EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSTOG00000034519 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Minus strand
Length: 935 bases
Position: chrJH393287.1:10761642-10762576
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000032132	HnRNPA1	PF11627.8	6.9e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000041885	-	849	-	ENSSTOP00000032132	282 (aa)	-	A0A287DF35

Gene Model

Click here to download ENSSTOG00000034519's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000034519's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSTOG00000034519	-	80	78.599	ENSSTOG00000006551	-	80	78.599
ENSSTOG00000034519	-	80	65.200	ENSSTOG00000020987	-	78	67.200
ENSSTOG00000034519	-	50	66.279	ENSSTOG00000033766	-	79	51.282
ENSSTOG00000034519	-	80	73.047	ENSSTOG00000025851	-	90	71.942
ENSSTOG00000034519	-	83	47.744	ENSSTOG00000025125	HNRNPA3	74	55.600
ENSSTOG00000034519	-	82	40.569	ENSSTOG00000024155	-	92	39.483
ENSSTOG00000034519	-	52	64.972	ENSSTOG00000015259	-	95	49.817
ENSSTOG00000034519	-	74	52.101	ENSSTOG00000006202	-	91	51.200
ENSSTOG00000034519	-	50	43.275	ENSSTOG00000026412	-	87	39.216

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000034519	-	73	58.650	ENSAMEG00000002186	-	85	56.327	Ailuropoda_melanoleuca
ENSSTOG00000034519	-	80	69.841	ENSCAFG00000017180	-	80	69.841	Canis_familiaris
ENSSTOG00000034519	-	80	69.498	ENSCAFG00000006327	-	80	72.973	Canis_familiaris
ENSSTOG00000034519	-	73	74.561	ENSCHIG00000020351	-	79	75.207	Capra_hircus
ENSSTOG00000034519	-	53	43.827	ENSCGRG00001017212	-	80	37.919	Cricetulus_griseus_chok1gshd
ENSSTOG00000034519	-	80	55.642	ENSDNOG00000048335	-	80	56.420	Dasypus_novemcinctus
ENSSTOG00000034519	-	80	51.695	ENSDNOG00000030945	-	75	51.695	Dasypus_novemcinctus
ENSSTOG00000034519	-	80	78.210	ENSDORG00000027821	-	80	78.210	Dipodomys_ordii
ENSSTOG00000034519	-	79	38.618	ENSETEG00000010244	-	75	41.057	Echinops_telfairi
ENSSTOG00000034519	-	50	50.000	ENSETEG00000004129	-	55	50.000	Echinops_telfairi
ENSSTOG00000034519	-	80	77.043	ENSFDAG00000021342	-	80	77.043	Fukomys_damarensis
ENSSTOG00000034519	-	80	77.043	ENSHGLG00000003139	HNRNPA1	80	77.043	Heterocephalus_glaber_female
ENSSTOG00000034519	-	76	62.195	ENSHGLG00100017719	-	82	62.400	Heterocephalus_glaber_male
ENSSTOG00000034519	-	80	77.043	ENSHGLG00100015974	HNRNPA1	80	77.043	Heterocephalus_glaber_male
ENSSTOG00000034519	-	80	46.528	ENSMNEG00000038539	-	80	47.518	Macaca_nemestrina
ENSSTOG00000034519	-	80	53.381	ENSMPUG00000003127	-	82	52.313	Mustela_putorius_furo
ENSSTOG00000034519	-	64	53.171	ENSMPUG00000008269	-	77	55.122	Mustela_putorius_furo
ENSSTOG00000034519	-	73	51.154	ENSNLEG00000032512	-	83	54.044	Nomascus_leucogenys
ENSSTOG00000034519	-	76	66.964	ENSPTIG00000013949	-	78	66.964	Panthera_tigris_altaica
ENSSTOG00000034519	-	76	51.773	ENSSFOG00015007588	-	79	51.237	Scleropages_formosus
ENSSTOG00000034519	-	75	71.369	ENSTBEG00000012511	-	84	71.369	Tupaia_belangeri
ENSSTOG00000034519	-	82	47.826	ENSTBEG00000007607	-	80	50.000	Tupaia_belangeri