EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTBEG00000000725 (Gene tree)
Gene ID: -
Gene Symbol: PRPF38A
Alias: FLJ14936|Prp38
Full Name: pre-mRNA processing factor 38A
Gene Type: protein_coding
Species: Tupaia_belangeri
Status: putative
Strand: Plus strand
Length: 14507 bases
Position: chrGeneScaffold_3506:352311-366817
Accession: 25930
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTBEP00000000633	PRP38	PF03371.15	7.9e-63	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTBET00000000729	PRPF38A-201	939	-	ENSTBEP00000000633	312 (aa)	-	UPI0000F6090C

Gene Model

Click here to download ENSTBEG00000000725's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTBEG00000000725's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTBEG00000000725	PRPF38A	100	99.359	ENSG00000134748	PRPF38A	100	99.359	Homo_sapiens
ENSTBEG00000000725	PRPF38A	71	88.688	ENSAPOG00000011652	prpf38a	100	81.150	Acanthochromis_polyacanthus
ENSTBEG00000000725	PRPF38A	100	99.359	ENSAMEG00000009319	PRPF38A	100	99.359	Ailuropoda_melanoleuca
ENSTBEG00000000725	PRPF38A	71	86.425	ENSACIG00000012292	prpf38a	76	85.714	Amphilophus_citrinellus
ENSTBEG00000000725	PRPF38A	71	88.688	ENSAOCG00000018004	prpf38a	100	81.150	Amphiprion_ocellaris
ENSTBEG00000000725	PRPF38A	71	88.688	ENSAPEG00000021414	prpf38a	100	81.150	Amphiprion_percula
ENSTBEG00000000725	PRPF38A	71	89.140	ENSATEG00000004608	prpf38a	100	81.150	Anabas_testudineus
ENSTBEG00000000725	PRPF38A	79	96.761	ENSAPLG00000005827	PRPF38A	99	96.761	Anas_platyrhynchos
ENSTBEG00000000725	PRPF38A	100	95.192	ENSACAG00000008249	PRPF38A	100	95.192	Anolis_carolinensis
ENSTBEG00000000725	PRPF38A	100	67.089	ENSANAG00000029204	-	100	61.709	Aotus_nancymaae
ENSTBEG00000000725	PRPF38A	100	99.359	ENSANAG00000027839	PRPF38A	100	99.359	Aotus_nancymaae
ENSTBEG00000000725	PRPF38A	71	86.425	ENSACLG00000021595	prpf38a	100	79.553	Astatotilapia_calliptera
ENSTBEG00000000725	PRPF38A	100	81.789	ENSAMXG00000029274	prpf38a	100	81.789	Astyanax_mexicanus
ENSTBEG00000000725	PRPF38A	100	99.359	ENSBTAG00000002720	PRPF38A	100	99.359	Bos_taurus
ENSTBEG00000000725	PRPF38A	63	62.564	WBGene00008380	prp-38	67	61.574	Caenorhabditis_elegans
ENSTBEG00000000725	PRPF38A	100	99.359	ENSCJAG00000021594	PRPF38A	100	99.359	Callithrix_jacchus
ENSTBEG00000000725	PRPF38A	100	99.359	ENSCAFG00000003740	PRPF38A	100	99.359	Canis_familiaris
ENSTBEG00000000725	PRPF38A	100	99.359	ENSCAFG00020010939	PRPF38A	100	99.359	Canis_lupus_dingo
ENSTBEG00000000725	PRPF38A	100	99.359	ENSCHIG00000024730	PRPF38A	100	99.359	Capra_hircus
ENSTBEG00000000725	PRPF38A	100	99.359	ENSTSYG00000009868	-	100	99.359	Carlito_syrichta
ENSTBEG00000000725	PRPF38A	86	98.141	ENSTSYG00000031994	-	95	98.141	Carlito_syrichta
ENSTBEG00000000725	PRPF38A	100	99.359	ENSCPOG00000005079	PRPF38A	100	99.359	Cavia_porcellus
ENSTBEG00000000725	PRPF38A	100	99.038	ENSCCAG00000026502	PRPF38A	100	99.038	Cebus_capucinus
ENSTBEG00000000725	PRPF38A	100	99.359	ENSCATG00000032296	PRPF38A	100	99.359	Cercocebus_atys
ENSTBEG00000000725	PRPF38A	100	63.782	ENSCATG00000044190	-	100	62.500	Cercocebus_atys
ENSTBEG00000000725	PRPF38A	100	99.359	ENSCLAG00000005816	PRPF38A	100	99.359	Chinchilla_lanigera
ENSTBEG00000000725	PRPF38A	78	97.917	ENSCHOG00000008388	PRPF38A	77	97.917	Choloepus_hoffmanni
ENSTBEG00000000725	PRPF38A	100	97.436	ENSCPBG00000014791	PRPF38A	100	97.436	Chrysemys_picta_bellii
ENSTBEG00000000725	PRPF38A	67	71.429	ENSCSAVG00000009580	-	78	65.678	Ciona_savignyi
ENSTBEG00000000725	PRPF38A	96	100.000	ENSCANG00000032608	PRPF38A	100	100.000	Colobus_angolensis_palliatus
ENSTBEG00000000725	PRPF38A	74	84.848	ENSCGRG00001002557	-	78	84.848	Cricetulus_griseus_chok1gshd
ENSTBEG00000000725	PRPF38A	100	99.038	ENSCGRG00001018502	-	100	99.038	Cricetulus_griseus_chok1gshd
ENSTBEG00000000725	PRPF38A	100	99.038	ENSCGRG00000014868	Prpf38a	100	99.038	Cricetulus_griseus_crigri
ENSTBEG00000000725	PRPF38A	71	87.783	ENSCSEG00000001269	prpf38a	79	87.013	Cynoglossus_semilaevis
ENSTBEG00000000725	PRPF38A	71	90.498	ENSCVAG00000012305	prpf38a	100	81.789	Cyprinodon_variegatus
ENSTBEG00000000725	PRPF38A	100	81.150	ENSDARG00000039213	prpf38a	100	81.150	Danio_rerio
ENSTBEG00000000725	PRPF38A	100	99.359	ENSDNOG00000042326	PRPF38A	100	99.359	Dasypus_novemcinctus
ENSTBEG00000000725	PRPF38A	84	83.270	ENSDORG00000025371	-	78	87.665	Dipodomys_ordii
ENSTBEG00000000725	PRPF38A	84	83.270	ENSDORG00000023691	-	78	87.665	Dipodomys_ordii
ENSTBEG00000000725	PRPF38A	100	85.897	ENSDORG00000023857	-	100	85.897	Dipodomys_ordii
ENSTBEG00000000725	PRPF38A	63	75.635	FBgn0050342	Prp38	57	76.596	Drosophila_melanogaster
ENSTBEG00000000725	PRPF38A	76	81.092	ENSEBUG00000012588	prpf38a	75	81.116	Eptatretus_burgeri
ENSTBEG00000000725	PRPF38A	100	99.359	ENSEASG00005014427	PRPF38A	100	99.359	Equus_asinus_asinus
ENSTBEG00000000725	PRPF38A	100	99.359	ENSECAG00000022628	PRPF38A	100	99.359	Equus_caballus
ENSTBEG00000000725	PRPF38A	71	86.878	ENSELUG00000021094	prpf38a	100	79.872	Esox_lucius
ENSTBEG00000000725	PRPF38A	100	99.359	ENSFCAG00000002518	PRPF38A	100	99.359	Felis_catus
ENSTBEG00000000725	PRPF38A	99	84.566	ENSFALG00000003612	-	77	90.043	Ficedula_albicollis
ENSTBEG00000000725	PRPF38A	87	95.941	ENSFALG00000005598	-	100	95.941	Ficedula_albicollis
ENSTBEG00000000725	PRPF38A	100	99.038	ENSFDAG00000011287	PRPF38A	100	99.038	Fukomys_damarensis
ENSTBEG00000000725	PRPF38A	84	78.788	ENSFHEG00000014317	prpf38a	78	88.745	Fundulus_heteroclitus
ENSTBEG00000000725	PRPF38A	53	94.578	ENSGMOG00000011384	prpf38a	54	94.578	Gadus_morhua
ENSTBEG00000000725	PRPF38A	100	97.115	ENSGALG00000010627	PRPF38A	100	97.115	Gallus_gallus
ENSTBEG00000000725	PRPF38A	71	90.498	ENSGAFG00000012422	prpf38a	100	81.789	Gambusia_affinis
ENSTBEG00000000725	PRPF38A	71	86.099	ENSGACG00000005423	prpf38a	100	78.730	Gasterosteus_aculeatus
ENSTBEG00000000725	PRPF38A	100	97.756	ENSGAGG00000020547	PRPF38A	100	97.756	Gopherus_agassizii
ENSTBEG00000000725	PRPF38A	100	99.359	ENSGGOG00000003940	PRPF38A	100	99.359	Gorilla_gorilla
ENSTBEG00000000725	PRPF38A	61	91.005	ENSHBUG00000020572	prpf38a	80	90.957	Haplochromis_burtoni
ENSTBEG00000000725	PRPF38A	100	83.013	ENSHGLG00000007918	-	100	82.692	Heterocephalus_glaber_female
ENSTBEG00000000725	PRPF38A	100	99.359	ENSHGLG00000000475	PRPF38A	100	99.359	Heterocephalus_glaber_female
ENSTBEG00000000725	PRPF38A	100	83.013	ENSHGLG00100003928	-	100	82.692	Heterocephalus_glaber_male
ENSTBEG00000000725	PRPF38A	100	99.359	ENSHGLG00100008935	PRPF38A	100	99.359	Heterocephalus_glaber_male
ENSTBEG00000000725	PRPF38A	87	69.373	ENSHCOG00000020781	prpf38a	59	90.957	Hippocampus_comes
ENSTBEG00000000725	PRPF38A	74	87.500	ENSIPUG00000005757	prpf38a	75	87.500	Ictalurus_punctatus
ENSTBEG00000000725	PRPF38A	100	99.359	ENSSTOG00000015610	PRPF38A	100	99.359	Ictidomys_tridecemlineatus
ENSTBEG00000000725	PRPF38A	100	98.077	ENSJJAG00000015811	Prpf38a	100	98.077	Jaculus_jaculus
ENSTBEG00000000725	PRPF38A	71	90.045	ENSKMAG00000006588	prpf38a	100	81.470	Kryptolebias_marmoratus
ENSTBEG00000000725	PRPF38A	96	79.195	ENSLBEG00000020585	prpf38a	100	78.914	Labrus_bergylta
ENSTBEG00000000725	PRPF38A	100	91.667	ENSLACG00000011495	PRPF38A	100	91.667	Latimeria_chalumnae
ENSTBEG00000000725	PRPF38A	100	79.553	ENSLOCG00000006262	prpf38a	100	80.831	Lepisosteus_oculatus
ENSTBEG00000000725	PRPF38A	100	99.359	ENSLAFG00000025862	PRPF38A	100	99.359	Loxodonta_africana
ENSTBEG00000000725	PRPF38A	100	99.359	ENSMFAG00000039449	PRPF38A	100	99.359	Macaca_fascicularis
ENSTBEG00000000725	PRPF38A	87	98.529	ENSMMUG00000014333	PRPF38A	98	98.529	Macaca_mulatta
ENSTBEG00000000725	PRPF38A	100	64.103	ENSMNEG00000040242	-	100	63.141	Macaca_nemestrina
ENSTBEG00000000725	PRPF38A	100	99.359	ENSMNEG00000031221	PRPF38A	100	99.359	Macaca_nemestrina
ENSTBEG00000000725	PRPF38A	100	99.359	ENSMLEG00000041105	PRPF38A	100	99.359	Mandrillus_leucophaeus
ENSTBEG00000000725	PRPF38A	71	88.235	ENSMAMG00000015431	prpf38a	100	80.831	Mastacembelus_armatus
ENSTBEG00000000725	PRPF38A	71	86.425	ENSMZEG00005017838	prpf38a	100	79.553	Maylandia_zebra
ENSTBEG00000000725	PRPF38A	96	97.659	ENSMGAG00000011176	PRPF38A	100	97.659	Meleagris_gallopavo
ENSTBEG00000000725	PRPF38A	85	94.697	ENSMAUG00000018029	-	87	94.805	Mesocricetus_auratus
ENSTBEG00000000725	PRPF38A	100	99.359	ENSMICG00000014193	PRPF38A	100	99.359	Microcebus_murinus
ENSTBEG00000000725	PRPF38A	100	99.038	ENSMOCG00000013080	Prpf38a	100	99.038	Microtus_ochrogaster
ENSTBEG00000000725	PRPF38A	83	81.783	ENSMMOG00000016972	prpf38a	81	87.446	Mola_mola
ENSTBEG00000000725	PRPF38A	100	97.764	ENSMODG00000000644	PRPF38A	100	97.764	Monodelphis_domestica
ENSTBEG00000000725	PRPF38A	71	88.235	ENSMALG00000019363	prpf38a	97	80.831	Monopterus_albus
ENSTBEG00000000725	PRPF38A	100	98.077	MGP_CAROLIEiJ_G0026269	Prpf38a	100	98.077	Mus_caroli
ENSTBEG00000000725	PRPF38A	100	98.077	ENSMUSG00000063800	Prpf38a	100	98.077	Mus_musculus
ENSTBEG00000000725	PRPF38A	100	98.077	MGP_PahariEiJ_G0028602	Prpf38a	100	98.077	Mus_pahari
ENSTBEG00000000725	PRPF38A	100	97.756	MGP_SPRETEiJ_G0027238	Prpf38a	100	98.522	Mus_spretus
ENSTBEG00000000725	PRPF38A	100	99.359	ENSMPUG00000006896	PRPF38A	100	99.359	Mustela_putorius_furo
ENSTBEG00000000725	PRPF38A	100	99.038	ENSNGAG00000011884	Prpf38a	100	99.038	Nannospalax_galili
ENSTBEG00000000725	PRPF38A	71	85.068	ENSNBRG00000004013	prpf38a	74	84.416	Neolamprologus_brichardi
ENSTBEG00000000725	PRPF38A	97	73.510	ENSNLEG00000012592	-	99	73.510	Nomascus_leucogenys
ENSTBEG00000000725	PRPF38A	100	66.667	ENSNLEG00000033398	-	94	66.667	Nomascus_leucogenys
ENSTBEG00000000725	PRPF38A	93	99.308	ENSNLEG00000017999	PRPF38A	93	99.308	Nomascus_leucogenys
ENSTBEG00000000725	PRPF38A	100	94.231	ENSMEUG00000003860	PRPF38A	100	94.231	Notamacropus_eugenii
ENSTBEG00000000725	PRPF38A	77	99.583	ENSOPRG00000008985	PRPF38A	100	99.583	Ochotona_princeps
ENSTBEG00000000725	PRPF38A	100	99.359	ENSODEG00000005869	PRPF38A	100	99.359	Octodon_degus
ENSTBEG00000000725	PRPF38A	71	86.878	ENSONIG00000007816	prpf38a	100	79.872	Oreochromis_niloticus
ENSTBEG00000000725	PRPF38A	100	64.331	ENSOANG00000009541	-	100	64.331	Ornithorhynchus_anatinus
ENSTBEG00000000725	PRPF38A	100	99.359	ENSOCUG00000000963	PRPF38A	100	99.359	Oryctolagus_cuniculus
ENSTBEG00000000725	PRPF38A	96	82.333	ENSORLG00000013485	prpf38a	99	81.731	Oryzias_latipes
ENSTBEG00000000725	PRPF38A	96	82.333	ENSORLG00020002130	prpf38a	99	81.731	Oryzias_latipes_hni
ENSTBEG00000000725	PRPF38A	96	82.000	ENSORLG00015021393	prpf38a	99	81.410	Oryzias_latipes_hsok
ENSTBEG00000000725	PRPF38A	96	81.879	ENSOMEG00000016333	prpf38a	100	81.150	Oryzias_melastigma
ENSTBEG00000000725	PRPF38A	100	99.359	ENSOGAG00000005423	PRPF38A	100	99.359	Otolemur_garnettii
ENSTBEG00000000725	PRPF38A	100	99.359	ENSOARG00000005373	PRPF38A	100	99.359	Ovis_aries
ENSTBEG00000000725	PRPF38A	100	99.359	ENSPPAG00000030905	PRPF38A	100	99.359	Pan_paniscus
ENSTBEG00000000725	PRPF38A	100	76.923	ENSPPAG00000033867	-	100	76.923	Pan_paniscus
ENSTBEG00000000725	PRPF38A	100	99.359	ENSPPRG00000013268	PRPF38A	100	99.359	Panthera_pardus
ENSTBEG00000000725	PRPF38A	100	99.359	ENSPTIG00000015419	PRPF38A	100	99.359	Panthera_tigris_altaica
ENSTBEG00000000725	PRPF38A	100	99.359	ENSPTRG00000000739	PRPF38A	100	99.359	Pan_troglodytes
ENSTBEG00000000725	PRPF38A	100	99.359	ENSPANG00000015483	PRPF38A	100	99.359	Papio_anubis
ENSTBEG00000000725	PRPF38A	100	78.205	ENSPKIG00000011439	prpf38a	100	79.487	Paramormyrops_kingsleyae
ENSTBEG00000000725	PRPF38A	100	97.115	ENSPSIG00000017487	PRPF38A	100	97.115	Pelodiscus_sinensis
ENSTBEG00000000725	PRPF38A	70	89.401	ENSPMGG00000021352	prpf38a	79	88.312	Periophthalmus_magnuspinnatus
ENSTBEG00000000725	PRPF38A	100	99.038	ENSPEMG00000023277	-	100	99.038	Peromyscus_maniculatus_bairdii
ENSTBEG00000000725	PRPF38A	100	92.063	ENSPEMG00000011212	-	100	91.429	Peromyscus_maniculatus_bairdii
ENSTBEG00000000725	PRPF38A	100	97.444	ENSPCIG00000022369	-	100	97.444	Phascolarctos_cinereus
ENSTBEG00000000725	PRPF38A	83	81.467	ENSPFOG00000004248	prpf38a	100	81.789	Poecilia_formosa
ENSTBEG00000000725	PRPF38A	92	77.055	ENSPLAG00000010328	prpf38a	100	81.789	Poecilia_latipinna
ENSTBEG00000000725	PRPF38A	84	79.323	ENSPMEG00000011804	prpf38a	100	81.789	Poecilia_mexicana
ENSTBEG00000000725	PRPF38A	95	73.667	ENSPREG00000002835	prpf38a	58	94.149	Poecilia_reticulata
ENSTBEG00000000725	PRPF38A	100	90.852	ENSPPYG00000001348	PRPF38A	100	90.852	Pongo_abelii
ENSTBEG00000000725	PRPF38A	100	98.718	ENSPCAG00000013328	PRPF38A	100	98.718	Procavia_capensis
ENSTBEG00000000725	PRPF38A	100	76.603	ENSPCOG00000020709	-	76	81.385	Propithecus_coquereli
ENSTBEG00000000725	PRPF38A	100	99.359	ENSPCOG00000016387	-	100	99.359	Propithecus_coquereli
ENSTBEG00000000725	PRPF38A	100	99.359	ENSPVAG00000009803	PRPF38A	100	99.359	Pteropus_vampyrus
ENSTBEG00000000725	PRPF38A	71	86.425	ENSPNYG00000005571	prpf38a	100	79.553	Pundamilia_nyererei
ENSTBEG00000000725	PRPF38A	100	81.789	ENSPNAG00000010399	prpf38a	100	81.789	Pygocentrus_nattereri
ENSTBEG00000000725	PRPF38A	100	98.718	ENSRNOG00000009451	Prpf38a	100	98.718	Rattus_norvegicus
ENSTBEG00000000725	PRPF38A	100	62.500	ENSRBIG00000034053	-	100	59.295	Rhinopithecus_bieti
ENSTBEG00000000725	PRPF38A	100	99.359	ENSRBIG00000036442	PRPF38A	100	100.000	Rhinopithecus_bieti
ENSTBEG00000000725	PRPF38A	98	78.105	ENSRROG00000040003	-	76	80.087	Rhinopithecus_roxellana
ENSTBEG00000000725	PRPF38A	100	99.359	ENSRROG00000032788	PRPF38A	100	99.359	Rhinopithecus_roxellana
ENSTBEG00000000725	PRPF38A	100	99.359	ENSSBOG00000019515	PRPF38A	100	99.359	Saimiri_boliviensis_boliviensis
ENSTBEG00000000725	PRPF38A	96	71.053	ENSSHAG00000006029	-	74	81.900	Sarcophilus_harrisii
ENSTBEG00000000725	PRPF38A	87	97.048	ENSSHAG00000006906	-	100	97.048	Sarcophilus_harrisii
ENSTBEG00000000725	PRPF38A	100	78.275	ENSSFOG00015013572	prpf38a	100	78.914	Scleropages_formosus
ENSTBEG00000000725	PRPF38A	71	88.688	ENSSMAG00000015379	prpf38a	75	87.879	Scophthalmus_maximus
ENSTBEG00000000725	PRPF38A	71	89.140	ENSSDUG00000001324	prpf38a	100	81.470	Seriola_dumerili
ENSTBEG00000000725	PRPF38A	71	89.140	ENSSLDG00000014803	prpf38a	100	81.470	Seriola_lalandi_dorsalis
ENSTBEG00000000725	PRPF38A	100	82.051	ENSSARG00000014458	PRPF38A	100	82.051	Sorex_araneus
ENSTBEG00000000725	PRPF38A	100	95.513	ENSSPUG00000013259	PRPF38A	100	95.513	Sphenodon_punctatus
ENSTBEG00000000725	PRPF38A	71	70.588	ENSSPAG00000010449	prpf38a	72	70.563	Stegastes_partitus
ENSTBEG00000000725	PRPF38A	100	99.359	ENSSSCG00000028288	PRPF38A	100	99.359	Sus_scrofa
ENSTBEG00000000725	PRPF38A	100	92.949	ENSTGUG00000008995	PRPF38A	100	92.949	Taeniopygia_guttata
ENSTBEG00000000725	PRPF38A	71	88.235	ENSTRUG00000003374	prpf38a	71	87.446	Takifugu_rubripes
ENSTBEG00000000725	PRPF38A	71	86.547	ENSTNIG00000005533	prpf38a	100	79.365	Tetraodon_nigroviridis
ENSTBEG00000000725	PRPF38A	100	99.359	ENSTTRG00000016139	PRPF38A	100	99.359	Tursiops_truncatus
ENSTBEG00000000725	PRPF38A	100	99.359	ENSUAMG00000000625	PRPF38A	100	99.359	Ursus_americanus
ENSTBEG00000000725	PRPF38A	100	99.359	ENSUMAG00000022674	PRPF38A	100	99.359	Ursus_maritimus
ENSTBEG00000000725	PRPF38A	74	99.567	ENSVPAG00000000907	PRPF38A	100	93.590	Vicugna_pacos
ENSTBEG00000000725	PRPF38A	100	99.359	ENSVVUG00000004475	PRPF38A	100	99.359	Vulpes_vulpes
ENSTBEG00000000725	PRPF38A	100	83.706	ENSXETG00000008060	prpf38a	100	87.540	Xenopus_tropicalis
ENSTBEG00000000725	PRPF38A	71	88.341	ENSXCOG00000007393	prpf38a	77	87.554	Xiphophorus_couchianus
ENSTBEG00000000725	PRPF38A	71	90.498	ENSXMAG00000026143	prpf38a	100	81.789	Xiphophorus_maculatus