EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTBEG00000000796 (Gene tree)
Gene ID: -
Gene Symbol: PATL1
Alias: FLJ36874|Pat1b
Full Name: PAT1 homolog 1%2C processing body mRNA decay factor
Gene Type: protein_coding
Species: Tupaia_belangeri
Status: putative
Strand: Minus strand
Length: 88722 bases
Position: chrGeneScaffold_1294:127631-216352
Accession: 26721
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTBEP00000000712	PAT1	PF09770.9	1.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTBET00000000813	PATL1-201	2295	-	ENSTBEP00000000712	764 (aa)	-	UPI0000F5F255

Gene Model

Click here to download ENSTBEG00000000796's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTBEG00000000796's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTBEG00000000796	PATL1	90	96.037	ENSG00000166889	PATL1	90	96.037	Homo_sapiens
ENSTBEG00000000796	PATL1	65	43.874	ENSAPOG00000021290	patl1	88	41.720	Acanthochromis_polyacanthus
ENSTBEG00000000796	PATL1	90	94.651	ENSAMEG00000014215	PATL1	90	93.256	Ailuropoda_melanoleuca
ENSTBEG00000000796	PATL1	87	41.348	ENSACIG00000005182	patl1	88	42.060	Amphilophus_citrinellus
ENSTBEG00000000796	PATL1	63	41.406	ENSAOCG00000021993	patl1	85	41.406	Amphiprion_ocellaris
ENSTBEG00000000796	PATL1	57	35.028	ENSAPEG00000011299	patl2	61	32.222	Amphiprion_percula
ENSTBEG00000000796	PATL1	57	70.968	ENSAPEG00000021391	patl1	70	61.538	Amphiprion_percula
ENSTBEG00000000796	PATL1	51	36.806	ENSATEG00000019567	patl2	55	34.028	Anabas_testudineus
ENSTBEG00000000796	PATL1	79	69.697	ENSATEG00000002230	patl1	70	61.538	Anabas_testudineus
ENSTBEG00000000796	PATL1	54	87.805	ENSAPLG00000013394	PATL1	73	87.805	Anas_platyrhynchos
ENSTBEG00000000796	PATL1	90	77.907	ENSACAG00000006607	PATL1	90	77.209	Anolis_carolinensis
ENSTBEG00000000796	PATL1	90	96.037	ENSANAG00000023078	PATL1	90	96.037	Aotus_nancymaae
ENSTBEG00000000796	PATL1	60	61.538	ENSACLG00000005144	patl1	74	47.664	Astatotilapia_calliptera
ENSTBEG00000000796	PATL1	54	33.333	ENSAMXG00000020293	patl2	57	34.466	Astyanax_mexicanus
ENSTBEG00000000796	PATL1	65	41.993	ENSAMXG00000010731	patl1	89	42.827	Astyanax_mexicanus
ENSTBEG00000000796	PATL1	90	95.116	ENSBTAG00000005913	PATL1	90	94.186	Bos_taurus
ENSTBEG00000000796	PATL1	90	95.804	ENSCJAG00000016192	PATL1	90	95.804	Callithrix_jacchus
ENSTBEG00000000796	PATL1	90	95.116	ENSCAFG00000007581	PATL1	90	93.721	Canis_familiaris
ENSTBEG00000000796	PATL1	90	95.116	ENSCAFG00020001648	PATL1	90	93.721	Canis_lupus_dingo
ENSTBEG00000000796	PATL1	90	93.953	ENSCHIG00000025913	PATL1	90	93.488	Capra_hircus
ENSTBEG00000000796	PATL1	90	95.571	ENSTSYG00000012748	PATL1	86	95.571	Carlito_syrichta
ENSTBEG00000000796	PATL1	90	89.791	ENSCAPG00000013668	PATL1	89	89.791	Cavia_aperea
ENSTBEG00000000796	PATL1	90	86.192	ENSCPOG00000006827	PATL1	90	86.192	Cavia_porcellus
ENSTBEG00000000796	PATL1	90	96.270	ENSCCAG00000023759	PATL1	90	96.270	Cebus_capucinus
ENSTBEG00000000796	PATL1	90	96.270	ENSCATG00000009629	PATL1	90	96.270	Cercocebus_atys
ENSTBEG00000000796	PATL1	90	91.375	ENSCLAG00000003427	PATL1	90	91.375	Chinchilla_lanigera
ENSTBEG00000000796	PATL1	81	97.772	ENSCSAG00000006095	PATL1	89	97.772	Chlorocebus_sabaeus
ENSTBEG00000000796	PATL1	59	97.778	ENSCHOG00000001611	PATL1	72	97.778	Choloepus_hoffmanni
ENSTBEG00000000796	PATL1	90	96.037	ENSCANG00000039197	PATL1	90	96.037	Colobus_angolensis_palliatus
ENSTBEG00000000796	PATL1	90	94.406	ENSCGRG00001024927	Patl1	90	94.406	Cricetulus_griseus_chok1gshd
ENSTBEG00000000796	PATL1	90	94.406	ENSCGRG00000000461	Patl1	90	94.406	Cricetulus_griseus_crigri
ENSTBEG00000000796	PATL1	52	38.571	ENSCSEG00000009438	patl2	51	36.429	Cynoglossus_semilaevis
ENSTBEG00000000796	PATL1	79	66.667	ENSCSEG00000008261	patl1	72	50.000	Cynoglossus_semilaevis
ENSTBEG00000000796	PATL1	57	60.000	ENSCVAG00000006664	patl1	79	60.000	Cyprinodon_variegatus
ENSTBEG00000000796	PATL1	87	41.505	ENSDARG00000017423	patl1	90	41.176	Danio_rerio
ENSTBEG00000000796	PATL1	90	82.791	ENSDNOG00000038865	PATL1	86	91.429	Dasypus_novemcinctus
ENSTBEG00000000796	PATL1	90	94.872	ENSDORG00000000237	Patl1	90	94.872	Dipodomys_ordii
ENSTBEG00000000796	PATL1	90	94.664	ENSEASG00005007963	PATL1	90	94.200	Equus_asinus_asinus
ENSTBEG00000000796	PATL1	90	94.664	ENSECAG00000011411	PATL1	90	94.200	Equus_caballus
ENSTBEG00000000796	PATL1	69	67.742	ENSELUG00000024249	patl1	89	40.856	Esox_lucius
ENSTBEG00000000796	PATL1	59	33.333	ENSELUG00000023244	patl2	57	32.323	Esox_lucius
ENSTBEG00000000796	PATL1	90	94.406	ENSFCAG00000015573	PATL1	90	94.406	Felis_catus
ENSTBEG00000000796	PATL1	79	43.902	ENSFALG00000009768	PATL2	80	43.902	Ficedula_albicollis
ENSTBEG00000000796	PATL1	90	76.047	ENSFALG00000012150	PATL1	90	74.126	Ficedula_albicollis
ENSTBEG00000000796	PATL1	90	91.375	ENSFDAG00000016128	PATL1	90	91.142	Fukomys_damarensis
ENSTBEG00000000796	PATL1	60	61.538	ENSFHEG00000017790	patl1	73	53.125	Fundulus_heteroclitus
ENSTBEG00000000796	PATL1	90	74.186	ENSGALG00000042641	PATL1	90	73.953	Gallus_gallus
ENSTBEG00000000796	PATL1	62	56.410	ENSGAFG00000006508	patl1	74	52.308	Gambusia_affinis
ENSTBEG00000000796	PATL1	90	44.342	ENSGACG00000016448	patl1	89	46.804	Gasterosteus_aculeatus
ENSTBEG00000000796	PATL1	90	80.787	ENSGAGG00000004461	PATL1	89	81.768	Gopherus_agassizii
ENSTBEG00000000796	PATL1	90	96.037	ENSGGOG00000004335	PATL1	90	96.037	Gorilla_gorilla
ENSTBEG00000000796	PATL1	60	61.538	ENSHBUG00000005365	patl1	74	47.664	Haplochromis_burtoni
ENSTBEG00000000796	PATL1	90	92.541	ENSHGLG00000018173	PATL1	90	92.541	Heterocephalus_glaber_female
ENSTBEG00000000796	PATL1	90	90.210	ENSHGLG00100003453	PATL1	90	90.210	Heterocephalus_glaber_male
ENSTBEG00000000796	PATL1	82	59.615	ENSHCOG00000001898	patl1	72	49.296	Hippocampus_comes
ENSTBEG00000000796	PATL1	89	95.261	ENSSTOG00000013764	PATL1	90	95.261	Ictidomys_tridecemlineatus
ENSTBEG00000000796	PATL1	90	94.393	ENSJJAG00000010135	Patl1	90	94.393	Jaculus_jaculus
ENSTBEG00000000796	PATL1	58	70.000	ENSKMAG00000020848	patl1	71	59.615	Kryptolebias_marmoratus
ENSTBEG00000000796	PATL1	82	63.462	ENSLBEG00000023617	patl1	69	63.462	Labrus_bergylta
ENSTBEG00000000796	PATL1	81	39.759	ENSLACG00000005291	-	80	39.759	Latimeria_chalumnae
ENSTBEG00000000796	PATL1	76	67.480	ENSLACG00000004640	PATL1	83	52.987	Latimeria_chalumnae
ENSTBEG00000000796	PATL1	89	42.023	ENSLOCG00000000717	patl1	89	42.094	Lepisosteus_oculatus
ENSTBEG00000000796	PATL1	84	96.748	ENSLAFG00000015161	PATL1	90	92.558	Loxodonta_africana
ENSTBEG00000000796	PATL1	90	96.270	ENSMFAG00000040851	PATL1	90	96.270	Macaca_fascicularis
ENSTBEG00000000796	PATL1	90	96.270	ENSMMUG00000017287	PATL1	90	96.270	Macaca_mulatta
ENSTBEG00000000796	PATL1	90	96.270	ENSMNEG00000038692	PATL1	90	96.270	Macaca_nemestrina
ENSTBEG00000000796	PATL1	90	96.037	ENSMLEG00000030044	PATL1	90	96.037	Mandrillus_leucophaeus
ENSTBEG00000000796	PATL1	57	67.742	ENSMAMG00000003950	patl1	89	42.578	Mastacembelus_armatus
ENSTBEG00000000796	PATL1	51	35.714	ENSMAMG00000013327	patl2	50	37.778	Mastacembelus_armatus
ENSTBEG00000000796	PATL1	60	61.538	ENSMZEG00005013404	patl1	74	47.664	Maylandia_zebra
ENSTBEG00000000796	PATL1	83	71.926	ENSMGAG00000003406	PATL1	89	70.737	Meleagris_gallopavo
ENSTBEG00000000796	PATL1	78	92.749	ENSMAUG00000012059	Patl1	87	92.901	Mesocricetus_auratus
ENSTBEG00000000796	PATL1	82	96.270	ENSMICG00000004172	PATL1	86	98.374	Microcebus_murinus
ENSTBEG00000000796	PATL1	90	94.172	ENSMOCG00000010087	Patl1	90	94.172	Microtus_ochrogaster
ENSTBEG00000000796	PATL1	89	41.570	ENSMMOG00000013711	patl1	88	40.888	Mola_mola
ENSTBEG00000000796	PATL1	90	83.023	ENSMODG00000020201	PATL1	90	83.256	Monodelphis_domestica
ENSTBEG00000000796	PATL1	59	71.111	ENSMALG00000018706	patl1	70	71.111	Monopterus_albus
ENSTBEG00000000796	PATL1	90	93.939	MGP_CAROLIEiJ_G0022739	Patl1	90	93.939	Mus_caroli
ENSTBEG00000000796	PATL1	90	94.172	ENSMUSG00000046139	Patl1	90	94.172	Mus_musculus
ENSTBEG00000000796	PATL1	90	93.473	MGP_PahariEiJ_G0014233	Patl1	90	93.473	Mus_pahari
ENSTBEG00000000796	PATL1	90	94.406	MGP_SPRETEiJ_G0023652	Patl1	90	94.406	Mus_spretus
ENSTBEG00000000796	PATL1	90	94.651	ENSMPUG00000014607	PATL1	90	93.256	Mustela_putorius_furo
ENSTBEG00000000796	PATL1	90	89.070	ENSMLUG00000011169	PATL1	89	89.070	Myotis_lucifugus
ENSTBEG00000000796	PATL1	90	95.381	ENSNGAG00000003682	Patl1	90	95.381	Nannospalax_galili
ENSTBEG00000000796	PATL1	90	90.210	ENSNLEG00000013081	PATL1	89	90.210	Nomascus_leucogenys
ENSTBEG00000000796	PATL1	55	90.323	ENSMEUG00000009391	PATL1	64	90.323	Notamacropus_eugenii
ENSTBEG00000000796	PATL1	59	96.032	ENSOPRG00000007963	PATL1	68	96.032	Ochotona_princeps
ENSTBEG00000000796	PATL1	74	87.781	ENSODEG00000001792	PATL1	99	87.781	Octodon_degus
ENSTBEG00000000796	PATL1	60	61.538	ENSONIG00000004170	patl1	90	45.392	Oreochromis_niloticus
ENSTBEG00000000796	PATL1	90	96.270	ENSOCUG00000002156	PATL1	90	96.270	Oryctolagus_cuniculus
ENSTBEG00000000796	PATL1	54	32.727	ENSORLG00000005780	patl2	56	30.612	Oryzias_latipes
ENSTBEG00000000796	PATL1	54	33.939	ENSORLG00020016506	patl2	54	31.633	Oryzias_latipes_hni
ENSTBEG00000000796	PATL1	54	33.333	ENSORLG00015014500	patl2	56	31.122	Oryzias_latipes_hsok
ENSTBEG00000000796	PATL1	60	59.615	ENSORLG00015022240	patl1	73	59.615	Oryzias_latipes_hsok
ENSTBEG00000000796	PATL1	90	96.037	ENSOGAG00000004351	PATL1	90	96.037	Otolemur_garnettii
ENSTBEG00000000796	PATL1	90	94.419	ENSOARG00000012005	PATL1	87	93.953	Ovis_aries
ENSTBEG00000000796	PATL1	90	96.270	ENSPPAG00000034275	PATL1	90	96.270	Pan_paniscus
ENSTBEG00000000796	PATL1	90	94.406	ENSPPRG00000020639	PATL1	90	94.406	Panthera_pardus
ENSTBEG00000000796	PATL1	90	94.406	ENSPTIG00000019298	PATL1	90	94.406	Panthera_tigris_altaica
ENSTBEG00000000796	PATL1	89	88.915	ENSPTRG00000003697	PATL1	92	89.260	Pan_troglodytes
ENSTBEG00000000796	PATL1	90	96.270	ENSPANG00000035620	PATL1	90	96.270	Papio_anubis
ENSTBEG00000000796	PATL1	80	54.878	ENSPKIG00000016224	patl1	89	43.033	Paramormyrops_kingsleyae
ENSTBEG00000000796	PATL1	90	79.861	ENSPSIG00000016206	PATL1	86	79.398	Pelodiscus_sinensis
ENSTBEG00000000796	PATL1	68	42.023	ENSPMGG00000002644	patl1	89	42.023	Periophthalmus_magnuspinnatus
ENSTBEG00000000796	PATL1	90	94.406	ENSPEMG00000014215	Patl1	90	94.406	Peromyscus_maniculatus_bairdii
ENSTBEG00000000796	PATL1	90	83.991	ENSPCIG00000010852	PATL1	90	84.223	Phascolarctos_cinereus
ENSTBEG00000000796	PATL1	90	41.985	ENSPFOG00000007768	patl1	89	42.245	Poecilia_formosa
ENSTBEG00000000796	PATL1	54	56.410	ENSPLAG00000018465	patl1	66	48.758	Poecilia_latipinna
ENSTBEG00000000796	PATL1	76	47.205	ENSPMEG00000006555	patl1	67	48.447	Poecilia_mexicana
ENSTBEG00000000796	PATL1	57	49.593	ENSPREG00000003874	patl1	54	49.593	Poecilia_reticulata
ENSTBEG00000000796	PATL1	90	96.270	ENSPPYG00000003230	PATL1	90	96.270	Pongo_abelii
ENSTBEG00000000796	PATL1	90	94.872	ENSPCOG00000020770	PATL1	90	94.872	Propithecus_coquereli
ENSTBEG00000000796	PATL1	76	85.893	ENSPVAG00000015239	PATL1	88	86.834	Pteropus_vampyrus
ENSTBEG00000000796	PATL1	68	40.557	ENSPNYG00000018936	patl1	85	40.467	Pundamilia_nyererei
ENSTBEG00000000796	PATL1	87	40.078	ENSPNAG00000017907	patl1	89	41.837	Pygocentrus_nattereri
ENSTBEG00000000796	PATL1	51	35.606	ENSPNAG00000002315	patl2	52	35.714	Pygocentrus_nattereri
ENSTBEG00000000796	PATL1	90	94.639	ENSRNOG00000021052	Patl1	90	94.639	Rattus_norvegicus
ENSTBEG00000000796	PATL1	90	88.525	ENSRBIG00000032263	PATL1	86	88.525	Rhinopithecus_bieti
ENSTBEG00000000796	PATL1	90	96.037	ENSRROG00000032861	PATL1	90	96.037	Rhinopithecus_roxellana
ENSTBEG00000000796	PATL1	90	96.037	ENSSBOG00000025195	PATL1	90	96.037	Saimiri_boliviensis_boliviensis
ENSTBEG00000000796	PATL1	90	84.527	ENSSHAG00000004309	PATL1	90	84.758	Sarcophilus_harrisii
ENSTBEG00000000796	PATL1	65	41.216	ENSSFOG00015009614	patl1	89	42.181	Scleropages_formosus
ENSTBEG00000000796	PATL1	76	31.642	ENSSFOG00015000720	patl2	77	40.964	Scleropages_formosus
ENSTBEG00000000796	PATL1	55	33.728	ENSSMAG00000017262	patl2	61	32.571	Scophthalmus_maximus
ENSTBEG00000000796	PATL1	82	55.769	ENSSMAG00000009482	patl1	73	48.137	Scophthalmus_maximus
ENSTBEG00000000796	PATL1	82	63.462	ENSSDUG00000005362	patl1	62	63.462	Seriola_dumerili
ENSTBEG00000000796	PATL1	82	61.538	ENSSLDG00000019146	patl1	62	61.538	Seriola_lalandi_dorsalis
ENSTBEG00000000796	PATL1	70	94.819	ENSSARG00000009600	PATL1	70	94.819	Sorex_araneus
ENSTBEG00000000796	PATL1	90	77.209	ENSSPUG00000009453	PATL1	90	76.977	Sphenodon_punctatus
ENSTBEG00000000796	PATL1	65	41.259	ENSSPAG00000003187	patl1	89	42.585	Stegastes_partitus
ENSTBEG00000000796	PATL1	90	94.884	ENSSSCG00000013124	PATL1	90	94.419	Sus_scrofa
ENSTBEG00000000796	PATL1	90	75.751	ENSTGUG00000006222	PATL1	90	73.843	Taeniopygia_guttata
ENSTBEG00000000796	PATL1	52	35.000	ENSTRUG00000005647	patl2	51	34.286	Takifugu_rubripes
ENSTBEG00000000796	PATL1	84	50.704	ENSTRUG00000000709	patl1	89	41.139	Takifugu_rubripes
ENSTBEG00000000796	PATL1	62	96.795	ENSTTRG00000009389	PATL1	73	96.795	Tursiops_truncatus
ENSTBEG00000000796	PATL1	90	94.419	ENSUMAG00000018634	PATL1	89	96.111	Ursus_maritimus
ENSTBEG00000000796	PATL1	56	95.833	ENSVPAG00000009224	PATL1	65	95.833	Vicugna_pacos
ENSTBEG00000000796	PATL1	90	95.116	ENSVVUG00000016668	PATL1	89	96.389	Vulpes_vulpes
ENSTBEG00000000796	PATL1	54	40.964	ENSXETG00000014167	patl2	60	40.964	Xenopus_tropicalis
ENSTBEG00000000796	PATL1	69	57.692	ENSXCOG00000010808	patl1	84	57.692	Xiphophorus_couchianus
ENSTBEG00000000796	PATL1	54	55.844	ENSXMAG00000013834	patl1	74	50.769	Xiphophorus_maculatus