EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTBEG00000000176 (Gene tree)
Gene ID: -
Gene Symbol: RPUSD3
Alias: MGC29784
Full Name: RNA pseudouridine synthase D3
Gene Type: protein_coding
Species: Tupaia_belangeri
Status: putative
Strand: Minus strand
Length: 4608 bases
Position: chrGeneScaffold_4402:87160-91767
Accession: 28437
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTBEP00000000151	PseudoU_synth_2	PF00849.22	1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTBET00000000178	RPUSD3-201	864	-	ENSTBEP00000000151	288 (aa)	-	UPI0000F5DE2B

Gene Model

Click here to download ENSTBEG00000000176's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTBEG00000000176's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTBEG00000000176	RPUSD3	100	77.509	ENSG00000156990	RPUSD3	95	79.703	Homo_sapiens
ENSTBEG00000000176	RPUSD3	100	75.779	ENSAMEG00000016227	RPUSD3	82	75.779	Ailuropoda_melanoleuca
ENSTBEG00000000176	RPUSD3	76	53.182	ENSACAG00000009836	RPUSD3	62	53.182	Anolis_carolinensis
ENSTBEG00000000176	RPUSD3	68	78.680	ENSANAG00000019945	-	79	78.680	Aotus_nancymaae
ENSTBEG00000000176	RPUSD3	95	56.794	ENSANAG00000007127	-	98	55.903	Aotus_nancymaae
ENSTBEG00000000176	RPUSD3	65	77.419	ENSANAG00000038118	-	89	77.419	Aotus_nancymaae
ENSTBEG00000000176	RPUSD3	97	77.224	ENSBTAG00000007968	RPUSD3	82	77.224	Bos_taurus
ENSTBEG00000000176	RPUSD3	100	74.394	ENSCAFG00000029733	RPUSD3	82	74.394	Canis_familiaris
ENSTBEG00000000176	RPUSD3	100	74.394	ENSCAFG00020008582	RPUSD3	82	74.394	Canis_lupus_dingo
ENSTBEG00000000176	RPUSD3	97	76.868	ENSCHIG00000026027	RPUSD3	81	76.868	Capra_hircus
ENSTBEG00000000176	RPUSD3	94	71.480	ENSTSYG00000009994	RPUSD3	94	70.874	Carlito_syrichta
ENSTBEG00000000176	RPUSD3	69	78.000	ENSCAPG00000017559	RPUSD3	95	72.464	Cavia_aperea
ENSTBEG00000000176	RPUSD3	93	65.926	ENSCPOG00000037956	RPUSD3	70	66.667	Cavia_porcellus
ENSTBEG00000000176	RPUSD3	100	75.862	ENSCCAG00000029530	RPUSD3	95	80.198	Cebus_capucinus
ENSTBEG00000000176	RPUSD3	100	77.855	ENSCATG00000036939	RPUSD3	95	81.188	Cercocebus_atys
ENSTBEG00000000176	RPUSD3	100	78.201	ENSCSAG00000010506	RPUSD3	82	78.201	Chlorocebus_sabaeus
ENSTBEG00000000176	RPUSD3	65	54.737	ENSCPBG00000008825	RPUSD3	62	55.828	Chrysemys_picta_bellii
ENSTBEG00000000176	RPUSD3	100	78.201	ENSCANG00000040711	RPUSD3	95	81.683	Colobus_angolensis_palliatus
ENSTBEG00000000176	RPUSD3	98	73.145	ENSCGRG00001004923	Rpusd3	78	73.145	Cricetulus_griseus_chok1gshd
ENSTBEG00000000176	RPUSD3	94	74.545	ENSCGRG00000018315	Rpusd3	80	74.545	Cricetulus_griseus_crigri
ENSTBEG00000000176	RPUSD3	100	71.626	ENSDNOG00000039160	RPUSD3	76	71.626	Dasypus_novemcinctus
ENSTBEG00000000176	RPUSD3	69	73.077	ENSDORG00000026827	Rpusd3	71	73.077	Dipodomys_ordii
ENSTBEG00000000176	RPUSD3	99	70.877	ENSETEG00000006538	RPUSD3	81	70.877	Echinops_telfairi
ENSTBEG00000000176	RPUSD3	70	37.379	ENSEBUG00000015605	RPUSD3	67	35.610	Eptatretus_burgeri
ENSTBEG00000000176	RPUSD3	100	76.471	ENSEASG00005014160	RPUSD3	80	76.471	Equus_asinus_asinus
ENSTBEG00000000176	RPUSD3	100	76.471	ENSECAG00000019988	RPUSD3	80	76.471	Equus_caballus
ENSTBEG00000000176	RPUSD3	100	56.610	ENSEEUG00000007353	RPUSD3	82	56.849	Erinaceus_europaeus
ENSTBEG00000000176	RPUSD3	100	76.471	ENSFCAG00000014199	RPUSD3	82	76.471	Felis_catus
ENSTBEG00000000176	RPUSD3	73	49.296	ENSFALG00000012968	RPUSD3	79	49.296	Ficedula_albicollis
ENSTBEG00000000176	RPUSD3	70	77.723	ENSFDAG00000008350	RPUSD3	62	77.723	Fukomys_damarensis
ENSTBEG00000000176	RPUSD3	70	55.665	ENSGAGG00000007493	RPUSD3	65	55.665	Gopherus_agassizii
ENSTBEG00000000176	RPUSD3	100	77.163	ENSGGOG00000013120	RPUSD3	95	80.198	Gorilla_gorilla
ENSTBEG00000000176	RPUSD3	97	60.123	ENSHGLG00000011722	RPUSD3	84	59.816	Heterocephalus_glaber_female
ENSTBEG00000000176	RPUSD3	97	60.123	ENSHGLG00100016038	RPUSD3	84	59.816	Heterocephalus_glaber_male
ENSTBEG00000000176	RPUSD3	100	74.048	ENSSTOG00000002125	RPUSD3	82	74.048	Ictidomys_tridecemlineatus
ENSTBEG00000000176	RPUSD3	94	69.314	ENSJJAG00000012679	Rpusd3	91	68.953	Jaculus_jaculus
ENSTBEG00000000176	RPUSD3	94	77.656	ENSLAFG00000017501	RPUSD3	79	77.656	Loxodonta_africana
ENSTBEG00000000176	RPUSD3	100	77.509	ENSMFAG00000032407	RPUSD3	82	77.509	Macaca_fascicularis
ENSTBEG00000000176	RPUSD3	100	73.356	ENSMMUG00000010628	RPUSD3	90	81.188	Macaca_mulatta
ENSTBEG00000000176	RPUSD3	100	77.855	ENSMNEG00000040308	RPUSD3	82	77.855	Macaca_nemestrina
ENSTBEG00000000176	RPUSD3	100	77.855	ENSMLEG00000033940	RPUSD3	95	81.683	Mandrillus_leucophaeus
ENSTBEG00000000176	RPUSD3	95	73.477	ENSMAUG00000015473	Rpusd3	95	73.477	Mesocricetus_auratus
ENSTBEG00000000176	RPUSD3	97	75.801	ENSMICG00000002315	RPUSD3	93	79.104	Microcebus_murinus
ENSTBEG00000000176	RPUSD3	97	71.886	ENSMOCG00000022613	Rpusd3	82	71.886	Microtus_ochrogaster
ENSTBEG00000000176	RPUSD3	95	54.480	ENSMODG00000005210	RPUSD3	73	54.480	Monodelphis_domestica
ENSTBEG00000000176	RPUSD3	97	72.954	MGP_CAROLIEiJ_G0028725	Rpusd3	99	72.527	Mus_caroli
ENSTBEG00000000176	RPUSD3	97	73.310	ENSMUSG00000051169	Rpusd3	98	72.527	Mus_musculus
ENSTBEG00000000176	RPUSD3	97	72.954	MGP_PahariEiJ_G0022476	Rpusd3	99	71.739	Mus_pahari
ENSTBEG00000000176	RPUSD3	97	72.598	MGP_SPRETEiJ_G0029753	Rpusd3	99	72.161	Mus_spretus
ENSTBEG00000000176	RPUSD3	100	72.318	ENSMPUG00000017132	RPUSD3	82	72.318	Mustela_putorius_furo
ENSTBEG00000000176	RPUSD3	98	77.739	ENSMLUG00000006135	RPUSD3	81	77.739	Myotis_lucifugus
ENSTBEG00000000176	RPUSD3	94	72.161	ENSNGAG00000023704	Rpusd3	79	72.161	Nannospalax_galili
ENSTBEG00000000176	RPUSD3	88	75.397	ENSNLEG00000004214	RPUSD3	95	81.683	Nomascus_leucogenys
ENSTBEG00000000176	RPUSD3	69	65.174	ENSMEUG00000013098	-	78	65.174	Notamacropus_eugenii
ENSTBEG00000000176	RPUSD3	94	59.273	ENSOPRG00000002300	RPUSD3	78	59.273	Ochotona_princeps
ENSTBEG00000000176	RPUSD3	69	76.119	ENSODEG00000018137	RPUSD3	69	76.119	Octodon_degus
ENSTBEG00000000176	RPUSD3	75	47.465	ENSOANG00000012081	-	76	47.465	Ornithorhynchus_anatinus
ENSTBEG00000000176	RPUSD3	86	67.717	ENSOCUG00000027885	RPUSD3	71	68.800	Oryctolagus_cuniculus
ENSTBEG00000000176	RPUSD3	87	79.681	ENSOGAG00000012592	RPUSD3	80	79.681	Otolemur_garnettii
ENSTBEG00000000176	RPUSD3	99	77.083	ENSOARG00000005928	RPUSD3	82	77.083	Ovis_aries
ENSTBEG00000000176	RPUSD3	100	77.855	ENSPPAG00000038083	RPUSD3	95	80.693	Pan_paniscus
ENSTBEG00000000176	RPUSD3	100	77.163	ENSPPRG00000024433	RPUSD3	82	77.163	Panthera_pardus
ENSTBEG00000000176	RPUSD3	97	78.648	ENSPTIG00000006828	RPUSD3	82	78.648	Panthera_tigris_altaica
ENSTBEG00000000176	RPUSD3	100	77.509	ENSPTRG00000051760	RPUSD3	95	80.198	Pan_troglodytes
ENSTBEG00000000176	RPUSD3	100	78.201	ENSPANG00000023885	RPUSD3	95	81.683	Papio_anubis
ENSTBEG00000000176	RPUSD3	94	74.368	ENSPEMG00000017245	Rpusd3	81	74.368	Peromyscus_maniculatus_bairdii
ENSTBEG00000000176	RPUSD3	79	64.912	ENSPCIG00000021901	RPUSD3	67	64.912	Phascolarctos_cinereus
ENSTBEG00000000176	RPUSD3	100	77.163	ENSPPYG00000013676	RPUSD3	82	77.163	Pongo_abelii
ENSTBEG00000000176	RPUSD3	100	59.170	ENSPCAG00000013731	-	100	59.170	Procavia_capensis
ENSTBEG00000000176	RPUSD3	100	78.893	ENSPCOG00000018314	RPUSD3	82	78.893	Propithecus_coquereli
ENSTBEG00000000176	RPUSD3	100	77.163	ENSPVAG00000011107	RPUSD3	82	77.163	Pteropus_vampyrus
ENSTBEG00000000176	RPUSD3	95	66.909	ENSRNOG00000009084	Rpusd3	78	66.909	Rattus_norvegicus
ENSTBEG00000000176	RPUSD3	100	79.239	ENSRBIG00000041230	RPUSD3	95	82.673	Rhinopithecus_bieti
ENSTBEG00000000176	RPUSD3	100	79.239	ENSRROG00000043328	RPUSD3	95	82.673	Rhinopithecus_roxellana
ENSTBEG00000000176	RPUSD3	100	74.828	ENSSBOG00000036106	RPUSD3	82	74.828	Saimiri_boliviensis_boliviensis
ENSTBEG00000000176	RPUSD3	86	58.871	ENSSHAG00000015536	RPUSD3	80	58.871	Sarcophilus_harrisii
ENSTBEG00000000176	RPUSD3	100	75.087	ENSSSCG00000011555	RPUSD3	82	75.087	Sus_scrofa
ENSTBEG00000000176	RPUSD3	69	51.244	ENSTGUG00000008744	RPUSD3	86	51.244	Taeniopygia_guttata
ENSTBEG00000000176	RPUSD3	100	75.087	ENSTTRG00000007544	RPUSD3	82	75.087	Tursiops_truncatus
ENSTBEG00000000176	RPUSD3	87	79.681	ENSUAMG00000011354	RPUSD3	78	79.681	Ursus_americanus
ENSTBEG00000000176	RPUSD3	100	77.163	ENSUMAG00000018830	RPUSD3	82	77.163	Ursus_maritimus
ENSTBEG00000000176	RPUSD3	97	75.801	ENSVVUG00000023735	RPUSD3	90	74.038	Vulpes_vulpes
ENSTBEG00000000176	RPUSD3	76	49.321	ENSXETG00000023546	rpusd3	77	49.321	Xenopus_tropicalis