EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTBEG00000000821 (Gene tree)
Gene ID: -
Gene Symbol: PRPF4
Alias: HPRP4|HPRP4P|PRP4|Prp4p|SNRNP60
Full Name: pre-mRNA processing factor 4
Gene Type: protein_coding
Species: Tupaia_belangeri
Status: putative
Strand: Plus strand
Length: 14243 bases
Position: chrGeneScaffold_2561:24850-39092
Accession: 17349
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTBEP00000000726	PRP4	PF08799.11	2.6e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTBET00000000829	PRPF4-201	1569	-	ENSTBEP00000000726	522 (aa)	-	UPI0000F5EFD6

Gene Model

Click here to download ENSTBEG00000000821's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTBEG00000000821's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTBEG00000000821	PRPF4	52	30.189	ENSTBEG00000003659	WDR5B	91	30.189

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTBEG00000000821	PRPF4	100	90.613	ENSG00000136875	PRPF4	100	90.613	Homo_sapiens
ENSTBEG00000000821	PRPF4	96	69.665	ENSAPOG00000014132	prpf4	98	69.665	Acanthochromis_polyacanthus
ENSTBEG00000000821	PRPF4	100	90.613	ENSAMEG00000013048	PRPF4	98	90.613	Ailuropoda_melanoleuca
ENSTBEG00000000821	PRPF4	96	70.238	ENSACIG00000005579	prpf4	99	70.238	Amphilophus_citrinellus
ENSTBEG00000000821	PRPF4	96	69.505	ENSAOCG00000005457	prpf4	99	69.505	Amphiprion_ocellaris
ENSTBEG00000000821	PRPF4	96	69.307	ENSAPEG00000000776	prpf4	99	69.307	Amphiprion_percula
ENSTBEG00000000821	PRPF4	96	69.643	ENSATEG00000023013	prpf4	99	69.643	Anabas_testudineus
ENSTBEG00000000821	PRPF4	98	82.456	ENSAPLG00000006534	PRPF4	96	82.456	Anas_platyrhynchos
ENSTBEG00000000821	PRPF4	100	81.679	ENSACAG00000015110	PRPF4	100	81.679	Anolis_carolinensis
ENSTBEG00000000821	PRPF4	100	90.805	ENSANAG00000022464	PRPF4	96	90.805	Aotus_nancymaae
ENSTBEG00000000821	PRPF4	96	69.841	ENSACLG00000019031	prpf4	99	69.841	Astatotilapia_calliptera
ENSTBEG00000000821	PRPF4	97	57.471	ENSAMXG00000006756	prpf4	99	66.733	Astyanax_mexicanus
ENSTBEG00000000821	PRPF4	100	89.847	ENSBTAG00000004571	PRPF4	100	89.847	Bos_taurus
ENSTBEG00000000821	PRPF4	90	40.421	WBGene00007972	prp-4	96	40.421	Caenorhabditis_elegans
ENSTBEG00000000821	PRPF4	100	90.996	ENSCJAG00000017856	PRPF4	100	90.996	Callithrix_jacchus
ENSTBEG00000000821	PRPF4	100	90.613	ENSCAFG00000003224	PRPF4	97	90.613	Canis_familiaris
ENSTBEG00000000821	PRPF4	100	90.613	ENSCAFG00020022637	PRPF4	100	90.613	Canis_lupus_dingo
ENSTBEG00000000821	PRPF4	100	90.613	ENSCHIG00000024648	-	100	90.613	Capra_hircus
ENSTBEG00000000821	PRPF4	100	90.805	ENSTSYG00000010366	PRPF4	100	90.805	Carlito_syrichta
ENSTBEG00000000821	PRPF4	88	84.248	ENSCAPG00000008935	PRPF4	97	84.248	Cavia_aperea
ENSTBEG00000000821	PRPF4	100	90.613	ENSCPOG00000010747	-	100	90.613	Cavia_porcellus
ENSTBEG00000000821	PRPF4	100	84.674	ENSCPOG00000014729	-	100	84.674	Cavia_porcellus
ENSTBEG00000000821	PRPF4	100	90.805	ENSCCAG00000028990	PRPF4	100	90.805	Cebus_capucinus
ENSTBEG00000000821	PRPF4	100	90.421	ENSCATG00000021552	PRPF4	100	90.421	Cercocebus_atys
ENSTBEG00000000821	PRPF4	100	90.805	ENSCLAG00000013448	PRPF4	100	90.805	Chinchilla_lanigera
ENSTBEG00000000821	PRPF4	87	86.283	ENSCHOG00000007233	PRPF4	100	86.283	Choloepus_hoffmanni
ENSTBEG00000000821	PRPF4	99	82.785	ENSCPBG00000019136	PRPF4	74	82.785	Chrysemys_picta_bellii
ENSTBEG00000000821	PRPF4	94	55.332	ENSCING00000001299	-	97	54.059	Ciona_intestinalis
ENSTBEG00000000821	PRPF4	96	53.373	ENSCSAVG00000009178	-	100	54.113	Ciona_savignyi
ENSTBEG00000000821	PRPF4	100	90.613	ENSCANG00000003246	PRPF4	100	90.613	Colobus_angolensis_palliatus
ENSTBEG00000000821	PRPF4	100	90.421	ENSCGRG00001016992	Prpf4	100	90.421	Cricetulus_griseus_chok1gshd
ENSTBEG00000000821	PRPF4	100	90.421	ENSCGRG00000017560	Prpf4	100	90.421	Cricetulus_griseus_crigri
ENSTBEG00000000821	PRPF4	97	68.317	ENSCSEG00000020451	prpf4	99	68.317	Cynoglossus_semilaevis
ENSTBEG00000000821	PRPF4	97	72.871	ENSDARG00000067639	prpf4	99	72.871	Danio_rerio
ENSTBEG00000000821	PRPF4	100	89.847	ENSDNOG00000013203	PRPF4	100	89.847	Dasypus_novemcinctus
ENSTBEG00000000821	PRPF4	100	90.421	ENSDORG00000026275	Prpf4	100	90.421	Dipodomys_ordii
ENSTBEG00000000821	PRPF4	87	52.079	FBgn0036733	U4-U6-60K	99	46.715	Drosophila_melanogaster
ENSTBEG00000000821	PRPF4	100	89.293	ENSETEG00000020389	PRPF4	100	89.293	Echinops_telfairi
ENSTBEG00000000821	PRPF4	95	66.590	ENSEBUG00000015229	prpf4	86	67.051	Eptatretus_burgeri
ENSTBEG00000000821	PRPF4	100	90.805	ENSEASG00005022678	PRPF4	100	90.805	Equus_asinus_asinus
ENSTBEG00000000821	PRPF4	100	90.805	ENSECAG00000007072	PRPF4	100	90.805	Equus_caballus
ENSTBEG00000000821	PRPF4	80	99.034	ENSEEUG00000007480	PRPF4	82	99.034	Erinaceus_europaeus
ENSTBEG00000000821	PRPF4	97	74.257	ENSELUG00000007510	prpf4	99	74.257	Esox_lucius
ENSTBEG00000000821	PRPF4	100	90.996	ENSFCAG00000005514	PRPF4	100	90.996	Felis_catus
ENSTBEG00000000821	PRPF4	98	78.619	ENSFALG00000005423	PRPF4	90	76.774	Ficedula_albicollis
ENSTBEG00000000821	PRPF4	100	90.613	ENSFDAG00000005839	PRPF4	100	90.613	Fukomys_damarensis
ENSTBEG00000000821	PRPF4	96	69.048	ENSFHEG00000001300	prpf4	99	69.048	Fundulus_heteroclitus
ENSTBEG00000000821	PRPF4	98	82.192	ENSGALG00000008857	PRPF4	96	81.871	Gallus_gallus
ENSTBEG00000000821	PRPF4	85	59.706	ENSGAFG00000012164	prpf4	70	59.706	Gambusia_affinis
ENSTBEG00000000821	PRPF4	96	63.492	ENSGACG00000015476	prpf4	99	62.698	Gasterosteus_aculeatus
ENSTBEG00000000821	PRPF4	99	82.592	ENSGAGG00000025029	PRPF4	96	82.592	Gopherus_agassizii
ENSTBEG00000000821	PRPF4	100	90.421	ENSGGOG00000006943	PRPF4	100	90.421	Gorilla_gorilla
ENSTBEG00000000821	PRPF4	96	69.643	ENSHBUG00000000562	prpf4	99	69.643	Haplochromis_burtoni
ENSTBEG00000000821	PRPF4	100	73.855	ENSHGLG00000016628	-	100	74.618	Heterocephalus_glaber_female
ENSTBEG00000000821	PRPF4	100	90.613	ENSHGLG00000015191	PRPF4	100	90.613	Heterocephalus_glaber_female
ENSTBEG00000000821	PRPF4	100	76.628	ENSHGLG00000003838	-	100	76.628	Heterocephalus_glaber_female
ENSTBEG00000000821	PRPF4	100	76.628	ENSHGLG00100005571	-	100	76.628	Heterocephalus_glaber_male
ENSTBEG00000000821	PRPF4	97	72.277	ENSIPUG00000017956	PRPF4	99	72.277	Ictalurus_punctatus
ENSTBEG00000000821	PRPF4	100	90.421	ENSSTOG00000027833	PRPF4	100	90.421	Ictidomys_tridecemlineatus
ENSTBEG00000000821	PRPF4	100	90.805	ENSJJAG00000008838	Prpf4	100	90.805	Jaculus_jaculus
ENSTBEG00000000821	PRPF4	96	69.444	ENSKMAG00000013236	prpf4	99	69.444	Kryptolebias_marmoratus
ENSTBEG00000000821	PRPF4	96	68.725	ENSLBEG00000020611	prpf4	99	68.725	Labrus_bergylta
ENSTBEG00000000821	PRPF4	98	78.711	ENSLACG00000016317	PRPF4	98	78.711	Latimeria_chalumnae
ENSTBEG00000000821	PRPF4	97	74.257	ENSLOCG00000000581	prpf4	99	74.257	Lepisosteus_oculatus
ENSTBEG00000000821	PRPF4	100	89.464	ENSLAFG00000018225	PRPF4	100	89.464	Loxodonta_africana
ENSTBEG00000000821	PRPF4	100	90.230	ENSMFAG00000039397	PRPF4	100	90.230	Macaca_fascicularis
ENSTBEG00000000821	PRPF4	100	90.421	ENSMMUG00000005844	PRPF4	100	90.421	Macaca_mulatta
ENSTBEG00000000821	PRPF4	84	98.068	ENSMNEG00000033737	PRPF4	88	98.068	Macaca_nemestrina
ENSTBEG00000000821	PRPF4	100	90.421	ENSMLEG00000040284	PRPF4	100	90.421	Mandrillus_leucophaeus
ENSTBEG00000000821	PRPF4	97	69.034	ENSMAMG00000020141	prpf4	99	69.034	Mastacembelus_armatus
ENSTBEG00000000821	PRPF4	96	69.841	ENSMZEG00005023205	prpf4	99	69.841	Maylandia_zebra
ENSTBEG00000000821	PRPF4	99	80.614	ENSMGAG00000001796	PRPF4	97	80.769	Meleagris_gallopavo
ENSTBEG00000000821	PRPF4	100	90.038	ENSMAUG00000018022	Prpf4	100	90.038	Mesocricetus_auratus
ENSTBEG00000000821	PRPF4	100	90.421	ENSMICG00000015022	PRPF4	100	90.421	Microcebus_murinus
ENSTBEG00000000821	PRPF4	100	90.230	ENSMOCG00000018273	Prpf4	100	90.230	Microtus_ochrogaster
ENSTBEG00000000821	PRPF4	97	67.723	ENSMMOG00000021177	prpf4	99	67.723	Mola_mola
ENSTBEG00000000821	PRPF4	100	86.450	ENSMODG00000004444	-	100	86.450	Monodelphis_domestica
ENSTBEG00000000821	PRPF4	100	86.424	ENSMODG00000025096	-	97	86.424	Monodelphis_domestica
ENSTBEG00000000821	PRPF4	96	69.444	ENSMALG00000013624	prpf4	99	69.444	Monopterus_albus
ENSTBEG00000000821	PRPF4	100	90.230	MGP_CAROLIEiJ_G0026078	Prpf4	100	90.230	Mus_caroli
ENSTBEG00000000821	PRPF4	100	90.230	ENSMUSG00000066148	Prpf4	100	90.230	Mus_musculus
ENSTBEG00000000821	PRPF4	100	90.038	MGP_PahariEiJ_G0028413	Prpf4	100	90.038	Mus_pahari
ENSTBEG00000000821	PRPF4	100	90.230	MGP_SPRETEiJ_G0027042	Prpf4	100	90.230	Mus_spretus
ENSTBEG00000000821	PRPF4	100	90.613	ENSMPUG00000007883	PRPF4	100	90.613	Mustela_putorius_furo
ENSTBEG00000000821	PRPF4	100	90.613	ENSMLUG00000015309	-	97	90.613	Myotis_lucifugus
ENSTBEG00000000821	PRPF4	100	88.697	ENSMLUG00000008626	-	97	88.697	Myotis_lucifugus
ENSTBEG00000000821	PRPF4	100	85.057	ENSNGAG00000000468	Prpf4	100	85.057	Nannospalax_galili
ENSTBEG00000000821	PRPF4	96	70.040	ENSNBRG00000007972	prpf4	99	70.040	Neolamprologus_brichardi
ENSTBEG00000000821	PRPF4	100	90.805	ENSNLEG00000016647	PRPF4	100	90.805	Nomascus_leucogenys
ENSTBEG00000000821	PRPF4	98	86.693	ENSMEUG00000013256	PRPF4	99	86.693	Notamacropus_eugenii
ENSTBEG00000000821	PRPF4	100	90.230	ENSOPRG00000005302	PRPF4	100	90.230	Ochotona_princeps
ENSTBEG00000000821	PRPF4	100	90.996	ENSODEG00000018147	PRPF4	100	90.996	Octodon_degus
ENSTBEG00000000821	PRPF4	99	68.199	ENSONIG00000012671	prpf4	99	69.841	Oreochromis_niloticus
ENSTBEG00000000821	PRPF4	100	90.613	ENSOCUG00000005046	PRPF4	100	90.613	Oryctolagus_cuniculus
ENSTBEG00000000821	PRPF4	96	67.331	ENSORLG00000019641	prpf4	98	67.600	Oryzias_latipes
ENSTBEG00000000821	PRPF4	96	67.331	ENSORLG00020019438	prpf4	98	67.600	Oryzias_latipes_hni
ENSTBEG00000000821	PRPF4	96	67.331	ENSOMEG00000020941	prpf4	99	67.158	Oryzias_melastigma
ENSTBEG00000000821	PRPF4	100	85.824	ENSOGAG00000007802	PRPF4	98	85.824	Otolemur_garnettii
ENSTBEG00000000821	PRPF4	100	90.421	ENSOARG00000006319	PRPF4	97	90.421	Ovis_aries
ENSTBEG00000000821	PRPF4	100	90.421	ENSPPAG00000041797	PRPF4	100	90.421	Pan_paniscus
ENSTBEG00000000821	PRPF4	100	90.805	ENSPPRG00000014360	PRPF4	100	90.805	Panthera_pardus
ENSTBEG00000000821	PRPF4	100	90.805	ENSPTIG00000009574	PRPF4	100	90.805	Panthera_tigris_altaica
ENSTBEG00000000821	PRPF4	100	90.613	ENSPTRG00000021274	PRPF4	100	90.613	Pan_troglodytes
ENSTBEG00000000821	PRPF4	100	90.613	ENSPANG00000025776	PRPF4	96	90.613	Papio_anubis
ENSTBEG00000000821	PRPF4	97	74.059	ENSPKIG00000017259	prpf4	99	74.059	Paramormyrops_kingsleyae
ENSTBEG00000000821	PRPF4	98	82.685	ENSPSIG00000010713	PRPF4	90	82.685	Pelodiscus_sinensis
ENSTBEG00000000821	PRPF4	99	52.294	ENSPMGG00000000997	prpf4	99	52.294	Periophthalmus_magnuspinnatus
ENSTBEG00000000821	PRPF4	100	90.421	ENSPEMG00000024115	Prpf4	100	90.421	Peromyscus_maniculatus_bairdii
ENSTBEG00000000821	PRPF4	98	86.693	ENSPCIG00000003821	PRPF4	99	86.693	Phascolarctos_cinereus
ENSTBEG00000000821	PRPF4	96	62.919	ENSPFOG00000013524	prpf4	98	62.919	Poecilia_formosa
ENSTBEG00000000821	PRPF4	84	58.876	ENSPLAG00000011620	prpf4	98	58.876	Poecilia_latipinna
ENSTBEG00000000821	PRPF4	91	62.952	ENSPMEG00000006813	prpf4	98	62.952	Poecilia_mexicana
ENSTBEG00000000821	PRPF4	98	90.272	ENSPCAG00000002561	PRPF4	100	90.272	Procavia_capensis
ENSTBEG00000000821	PRPF4	100	90.613	ENSPCOG00000011975	PRPF4	100	90.613	Propithecus_coquereli
ENSTBEG00000000821	PRPF4	100	94.253	ENSPVAG00000004708	PRPF4	100	94.253	Pteropus_vampyrus
ENSTBEG00000000821	PRPF4	96	69.841	ENSPNYG00000008013	prpf4	99	69.841	Pundamilia_nyererei
ENSTBEG00000000821	PRPF4	97	72.871	ENSPNAG00000000697	prpf4	99	72.871	Pygocentrus_nattereri
ENSTBEG00000000821	PRPF4	100	90.230	ENSRNOG00000014777	Prpf4	100	90.230	Rattus_norvegicus
ENSTBEG00000000821	PRPF4	100	90.613	ENSRBIG00000040221	PRPF4	100	90.613	Rhinopithecus_bieti
ENSTBEG00000000821	PRPF4	100	90.613	ENSRROG00000040240	PRPF4	100	90.613	Rhinopithecus_roxellana
ENSTBEG00000000821	PRPF4	100	86.832	ENSSHAG00000017658	PRPF4	100	86.832	Sarcophilus_harrisii
ENSTBEG00000000821	PRPF4	97	75.050	ENSSFOG00015008963	prpf4	99	75.050	Scleropages_formosus
ENSTBEG00000000821	PRPF4	96	68.849	ENSSMAG00000008889	prpf4	99	68.849	Scophthalmus_maximus
ENSTBEG00000000821	PRPF4	96	66.335	ENSSDUG00000022083	prpf4	98	66.534	Seriola_dumerili
ENSTBEG00000000821	PRPF4	96	66.534	ENSSLDG00000008115	prpf4	98	66.733	Seriola_lalandi_dorsalis
ENSTBEG00000000821	PRPF4	100	82.184	ENSSPUG00000015582	PRPF4	100	82.184	Sphenodon_punctatus
ENSTBEG00000000821	PRPF4	96	64.103	ENSSPAG00000011286	prpf4	99	64.103	Stegastes_partitus
ENSTBEG00000000821	PRPF4	100	90.805	ENSSSCG00000024648	PRPF4	100	90.805	Sus_scrofa
ENSTBEG00000000821	PRPF4	94	82.413	ENSTGUG00000002623	PRPF4	100	82.413	Taeniopygia_guttata
ENSTBEG00000000821	PRPF4	97	68.182	ENSTRUG00000008853	prpf4	99	68.182	Takifugu_rubripes
ENSTBEG00000000821	PRPF4	97	67.723	ENSTNIG00000013250	prpf4	99	67.723	Tetraodon_nigroviridis
ENSTBEG00000000821	PRPF4	82	97.674	ENSTTRG00000003246	PRPF4	85	97.674	Tursiops_truncatus
ENSTBEG00000000821	PRPF4	64	82.985	ENSUAMG00000018288	PRPF4	90	82.985	Ursus_americanus
ENSTBEG00000000821	PRPF4	100	89.847	ENSUMAG00000019375	PRPF4	100	89.847	Ursus_maritimus
ENSTBEG00000000821	PRPF4	100	90.805	ENSVPAG00000005281	PRPF4	100	90.805	Vicugna_pacos
ENSTBEG00000000821	PRPF4	100	90.114	ENSVVUG00000002476	PRPF4	100	90.114	Vulpes_vulpes
ENSTBEG00000000821	PRPF4	77	47.778	ENSXCOG00000006101	prpf4	93	50.248	Xiphophorus_couchianus
ENSTBEG00000000821	PRPF4	96	56.332	ENSXMAG00000002750	prpf4	98	57.853	Xiphophorus_maculatus