EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSTOG00000034316 (Gene tree)
Gene ID: 101968011
Gene Symbol: SLIRP
Alias: C14orf156|DC50
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Plus strand
Length: 9542 bases
Position: chrJH393298.1:6485981-6495522
Accession: 101968011
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000030751	RRM_1	PF00076.22	1.3e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000040923	SLIRP-201	2199	XM_005321278	ENSSTOP00000030751	111 (aa)	XP_005321335	A0A287DB82

Gene Model

Click here to download ENSSTOG00000034316's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000034316's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSTOG00000034316	SLIRP	88	32.308	ENSSTOG00000024394	HNRNPAB	51	32.308

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000034316	SLIRP	87	67.010	ENSG00000119705	SLIRP	100	71.429	Homo_sapiens
ENSSTOG00000034316	SLIRP	68	56.000	ENSAPOG00000001298	slirp	75	56.000	Acanthochromis_polyacanthus
ENSSTOG00000034316	SLIRP	82	84.615	ENSAMEG00000003975	SLIRP	88	83.750	Ailuropoda_melanoleuca
ENSSTOG00000034316	SLIRP	82	49.451	ENSACIG00000023083	slirp	88	49.451	Amphilophus_citrinellus
ENSSTOG00000034316	SLIRP	78	54.023	ENSAOCG00000006342	slirp	87	54.023	Amphiprion_ocellaris
ENSSTOG00000034316	SLIRP	78	54.023	ENSAPEG00000015719	-	88	54.023	Amphiprion_percula
ENSSTOG00000034316	SLIRP	78	54.023	ENSAPEG00000015917	slirp	87	54.023	Amphiprion_percula
ENSSTOG00000034316	SLIRP	80	46.067	ENSATEG00000013525	slirp	89	46.067	Anabas_testudineus
ENSSTOG00000034316	SLIRP	79	50.000	ENSAMXG00000018693	slirp	87	50.575	Astyanax_mexicanus
ENSSTOG00000034316	SLIRP	100	76.577	ENSCJAG00000016946	SLIRP	90	77.000	Callithrix_jacchus
ENSSTOG00000034316	SLIRP	100	81.982	ENSCAFG00020015876	-	90	82.000	Canis_lupus_dingo
ENSSTOG00000034316	SLIRP	100	76.577	ENSCCAG00000030130	SLIRP	90	77.000	Cebus_capucinus
ENSSTOG00000034316	SLIRP	100	71.171	ENSCATG00000036327	SLIRP	90	69.000	Cercocebus_atys
ENSSTOG00000034316	SLIRP	90	71.000	ENSCSAG00000011736	SLIRP	90	71.000	Chlorocebus_sabaeus
ENSSTOG00000034316	SLIRP	63	54.286	ENSCPBG00000026327	SLIRP	71	54.286	Chrysemys_picta_bellii
ENSSTOG00000034316	SLIRP	65	81.944	ENSCANG00000032892	SLIRP	80	78.205	Colobus_angolensis_palliatus
ENSSTOG00000034316	SLIRP	100	67.568	ENSCGRG00001024068	Slirp	83	72.826	Cricetulus_griseus_chok1gshd
ENSSTOG00000034316	SLIRP	100	67.568	ENSCGRG00000017440	Slirp	83	72.826	Cricetulus_griseus_crigri
ENSSTOG00000034316	SLIRP	81	50.000	ENSCSEG00000015766	slirp	75	55.405	Cynoglossus_semilaevis
ENSSTOG00000034316	SLIRP	62	57.971	ENSCVAG00000012504	slirp	68	57.971	Cyprinodon_variegatus
ENSSTOG00000034316	SLIRP	68	53.947	ENSDARG00000097753	slirp	73	54.667	Danio_rerio
ENSSTOG00000034316	SLIRP	84	70.968	ENSDNOG00000007721	SLIRP	90	69.000	Dasypus_novemcinctus
ENSSTOG00000034316	SLIRP	100	79.279	ENSDORG00000012379	Slirp	90	81.000	Dipodomys_ordii
ENSSTOG00000034316	SLIRP	90	71.000	ENSETEG00000010345	SLIRP	100	72.072	Echinops_telfairi
ENSSTOG00000034316	SLIRP	100	84.685	ENSEASG00005020193	SLIRP	90	84.000	Equus_asinus_asinus
ENSSTOG00000034316	SLIRP	96	57.944	ENSEEUG00000007257	SLIRP	91	61.290	Erinaceus_europaeus
ENSSTOG00000034316	SLIRP	77	51.163	ENSELUG00000016800	slirp	84	51.163	Esox_lucius
ENSSTOG00000034316	SLIRP	86	81.250	ENSFCAG00000036326	SLIRP	87	81.176	Felis_catus
ENSSTOG00000034316	SLIRP	64	50.704	ENSFALG00000012583	SLIRP	72	50.000	Ficedula_albicollis
ENSSTOG00000034316	SLIRP	97	74.336	ENSFDAG00000008347	SLIRP	86	76.289	Fukomys_damarensis
ENSSTOG00000034316	SLIRP	59	51.515	ENSFHEG00000004709	slirp	72	51.515	Fundulus_heteroclitus
ENSSTOG00000034316	SLIRP	78	48.315	ENSGMOG00000016948	slirp	85	48.315	Gadus_morhua
ENSSTOG00000034316	SLIRP	67	51.351	ENSGALG00000031238	SLIRP	71	55.224	Gallus_gallus
ENSSTOG00000034316	SLIRP	82	51.648	ENSGAFG00000010998	slirp	89	51.648	Gambusia_affinis
ENSSTOG00000034316	SLIRP	65	54.167	ENSGACG00000020137	slirp	84	54.167	Gasterosteus_aculeatus
ENSSTOG00000034316	SLIRP	81	50.000	ENSGAGG00000009953	SLIRP	62	50.000	Gopherus_agassizii
ENSSTOG00000034316	SLIRP	87	67.010	ENSGGOG00000011059	-	100	69.369	Gorilla_gorilla
ENSSTOG00000034316	SLIRP	100	73.874	ENSHGLG00000018491	SLIRP	90	74.000	Heterocephalus_glaber_female
ENSSTOG00000034316	SLIRP	100	73.874	ENSHGLG00100014153	SLIRP	90	74.000	Heterocephalus_glaber_male
ENSSTOG00000034316	SLIRP	81	48.889	ENSHCOG00000006795	slirp	90	48.889	Hippocampus_comes
ENSSTOG00000034316	SLIRP	77	48.864	ENSIPUG00000010214	SLIRP	88	48.864	Ictalurus_punctatus
ENSSTOG00000034316	SLIRP	81	41.111	ENSKMAG00000002038	slirp	87	41.111	Kryptolebias_marmoratus
ENSSTOG00000034316	SLIRP	81	46.667	ENSLBEG00000007564	slirp	88	46.667	Labrus_bergylta
ENSSTOG00000034316	SLIRP	82	50.549	ENSLACG00000013434	SLIRP	87	50.549	Latimeria_chalumnae
ENSSTOG00000034316	SLIRP	90	70.000	ENSMFAG00000042960	SLIRP	90	70.000	Macaca_fascicularis
ENSSTOG00000034316	SLIRP	90	70.000	ENSMMUG00000029256	SLIRP	90	70.000	Macaca_mulatta
ENSSTOG00000034316	SLIRP	90	70.000	ENSMNEG00000028921	SLIRP	90	70.000	Macaca_nemestrina
ENSSTOG00000034316	SLIRP	82	74.725	ENSMLEG00000043644	SLIRP	80	74.359	Mandrillus_leucophaeus
ENSSTOG00000034316	SLIRP	80	51.685	ENSMZEG00005004617	slirp	90	51.685	Maylandia_zebra
ENSSTOG00000034316	SLIRP	100	73.874	ENSMAUG00000003857	Slirp	90	75.000	Mesocricetus_auratus
ENSSTOG00000034316	SLIRP	100	72.072	ENSMICG00000012080	SLIRP	90	73.000	Microcebus_murinus
ENSSTOG00000034316	SLIRP	98	74.312	ENSMOCG00000016019	Slirp	88	76.531	Microtus_ochrogaster
ENSSTOG00000034316	SLIRP	79	50.000	ENSMMOG00000018268	slirp	88	50.000	Mola_mola
ENSSTOG00000034316	SLIRP	63	70.000	ENSMODG00000005207	-	99	70.000	Monodelphis_domestica
ENSSTOG00000034316	SLIRP	81	48.889	ENSMALG00000012581	slirp	90	48.889	Monopterus_albus
ENSSTOG00000034316	SLIRP	97	77.778	MGP_CAROLIEiJ_G0017995	Slirp	90	79.381	Mus_caroli
ENSSTOG00000034316	SLIRP	98	77.982	ENSMUSG00000021040	Slirp	88	79.592	Mus_musculus
ENSSTOG00000034316	SLIRP	98	77.982	MGP_SPRETEiJ_G0018840	Slirp	88	79.592	Mus_spretus
ENSSTOG00000034316	SLIRP	85	81.915	ENSMLUG00000024998	-	100	80.180	Myotis_lucifugus
ENSSTOG00000034316	SLIRP	90	81.000	ENSMLUG00000029544	-	100	80.180	Myotis_lucifugus
ENSSTOG00000034316	SLIRP	97	72.222	ENSNGAG00000016363	Slirp	90	75.532	Nannospalax_galili
ENSSTOG00000034316	SLIRP	93	62.136	ENSNLEG00000027238	-	90	66.667	Nomascus_leucogenys
ENSSTOG00000034316	SLIRP	100	66.667	ENSNLEG00000032459	-	90	64.000	Nomascus_leucogenys
ENSSTOG00000034316	SLIRP	98	75.229	ENSODEG00000012580	SLIRP	88	74.490	Octodon_degus
ENSSTOG00000034316	SLIRP	82	51.648	ENSONIG00000011692	slirp	89	52.222	Oreochromis_niloticus
ENSSTOG00000034316	SLIRP	97	52.727	ENSOANG00000022366	SLIRP	84	58.065	Ornithorhynchus_anatinus
ENSSTOG00000034316	SLIRP	80	51.685	ENSORLG00000010761	slirp	69	51.685	Oryzias_latipes
ENSSTOG00000034316	SLIRP	80	52.809	ENSORLG00020022188	slirp	89	52.809	Oryzias_latipes_hni
ENSSTOG00000034316	SLIRP	99	46.364	ENSORLG00015020171	slirp	88	51.685	Oryzias_latipes_hsok
ENSSTOG00000034316	SLIRP	80	50.562	ENSOMEG00000019321	slirp	89	50.562	Oryzias_melastigma
ENSSTOG00000034316	SLIRP	87	67.010	ENSPPAG00000040710	-	100	69.369	Pan_paniscus
ENSSTOG00000034316	SLIRP	81	85.556	ENSPPRG00000014350	SLIRP	81	86.076	Panthera_pardus
ENSSTOG00000034316	SLIRP	81	85.556	ENSPTIG00000014196	SLIRP	81	86.076	Panthera_tigris_altaica
ENSSTOG00000034316	SLIRP	86	68.421	ENSPTRG00000030691	SLIRP	100	70.642	Pan_troglodytes
ENSSTOG00000034316	SLIRP	100	72.973	ENSPANG00000026323	SLIRP	90	71.000	Papio_anubis
ENSSTOG00000034316	SLIRP	61	48.529	ENSPKIG00000008831	slirp	67	48.529	Paramormyrops_kingsleyae
ENSSTOG00000034316	SLIRP	62	62.319	ENSPMGG00000010541	slirp	79	62.319	Periophthalmus_magnuspinnatus
ENSSTOG00000034316	SLIRP	88	70.707	ENSPEMG00000013234	Slirp	96	69.091	Peromyscus_maniculatus_bairdii
ENSSTOG00000034316	SLIRP	60	50.746	ENSPMAG00000009355	slirp	74	50.746	Petromyzon_marinus
ENSSTOG00000034316	SLIRP	72	65.854	ENSPCIG00000026842	-	86	66.250	Phascolarctos_cinereus
ENSSTOG00000034316	SLIRP	82	49.451	ENSPFOG00000006758	slirp	89	49.451	Poecilia_formosa
ENSSTOG00000034316	SLIRP	82	50.549	ENSPLAG00000011140	slirp	89	50.549	Poecilia_latipinna
ENSSTOG00000034316	SLIRP	82	49.451	ENSPMEG00000019535	slirp	89	49.451	Poecilia_mexicana
ENSSTOG00000034316	SLIRP	68	53.947	ENSPREG00000011673	slirp	76	53.947	Poecilia_reticulata
ENSSTOG00000034316	SLIRP	88	68.367	ENSPPYG00000006030	SLIRP	87	68.367	Pongo_abelii
ENSSTOG00000034316	SLIRP	100	72.973	ENSPCOG00000015159	SLIRP	90	74.000	Propithecus_coquereli
ENSSTOG00000034316	SLIRP	79	56.818	ENSPNAG00000008633	slirp	89	56.818	Pygocentrus_nattereri
ENSSTOG00000034316	SLIRP	90	73.000	ENSRBIG00000032222	-	90	73.000	Rhinopithecus_bieti
ENSSTOG00000034316	SLIRP	68	77.333	ENSRBIG00000031396	-	75	77.333	Rhinopithecus_bieti
ENSSTOG00000034316	SLIRP	69	75.325	ENSRBIG00000032998	-	71	75.325	Rhinopithecus_bieti
ENSSTOG00000034316	SLIRP	88	68.367	ENSRBIG00000035817	-	89	68.367	Rhinopithecus_bieti
ENSSTOG00000034316	SLIRP	69	76.623	ENSRROG00000017133	-	80	76.623	Rhinopithecus_roxellana
ENSSTOG00000034316	SLIRP	68	78.667	ENSRROG00000035604	-	75	78.667	Rhinopithecus_roxellana
ENSSTOG00000034316	SLIRP	90	72.000	ENSRROG00000036656	-	90	72.000	Rhinopithecus_roxellana
ENSSTOG00000034316	SLIRP	74	73.171	ENSRROG00000041312	-	80	74.074	Rhinopithecus_roxellana
ENSSTOG00000034316	SLIRP	81	77.778	ENSSBOG00000020014	SLIRP	85	78.481	Saimiri_boliviensis_boliviensis
ENSSTOG00000034316	SLIRP	61	64.706	ENSSFOG00015011165	slirp	71	61.429	Scleropages_formosus
ENSSTOG00000034316	SLIRP	78	41.379	ENSSMAG00000012930	slirp	85	41.379	Scophthalmus_maximus
ENSSTOG00000034316	SLIRP	81	52.222	ENSSDUG00000021883	slirp	59	52.222	Seriola_dumerili
ENSSTOG00000034316	SLIRP	81	52.222	ENSSLDG00000023136	slirp	82	52.222	Seriola_lalandi_dorsalis
ENSSTOG00000034316	SLIRP	86	48.421	ENSSPUG00000009346	SLIRP	82	50.602	Sphenodon_punctatus
ENSSTOG00000034316	SLIRP	67	50.000	ENSSPAG00000013477	slirp	74	50.000	Stegastes_partitus
ENSSTOG00000034316	SLIRP	100	81.081	ENSSSCG00000028167	SLIRP	90	82.000	Sus_scrofa
ENSSTOG00000034316	SLIRP	77	47.674	ENSTGUG00000012337	SLIRP	81	47.674	Taeniopygia_guttata
ENSSTOG00000034316	SLIRP	81	46.154	ENSTRUG00000020127	slirp	88	46.667	Takifugu_rubripes
ENSSTOG00000034316	SLIRP	100	82.883	ENSUAMG00000022445	SLIRP	90	82.000	Ursus_americanus
ENSSTOG00000034316	SLIRP	100	83.784	ENSUMAG00000007166	SLIRP	90	83.000	Ursus_maritimus
ENSSTOG00000034316	SLIRP	100	74.775	ENSVPAG00000001781	SLIRP	90	75.000	Vicugna_pacos
ENSSTOG00000034316	SLIRP	86	83.333	ENSVVUG00000004436	SLIRP	90	82.000	Vulpes_vulpes
ENSSTOG00000034316	SLIRP	64	57.746	ENSXETG00000030343	SLIRP	80	57.746	Xenopus_tropicalis
ENSSTOG00000034316	SLIRP	82	48.352	ENSXCOG00000009422	slirp	89	48.352	Xiphophorus_couchianus
ENSSTOG00000034316	SLIRP	82	49.451	ENSXMAG00000015655	slirp	89	49.451	Xiphophorus_maculatus