EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSTOG00000034801 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Plus strand
Length: 327 bases
Position: chrJH393286.1:23517130-23517456
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000029145	LSM	PF01423.22	4.6e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000035257	-	327	-	ENSSTOP00000029145	108 (aa)	-	A0A287D6J1

Gene Model

Click here to download ENSSTOG00000034801's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000034801's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSTOG00000034801	-	81	87.500	ENSSTOG00000009039	LSM8	92	87.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000034801	-	81	87.500	ENSG00000128534	LSM8	100	86.667	Homo_sapiens
ENSSTOG00000034801	-	81	82.955	ENSAPOG00000008649	lsm8	92	82.955	Acanthochromis_polyacanthus
ENSSTOG00000034801	-	81	87.500	ENSAMEG00000001162	LSM8	92	87.500	Ailuropoda_melanoleuca
ENSSTOG00000034801	-	69	84.000	ENSACIG00000014694	lsm8	100	84.000	Amphilophus_citrinellus
ENSSTOG00000034801	-	81	82.955	ENSAOCG00000013926	lsm8	92	82.955	Amphiprion_ocellaris
ENSSTOG00000034801	-	81	82.955	ENSAPEG00000023502	lsm8	92	82.955	Amphiprion_percula
ENSSTOG00000034801	-	69	84.000	ENSATEG00000023432	lsm8	100	84.000	Anabas_testudineus
ENSSTOG00000034801	-	79	87.059	ENSAPLG00000005115	LSM8	86	87.059	Anas_platyrhynchos
ENSSTOG00000034801	-	81	87.500	ENSANAG00000027771	LSM8	100	83.784	Aotus_nancymaae
ENSSTOG00000034801	-	81	82.955	ENSACLG00000011253	lsm8	92	82.955	Astatotilapia_calliptera
ENSSTOG00000034801	-	81	85.227	ENSAMXG00000042902	lsm8	92	85.227	Astyanax_mexicanus
ENSSTOG00000034801	-	81	87.500	ENSBTAG00000012649	LSM8	92	87.500	Bos_taurus
ENSSTOG00000034801	-	77	53.012	WBGene00003082	lsm-8	85	53.012	Caenorhabditis_elegans
ENSSTOG00000034801	-	81	87.500	ENSCJAG00000046406	LSM8	100	83.784	Callithrix_jacchus
ENSSTOG00000034801	-	81	87.356	ENSCAFG00000016459	LSM8	88	87.356	Canis_familiaris
ENSSTOG00000034801	-	82	80.899	ENSCAFG00020012800	-	67	80.899	Canis_lupus_dingo
ENSSTOG00000034801	-	81	87.500	ENSCAFG00020007643	-	92	87.500	Canis_lupus_dingo
ENSSTOG00000034801	-	81	85.227	ENSCHIG00000014201	LSM8	94	85.227	Capra_hircus
ENSSTOG00000034801	-	81	87.500	ENSTSYG00000032434	LSM8	92	87.500	Carlito_syrichta
ENSSTOG00000034801	-	69	85.135	ENSCAPG00000008253	LSM8	100	85.135	Cavia_aperea
ENSSTOG00000034801	-	81	87.500	ENSCPOG00000035673	LSM8	92	87.500	Cavia_porcellus
ENSSTOG00000034801	-	81	87.500	ENSCCAG00000021329	LSM8	100	83.784	Cebus_capucinus
ENSSTOG00000034801	-	81	87.500	ENSCATG00000045302	LSM8	100	83.784	Cercocebus_atys
ENSSTOG00000034801	-	81	87.500	ENSCLAG00000003726	LSM8	92	87.500	Chinchilla_lanigera
ENSSTOG00000034801	-	81	84.091	ENSCSAG00000019007	-	92	84.091	Chlorocebus_sabaeus
ENSSTOG00000034801	-	81	87.500	ENSCSAG00000010802	-	92	87.500	Chlorocebus_sabaeus
ENSSTOG00000034801	-	79	88.235	ENSCPBG00000008154	LSM8	87	88.235	Chrysemys_picta_bellii
ENSSTOG00000034801	-	81	65.909	ENSCING00000024877	-	92	65.909	Ciona_intestinalis
ENSSTOG00000034801	-	81	87.500	ENSCANG00000040728	LSM8	100	83.784	Colobus_angolensis_palliatus
ENSSTOG00000034801	-	81	87.500	ENSCGRG00001000450	Lsm8	92	87.500	Cricetulus_griseus_chok1gshd
ENSSTOG00000034801	-	79	88.235	ENSCGRG00000005587	Lsm8	100	88.235	Cricetulus_griseus_crigri
ENSSTOG00000034801	-	67	81.944	ENSCSEG00000004164	lsm8	79	81.944	Cynoglossus_semilaevis
ENSSTOG00000034801	-	81	81.818	ENSCVAG00000020547	lsm8	92	81.818	Cyprinodon_variegatus
ENSSTOG00000034801	-	81	81.818	ENSDARG00000091656	lsm8	92	81.818	Danio_rerio
ENSSTOG00000034801	-	81	87.500	ENSDNOG00000034613	LSM8	92	87.500	Dasypus_novemcinctus
ENSSTOG00000034801	-	81	87.500	ENSDORG00000027868	Lsm8	92	87.500	Dipodomys_ordii
ENSSTOG00000034801	-	81	63.636	FBgn0035271	CG2021	93	63.636	Drosophila_melanogaster
ENSSTOG00000034801	-	81	86.364	ENSETEG00000011594	LSM8	92	86.364	Echinops_telfairi
ENSSTOG00000034801	-	69	79.730	ENSEBUG00000012017	lsm8	100	79.730	Eptatretus_burgeri
ENSSTOG00000034801	-	81	87.500	ENSEASG00005008932	LSM8	57	87.500	Equus_asinus_asinus
ENSSTOG00000034801	-	81	85.227	ENSECAG00000024025	LSM8	80	85.227	Equus_caballus
ENSSTOG00000034801	-	81	81.818	ENSELUG00000010138	lsm8	92	81.818	Esox_lucius
ENSSTOG00000034801	-	81	87.500	ENSFCAG00000036620	-	92	87.500	Felis_catus
ENSSTOG00000034801	-	72	67.949	ENSFCAG00000044794	-	79	67.949	Felis_catus
ENSSTOG00000034801	-	81	86.364	ENSFALG00000010023	LSM8	92	86.364	Ficedula_albicollis
ENSSTOG00000034801	-	81	87.500	ENSFDAG00000019530	LSM8	92	87.500	Fukomys_damarensis
ENSSTOG00000034801	-	81	82.955	ENSFHEG00000013729	lsm8	92	82.955	Fundulus_heteroclitus
ENSSTOG00000034801	-	81	86.364	ENSGALG00000009110	LSM8	92	86.364	Gallus_gallus
ENSSTOG00000034801	-	81	81.818	ENSGAFG00000001135	lsm8	92	81.818	Gambusia_affinis
ENSSTOG00000034801	-	81	87.500	ENSGAGG00000017366	LSM8	92	87.500	Gopherus_agassizii
ENSSTOG00000034801	-	81	87.500	ENSGGOG00000041883	LSM8	92	87.500	Gorilla_gorilla
ENSSTOG00000034801	-	81	82.955	ENSHBUG00000003646	lsm8	92	82.955	Haplochromis_burtoni
ENSSTOG00000034801	-	81	81.818	ENSHGLG00000019782	-	92	81.818	Heterocephalus_glaber_female
ENSSTOG00000034801	-	56	86.667	ENSHGLG00000001988	-	87	86.667	Heterocephalus_glaber_female
ENSSTOG00000034801	-	81	85.227	ENSHGLG00100012166	-	92	85.227	Heterocephalus_glaber_male
ENSSTOG00000034801	-	81	86.207	ENSHGLG00100003934	-	87	86.207	Heterocephalus_glaber_male
ENSSTOG00000034801	-	81	81.818	ENSHCOG00000005037	lsm8	92	81.818	Hippocampus_comes
ENSSTOG00000034801	-	81	85.227	ENSIPUG00000019811	NAA38	92	85.227	Ictalurus_punctatus
ENSSTOG00000034801	-	81	87.500	ENSJJAG00000009031	Lsm8	91	87.500	Jaculus_jaculus
ENSSTOG00000034801	-	81	82.955	ENSKMAG00000018983	lsm8	92	82.955	Kryptolebias_marmoratus
ENSSTOG00000034801	-	81	82.955	ENSLACG00000010231	LSM8	92	82.955	Latimeria_chalumnae
ENSSTOG00000034801	-	81	84.091	ENSLOCG00000015580	lsm8	92	84.091	Lepisosteus_oculatus
ENSSTOG00000034801	-	79	88.235	ENSLAFG00000011242	LSM8	88	88.235	Loxodonta_africana
ENSSTOG00000034801	-	81	82.955	ENSMFAG00000013044	-	92	82.955	Macaca_fascicularis
ENSSTOG00000034801	-	81	87.500	ENSMFAG00000035798	LSM8	100	83.784	Macaca_fascicularis
ENSSTOG00000034801	-	81	87.500	ENSMMUG00000046401	LSM8	100	83.784	Macaca_mulatta
ENSSTOG00000034801	-	81	87.500	ENSMNEG00000036764	-	100	83.784	Macaca_nemestrina
ENSSTOG00000034801	-	69	82.667	ENSMNEG00000011141	-	100	82.667	Macaca_nemestrina
ENSSTOG00000034801	-	81	72.727	ENSMLEG00000039324	-	91	72.727	Mandrillus_leucophaeus
ENSSTOG00000034801	-	81	87.500	ENSMLEG00000035828	-	100	83.784	Mandrillus_leucophaeus
ENSSTOG00000034801	-	69	84.000	ENSMAMG00000018839	lsm8	100	84.000	Mastacembelus_armatus
ENSSTOG00000034801	-	81	82.955	ENSMZEG00005019138	lsm8	92	82.955	Maylandia_zebra
ENSSTOG00000034801	-	81	86.364	ENSMGAG00000008808	LSM8	92	86.364	Meleagris_gallopavo
ENSSTOG00000034801	-	75	86.420	ENSMAUG00000015721	-	85	86.420	Mesocricetus_auratus
ENSSTOG00000034801	-	67	79.167	ENSMAUG00000020287	-	100	77.027	Mesocricetus_auratus
ENSSTOG00000034801	-	81	69.318	ENSMAUG00000015356	-	91	69.318	Mesocricetus_auratus
ENSSTOG00000034801	-	81	87.500	ENSMICG00000042730	LSM8	92	87.500	Microcebus_murinus
ENSSTOG00000034801	-	81	87.500	ENSMOCG00000001688	Lsm8	92	87.500	Microtus_ochrogaster
ENSSTOG00000034801	-	69	84.000	ENSMMOG00000006046	lsm8	100	84.000	Mola_mola
ENSSTOG00000034801	-	58	88.889	ENSMODG00000015729	LSM8	81	88.889	Monodelphis_domestica
ENSSTOG00000034801	-	81	84.091	ENSMALG00000000405	lsm8	92	84.091	Monopterus_albus
ENSSTOG00000034801	-	81	87.500	MGP_CAROLIEiJ_G0028125	-	92	87.500	Mus_caroli
ENSSTOG00000034801	-	81	87.500	ENSMUSG00000044155	Lsm8	92	87.500	Mus_musculus
ENSSTOG00000034801	-	81	87.500	MGP_PahariEiJ_G0021881	Lsm8	100	86.667	Mus_pahari
ENSSTOG00000034801	-	81	87.500	MGP_SPRETEiJ_G0029125	-	92	87.500	Mus_spretus
ENSSTOG00000034801	-	81	87.500	ENSMLUG00000006837	-	92	87.500	Myotis_lucifugus
ENSSTOG00000034801	-	81	86.364	ENSMLUG00000027762	-	92	86.364	Myotis_lucifugus
ENSSTOG00000034801	-	81	87.500	ENSNGAG00000016554	Lsm8	92	87.500	Nannospalax_galili
ENSSTOG00000034801	-	81	82.955	ENSNBRG00000014441	lsm8	92	82.955	Neolamprologus_brichardi
ENSSTOG00000034801	-	81	87.500	ENSNLEG00000011768	LSM8	92	87.500	Nomascus_leucogenys
ENSSTOG00000034801	-	81	77.273	ENSMEUG00000007801	LSM8	92	77.273	Notamacropus_eugenii
ENSSTOG00000034801	-	79	88.235	ENSOPRG00000014809	LSM8	100	88.235	Ochotona_princeps
ENSSTOG00000034801	-	72	78.205	ENSODEG00000020290	-	91	78.205	Octodon_degus
ENSSTOG00000034801	-	81	87.500	ENSODEG00000000418	-	92	87.500	Octodon_degus
ENSSTOG00000034801	-	81	87.500	ENSOANG00000014536	LSM8	92	87.500	Ornithorhynchus_anatinus
ENSSTOG00000034801	-	79	88.235	ENSOCUG00000017359	LSM8	88	88.235	Oryctolagus_cuniculus
ENSSTOG00000034801	-	81	72.727	ENSORLG00000017432	lsm8	91	72.727	Oryzias_latipes
ENSSTOG00000034801	-	81	72.727	ENSORLG00020004376	lsm8	91	72.727	Oryzias_latipes_hni
ENSSTOG00000034801	-	81	82.955	ENSORLG00015003757	lsm8	92	82.955	Oryzias_latipes_hsok
ENSSTOG00000034801	-	64	82.609	ENSOMEG00000022509	lsm8	83	80.000	Oryzias_melastigma
ENSSTOG00000034801	-	81	87.500	ENSOGAG00000013377	LSM8	92	87.500	Otolemur_garnettii
ENSSTOG00000034801	-	81	87.500	ENSOARG00000017974	LSM8	92	87.500	Ovis_aries
ENSSTOG00000034801	-	69	86.667	ENSPPAG00000043228	-	100	86.667	Pan_paniscus
ENSSTOG00000034801	-	81	87.500	ENSPPRG00000006444	LSM8	92	87.500	Panthera_pardus
ENSSTOG00000034801	-	81	87.500	ENSPTIG00000004722	LSM8	92	87.500	Panthera_tigris_altaica
ENSSTOG00000034801	-	69	86.667	ENSPTRG00000046596	-	100	86.667	Pan_troglodytes
ENSSTOG00000034801	-	81	80.682	ENSPANG00000019395	-	92	80.682	Papio_anubis
ENSSTOG00000034801	-	81	87.500	ENSPANG00000035470	-	100	83.784	Papio_anubis
ENSSTOG00000034801	-	79	85.882	ENSPKIG00000006092	lsm8	86	85.882	Paramormyrops_kingsleyae
ENSSTOG00000034801	-	69	86.667	ENSPSIG00000017054	LSM8	100	86.667	Pelodiscus_sinensis
ENSSTOG00000034801	-	69	84.000	ENSPMGG00000016442	lsm8	100	84.000	Periophthalmus_magnuspinnatus
ENSSTOG00000034801	-	69	83.784	ENSPEMG00000009153	Lsm8	100	83.784	Peromyscus_maniculatus_bairdii
ENSSTOG00000034801	-	77	89.157	ENSPCIG00000021467	LSM8	87	89.157	Phascolarctos_cinereus
ENSSTOG00000034801	-	81	81.818	ENSPFOG00000012340	lsm8	92	81.818	Poecilia_formosa
ENSSTOG00000034801	-	79	82.353	ENSPLAG00000000516	lsm8	89	82.353	Poecilia_latipinna
ENSSTOG00000034801	-	81	81.818	ENSPMEG00000022567	lsm8	92	81.818	Poecilia_mexicana
ENSSTOG00000034801	-	68	72.500	ENSPREG00000005527	lsm8	72	72.500	Poecilia_reticulata
ENSSTOG00000034801	-	81	87.500	ENSPPYG00000017942	LSM8	92	87.500	Pongo_abelii
ENSSTOG00000034801	-	81	87.500	ENSPCOG00000003309	-	92	87.500	Propithecus_coquereli
ENSSTOG00000034801	-	81	66.667	ENSPCOG00000017982	-	90	66.667	Propithecus_coquereli
ENSSTOG00000034801	-	79	87.059	ENSPVAG00000000990	LSM8	100	87.059	Pteropus_vampyrus
ENSSTOG00000034801	-	81	82.955	ENSPNYG00000011448	lsm8	92	82.955	Pundamilia_nyererei
ENSSTOG00000034801	-	81	85.227	ENSPNAG00000010252	lsm8	92	85.227	Pygocentrus_nattereri
ENSSTOG00000034801	-	81	87.500	ENSRNOG00000058677	Lsm8	92	87.500	Rattus_norvegicus
ENSSTOG00000034801	-	81	87.500	ENSRBIG00000032851	LSM8	100	83.784	Rhinopithecus_bieti
ENSSTOG00000034801	-	81	87.500	ENSRROG00000039618	LSM8	100	83.784	Rhinopithecus_roxellana
ENSSTOG00000034801	-	81	87.500	ENSSBOG00000023223	LSM8	100	83.784	Saimiri_boliviensis_boliviensis
ENSSTOG00000034801	-	81	87.500	ENSSHAG00000018435	-	92	87.500	Sarcophilus_harrisii
ENSSTOG00000034801	-	81	81.818	ENSSFOG00015004412	lsm8	92	81.818	Scleropages_formosus
ENSSTOG00000034801	-	69	84.000	ENSSMAG00000009458	lsm8	100	84.000	Scophthalmus_maximus
ENSSTOG00000034801	-	81	82.955	ENSSDUG00000014702	lsm8	92	82.955	Seriola_dumerili
ENSSTOG00000034801	-	69	84.000	ENSSLDG00000016870	lsm8	100	84.000	Seriola_lalandi_dorsalis
ENSSTOG00000034801	-	67	86.111	ENSSARG00000009628	-	100	86.111	Sorex_araneus
ENSSTOG00000034801	-	81	87.500	ENSSPUG00000017419	LSM8	92	87.500	Sphenodon_punctatus
ENSSTOG00000034801	-	81	82.955	ENSSPAG00000021422	lsm8	92	82.955	Stegastes_partitus
ENSSTOG00000034801	-	81	87.500	ENSSSCG00000021652	LSM8	92	87.500	Sus_scrofa
ENSSTOG00000034801	-	81	86.364	ENSTGUG00000004730	-	92	86.364	Taeniopygia_guttata
ENSSTOG00000034801	-	81	85.227	ENSTGUG00000016823	-	92	85.227	Taeniopygia_guttata
ENSSTOG00000034801	-	81	82.955	ENSTRUG00000025192	lsm8	92	82.955	Takifugu_rubripes
ENSSTOG00000034801	-	81	82.955	ENSTNIG00000002864	lsm8	92	82.955	Tetraodon_nigroviridis
ENSSTOG00000034801	-	81	87.500	ENSTTRG00000001023	LSM8	92	87.500	Tursiops_truncatus
ENSSTOG00000034801	-	81	85.227	ENSUAMG00000006943	-	92	85.227	Ursus_americanus
ENSSTOG00000034801	-	81	85.227	ENSUMAG00000003073	LSM8	94	85.227	Ursus_maritimus
ENSSTOG00000034801	-	81	87.500	ENSVPAG00000001530	LSM8	92	87.500	Vicugna_pacos
ENSSTOG00000034801	-	69	84.000	ENSVVUG00000013248	-	82	84.000	Vulpes_vulpes
ENSSTOG00000034801	-	81	84.091	ENSXETG00000021829	lsm8	91	84.091	Xenopus_tropicalis
ENSSTOG00000034801	-	80	80.233	ENSXCOG00000012938	lsm8	90	80.233	Xiphophorus_couchianus
ENSSTOG00000034801	-	81	81.818	ENSXMAG00000025919	lsm8	92	81.818	Xiphophorus_maculatus