EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSTOG00000034510 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Minus strand
Length: 1310 bases
Position: chrJH393493.1:380916-382225
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000026733	La	PF05383.17	4.6e-20	1	1
ENSSTOP00000032542	La	PF05383.17	4.6e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000030212	-	1035	-	ENSSTOP00000026733	344 (aa)	-	A0A287CZM8
ENSSTOT00000039658	-	987	-	ENSSTOP00000032542	328 (aa)	-	A0A287DGA2

Gene Model

Click here to download ENSSTOG00000034510's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000034510's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSTOG00000034510	-	84	70.130	ENSSTOG00000021917	-	91	71.061
ENSSTOG00000034510	-	80	61.290	ENSSTOG00000033183	-	97	59.206
ENSSTOG00000034510	-	87	79.193	ENSSTOG00000008596	-	96	79.193

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000034510	-	92	70.000	ENSG00000138709	LARP1B	96	74.143	Homo_sapiens
ENSSTOG00000034510	-	87	74.766	ENSAMEG00000002748	LARP1B	96	74.766	Ailuropoda_melanoleuca
ENSSTOG00000034510	-	73	73.162	ENSANAG00000034618	LARP1B	85	73.162	Aotus_nancymaae
ENSSTOG00000034510	-	84	74.441	ENSBTAG00000012135	LARP1B	60	74.441	Bos_taurus
ENSSTOG00000034510	-	87	73.520	ENSCJAG00000003338	LARP1B	96	73.520	Callithrix_jacchus
ENSSTOG00000034510	-	87	75.078	ENSCAFG00020018899	LARP1B	96	75.078	Canis_lupus_dingo
ENSSTOG00000034510	-	84	75.563	ENSCHIG00000023144	LARP1B	96	73.520	Capra_hircus
ENSSTOG00000034510	-	88	67.178	ENSTSYG00000002037	-	92	66.871	Carlito_syrichta
ENSSTOG00000034510	-	66	79.245	ENSCPOG00000034668	-	95	62.460	Cavia_porcellus
ENSSTOG00000034510	-	91	71.940	ENSCCAG00000021948	LARP1B	96	74.455	Cebus_capucinus
ENSSTOG00000034510	-	87	72.581	ENSCATG00000013541	LARP1B	94	73.927	Cercocebus_atys
ENSSTOG00000034510	-	84	70.740	ENSCLAG00000006448	-	96	70.000	Chinchilla_lanigera
ENSSTOG00000034510	-	90	62.270	ENSCANG00000026958	LARP1B	93	65.461	Colobus_angolensis_palliatus
ENSSTOG00000034510	-	87	72.274	ENSCGRG00001004660	-	96	72.274	Cricetulus_griseus_chok1gshd
ENSSTOG00000034510	-	87	71.963	ENSCGRG00000001914	-	96	71.963	Cricetulus_griseus_crigri
ENSSTOG00000034510	-	87	72.586	ENSDNOG00000018765	-	65	70.659	Dasypus_novemcinctus
ENSSTOG00000034510	-	87	75.078	ENSEASG00005018106	LARP1B	96	75.078	Equus_asinus_asinus
ENSSTOG00000034510	-	87	73.520	ENSFCAG00000014650	-	96	73.520	Felis_catus
ENSSTOG00000034510	-	91	70.402	ENSGGOG00000015900	LARP1B	96	74.143	Gorilla_gorilla
ENSSTOG00000034510	-	77	71.062	ENSHGLG00000013922	-	94	67.657	Heterocephalus_glaber_female
ENSSTOG00000034510	-	87	69.538	ENSHGLG00000006728	-	96	69.231	Heterocephalus_glaber_female
ENSSTOG00000034510	-	92	68.328	ENSHGLG00100014041	-	99	70.181	Heterocephalus_glaber_male
ENSSTOG00000034510	-	77	71.062	ENSHGLG00100016491	-	94	67.657	Heterocephalus_glaber_male
ENSSTOG00000034510	-	87	68.224	ENSJJAG00000022360	Larp1b	96	68.536	Jaculus_jaculus
ENSSTOG00000034510	-	78	56.949	ENSLACG00000015247	LARP1B	82	52.960	Latimeria_chalumnae
ENSSTOG00000034510	-	87	74.534	ENSLAFG00000008473	-	96	74.534	Loxodonta_africana
ENSSTOG00000034510	-	58	75.362	ENSMFAG00000003306	-	94	68.919	Macaca_fascicularis
ENSSTOG00000034510	-	92	70.725	ENSMFAG00000002218	LARP1B	96	74.143	Macaca_fascicularis
ENSSTOG00000034510	-	87	74.143	ENSMMUG00000021347	LARP1B	96	74.143	Macaca_mulatta
ENSSTOG00000034510	-	53	76.471	ENSMNEG00000027747	-	84	76.471	Macaca_nemestrina
ENSSTOG00000034510	-	69	44.737	ENSMZEG00005002545	larp1b	53	43.233	Maylandia_zebra
ENSSTOG00000034510	-	87	71.340	ENSMAUG00000007879	-	96	71.340	Mesocricetus_auratus
ENSSTOG00000034510	-	87	75.389	ENSMICG00000036111	LARP1B	96	75.389	Microcebus_murinus
ENSSTOG00000034510	-	87	61.386	ENSMICG00000028052	-	61	61.386	Microcebus_murinus
ENSSTOG00000034510	-	91	66.071	ENSMICG00000037883	-	96	66.071	Microcebus_murinus
ENSSTOG00000034510	-	70	73.664	ENSMOCG00000001490	Larp1b	95	72.624	Microtus_ochrogaster
ENSSTOG00000034510	-	87	71.028	MGP_CAROLIEiJ_G0024962	Larp1b	96	71.028	Mus_caroli
ENSSTOG00000034510	-	87	71.651	ENSMUSG00000025762	Larp1b	96	71.651	Mus_musculus
ENSSTOG00000034510	-	87	71.340	MGP_PahariEiJ_G0026403	Larp1b	96	71.340	Mus_pahari
ENSSTOG00000034510	-	87	71.651	MGP_SPRETEiJ_G0025897	Larp1b	96	71.651	Mus_spretus
ENSSTOG00000034510	-	87	74.455	ENSNLEG00000013819	LARP1B	96	74.455	Nomascus_leucogenys
ENSSTOG00000034510	-	87	70.093	ENSODEG00000001292	-	96	70.405	Octodon_degus
ENSSTOG00000034510	-	91	70.201	ENSPPAG00000030439	LARP1B	96	74.143	Pan_paniscus
ENSSTOG00000034510	-	87	73.520	ENSPPRG00000002743	-	96	73.520	Panthera_pardus
ENSSTOG00000034510	-	87	73.520	ENSPTIG00000011225	LARP1B	96	73.520	Panthera_tigris_altaica
ENSSTOG00000034510	-	91	70.487	ENSPTRG00000016437	LARP1B	96	74.455	Pan_troglodytes
ENSSTOG00000034510	-	92	70.435	ENSPANG00000012488	LARP1B	96	73.832	Papio_anubis
ENSSTOG00000034510	-	96	64.706	ENSPCIG00000026516	LARP1B	87	68.976	Phascolarctos_cinereus
ENSSTOG00000034510	-	77	42.808	ENSPREG00000005955	-	90	41.438	Poecilia_reticulata
ENSSTOG00000034510	-	89	73.574	ENSPCOG00000021874	LARP1B	93	76.038	Propithecus_coquereli
ENSSTOG00000034510	-	87	73.520	ENSRNOG00000038366	Larp1b	96	73.520	Rattus_norvegicus
ENSSTOG00000034510	-	87	72.274	ENSRBIG00000039982	-	95	69.782	Rhinopithecus_bieti
ENSSTOG00000034510	-	89	67.296	ENSRBIG00000038568	-	89	69.497	Rhinopithecus_bieti
ENSSTOG00000034510	-	89	59.561	ENSRROG00000038525	-	93	61.755	Rhinopithecus_roxellana
ENSSTOG00000034510	-	91	70.977	ENSRROG00000030771	LARP1B	96	74.766	Rhinopithecus_roxellana
ENSSTOG00000034510	-	64	57.399	ENSSSCG00000040491	-	79	63.874	Sus_scrofa
ENSSTOG00000034510	-	85	74.603	ENSSSCG00000034280	LARP1B	64	72.156	Sus_scrofa
ENSSTOG00000034510	-	93	69.817	ENSUAMG00000016938	-	100	70.405	Ursus_americanus
ENSSTOG00000034510	-	87	75.078	ENSVVUG00000011307	LARP1B	62	76.115	Vulpes_vulpes