG00000034297	-	66	50.990	ENSACLG00000001507	-	88	50.467	Astatotilapia_calliptera
ENSSTOG00000034297	-	68	47.956	ENSACLG00000022499	-	92	47.956	Astatotilapia_calliptera
ENSSTOG00000034297	-	72	51.786	ENSACLG00000017329	-	85	51.786	Astatotilapia_calliptera
ENSSTOG00000034297	-	71	47.249	ENSACLG00000014167	-	69	47.249	Astatotilapia_calliptera
ENSSTOG00000034297	-	75	50.638	ENSACLG00000020474	-	83	50.638	Astatotilapia_calliptera
ENSSTOG00000034297	-	70	51.136	ENSAMXG00000031844	-	97	50.814	Astyanax_mexicanus
ENSSTOG00000034297	-	69	54.046	ENSAMXG00000039162	-	96	54.046	Astyanax_mexicanus
ENSSTOG00000034297	-	73	54.360	ENSAMXG00000036849	-	94	54.360	Astyanax_mexicanus
ENSSTOG00000034297	-	68	53.871	ENSAMXG00000038324	-	82	53.871	Astyanax_mexicanus
ENSSTOG00000034297	-	69	53.102	ENSAMXG00000010078	-	86	53.102	Astyanax_mexicanus
ENSSTOG00000034297	-	78	50.000	ENSAMXG00000031501	-	94	49.455	Astyanax_mexicanus
ENSSTOG00000034297	-	74	51.117	ENSAMXG00000039770	-	96	51.117	Astyanax_mexicanus
ENSSTOG00000034297	-	69	56.828	ENSAMXG00000031646	-	98	56.828	Astyanax_mexicanus
ENSSTOG00000034297	-	74	48.750	ENSCHIG00000015741	-	90	48.750	Capra_hircus
ENSSTOG00000034297	-	79	59.048	ENSCCAG00000035188	-	85	59.048	Cebus_capucinus
ENSSTOG00000034297	-	68	55.882	ENSCPBG00000001258	-	97	55.882	Chrysemys_picta_bellii
ENSSTOG00000034297	-	86	48.214	ENSDNOG00000048084	-	98	48.214	Dasypus_novemcinctus
ENSSTOG00000034297	-	77	52.133	ENSETEG00000002865	-	85	45.482	Echinops_telfairi
ENSSTOG00000034297	-	71	47.352	ENSEBUG00000011582	-	73	47.352	Eptatretus_burgeri
ENSSTOG00000034297	-	73	47.407	ENSEBUG00000012748	-	76	44.894	Eptatretus_burgeri
ENSSTOG00000034297	-	69	52.727	ENSEBUG00000008157	-	99	49.778	Eptatretus_burgeri
ENSSTOG00000034297	-	77	48.851	ENSEBUG00000011479	-	83	45.845	Eptatretus_burgeri
ENSSTOG00000034297	-	71	49.074	ENSECAG00000035557	-	76	47.917	Equus_caballus
ENSSTOG00000034297	-	66	42.143	ENSFHEG00000016184	-	78	42.143	Fundulus_heteroclitus
ENSSTOG00000034297	-	64	44.000	ENSGMOG00000004315	-	97	44.000	Gadus_morhua
ENSSTOG00000034297	-	73	38.700	ENSGACG00000019863	-	98	38.700	Gasterosteus_aculeatus
ENSSTOG00000034297	-	72	55.556	ENSGAGG00000007230	-	81	55.556	Gopherus_agassizii
ENSSTOG00000034297	-	70	54.098	ENSGAGG00000013851	-	76	54.098	Gopherus_agassizii
ENSSTOG00000034297	-	64	44.654	ENSHBUG00000006238	-	94	44.550	Haplochromis_burtoni
ENSSTOG00000034297	-	67	51.000	ENSHBUG00000019800	-	95	51.000	Haplochromis_burtoni
ENSSTOG00000034297	-	66	47.241	ENSHBUG00000013264	-	88	47.241	Haplochromis_burtoni
ENSSTOG00000034297	-	65	52.747	ENSHBUG00000021028	-	82	45.317	Haplochromis_burtoni
ENSSTOG00000034297	-	77	54.576	ENSHBUG00000017372	-	90	54.576	Haplochromis_burtoni
ENSSTOG00000034297	-	73	51.770	ENSHBUG00000000146	-	93	51.770	Haplochromis_burtoni
ENSSTOG00000034297	-	69	50.462	ENSHGLG00000018394	-	93	50.462	Heterocephalus_glaber_female
ENSSTOG00000034297	-	66	54.455	ENSIPUG00000021484	-	98	54.455	Ictalurus_punctatus
ENSSTOG00000034297	-	66	52.607	ENSIPUG00000003960	-	90	52.607	Ictalurus_punctatus
ENSSTOG00000034297	-	75	48.450	ENSIPUG00000006936	-	96	47.414	Ictalurus_punctatus
ENSSTOG00000034297	-	73	55.263	ENSIPUG00000021527	-	92	55.263	Ictalurus_punctatus
ENSSTOG00000034297	-	69	53.633	ENSIPUG00000021434	-	94	53.633	Ictalurus_punctatus
ENSSTOG00000034297	-	69	53.395	ENSIPUG00000009750	-	85	53.395	Ictalurus_punctatus
ENSSTOG00000034297	-	66	53.927	ENSIPUG00000013065	-	99	50.993	Ictalurus_punctatus
ENSSTOG00000034297	-	78	52.282	ENSIPUG00000022751	-	98	52.201	Ictalurus_punctatus
ENSSTOG00000034297	-	69	52.139	ENSIPUG00000021518	-	88	51.604	Ictalurus_punctatus
ENSSTOG00000034297	-	71	51.071	ENSIPUG00000015233	-	61	51.071	Ictalurus_punctatus
ENSSTOG00000034297	-	69	52.915	ENSIPUG00000011073	-	98	52.915	Ictalurus_punctatus
ENSSTOG00000034297	-	73	54.733	ENSIPUG00000001941	-	96	54.733	Ictalurus_punctatus
ENSSTOG00000034297	-	72	53.211	ENSIPUG00000021472	-	84	53.211	Ictalurus_punctatus
ENSSTOG00000034297	-	76	57.931	ENSMFAG00000046052	-	85	57.931	Macaca_fascicularis
ENSSTOG00000034297	-	76	58.276	ENSMNEG00000041636	-	85	58.276	Macaca_nemestrina
ENSSTOG00000034297	-	76	57.931	ENSMLEG00000032640	-	85	57.931	Mandrillus_leucophaeus
ENSSTOG00000034297	-	69	44.792	ENSMAMG00000009051	-	96	41.436	Mastacembelus_armatus
ENSSTOG00000034297	-	62	47.507	ENSMZEG00005012737	-	87	47.198	Maylandia_zebra
ENSSTOG00000034297	-	67	46.512	ENSMZEG00005027285	-	82	50.000	Maylandia_zebra
ENSSTOG00000034297	-	64	52.301	ENSMZEG00005021421	-	95	52.301	Maylandia_zebra
ENSSTOG00000034297	-	67	42.652	ENSMZEG00005019982	-	95	42.652	Maylandia_zebra
ENSSTOG00000034297	-	66	50.645	ENSMZEG00005020736	-	88	50.645	Maylandia_zebra
ENSSTOG00000034297	-	70	47.078	ENSMZEG00005027950	-	89	47.078	Maylandia_zebra
ENSSTOG00000034297	-	70	51.389	ENSMALG00000004413	-	99	51.389	Monopterus_albus
ENSSTOG00000034297	-	75	53.416	ENSNBRG00000015873	-	98	52.970	Neolamprologus_brichardi
ENSSTOG00000034297	-	73	45.758	ENSNBRG00000016603	-	87	45.758	Neolamprologus_brichardi
ENSSTOG00000034297	-	69	53.030	ENSNBRG00000013604	-	78	53.030	Neolamprologus_brichardi
ENSSTOG00000034297	-	67	45.093	ENSNBRG00000016582	-	84	45.093	Neolamprologus_brichardi
ENSSTOG00000034297	-	69	49.231	ENSNBRG00000015652	-	95	44.170	Neolamprologus_brichardi
ENSSTOG00000034297	-	69	50.265	ENSONIG00000020516	-	97	50.259	Oreochromis_niloticus
ENSSTOG00000034297	-	67	45.608	ENSONIG00000000122	-	99	45.608	Oreochromis_niloticus
ENSSTOG00000034297	-	76	44.944	ENSONIG00000007931	-	85	44.944	Oreochromis_niloticus
ENSSTOG00000034297	-	66	48.899	ENSONIG00000021124	-	100	48.899	Oreochromis_niloticus
ENSSTOG00000034297	-	76	43.316	ENSONIG00000001834	-	99	43.316	Oreochromis_niloticus
ENSSTOG00000034297	-	66	47.826	ENSONIG00000000093	-	99	41.274	Oreochromis_niloticus
ENSSTOG00000034297	-	72	47.160	ENSONIG00000015166	-	100	47.160	Oreochromis_niloticus
ENSSTOG00000034297	-	72	41.551	ENSONIG00000008953	-	93	41.551	Oreochromis_niloticus
ENSSTOG00000034297	-	84	48.908	ENSORLG00015012951	-	94	45.675	Oryzias_latipes_hsok
ENSSTOG00000034297	-	97	52.000	ENSOGAG00000025289	-	99	49.328	Otolemur_garnettii
ENSSTOG00000034297	-	76	57.931	ENSPANG00000030978	-	89	57.931	Papio_anubis
ENSSTOG00000034297	-	97	45.407	ENSPEMG00000016975	Zfp940	99	43.213	Peromyscus_maniculatus_bairdii
ENSSTOG00000034297	-	68	48.548	ENSPMEG00000004595	-	95	46.096	Poecilia_mexicana
ENSSTOG00000034297	-	97	58.769	ENSPPYG00000009906	-	99	58.769	Pongo_abelii
ENSSTOG00000034297	-	67	46.897	ENSPNYG00000024244	-	94	46.897	Pundamilia_nyererei
ENSSTOG00000034297	-	70	58.065	ENSPNAG00000011625	-	95	58.065	Pygocentrus_nattereri
ENSSTOG00000034297	-	70	55.556	ENSPNAG00000019338	-	98	55.556	Pygocentrus_nattereri
ENSSTOG00000034297	-	70	57.586	ENSSBOG00000029728	-	85	57.586	Saimiri_boliviensis_boliviensis
ENSSTOG00000034297	-	73	54.654	ENSSPUG00000010059	-	87	54.654	Sphenodon_punctatus