EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTBEG00000000943 (Gene tree)
Gene ID: -
Gene Symbol: RTCA
Alias: RPC|RTC1|RTCD1
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Tupaia_belangeri
Status: putative
Strand: Plus strand
Length: 37329 bases
Position: chrGeneScaffold_1867:111812-149140
Accession: 17981
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTBEP00000000824	RTC	PF01137.21	1.9e-30	1	1
ENSTBEP00000000824	RTC_insert	PF05189.13	3.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTBET00000000947	RTCA-201	1137	-	ENSTBEP00000000824	378 (aa)	-	UPI0000F6031A

Gene Model

Click here to download ENSTBEG00000000943's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTBEG00000000943's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTBEG00000000943	RTCA	82	67.227	ENSG00000137996	RTCA	98	89.583	Homo_sapiens
ENSTBEG00000000943	RTCA	59	59.048	ENSAPOG00000001345	rtca	57	59.048	Acanthochromis_polyacanthus
ENSTBEG00000000943	RTCA	59	57.143	ENSACIG00000019643	rtca	58	57.143	Amphilophus_citrinellus
ENSTBEG00000000943	RTCA	59	59.048	ENSAOCG00000014979	rtca	57	59.048	Amphiprion_ocellaris
ENSTBEG00000000943	RTCA	59	59.048	ENSAPEG00000006945	rtca	57	59.048	Amphiprion_percula
ENSTBEG00000000943	RTCA	82	51.261	ENSATEG00000006315	rtca	59	55.455	Anabas_testudineus
ENSTBEG00000000943	RTCA	78	55.462	ENSAPLG00000015430	RTCA	58	63.265	Anas_platyrhynchos
ENSTBEG00000000943	RTCA	82	68.067	ENSANAG00000025446	RTCA	60	89.091	Aotus_nancymaae
ENSTBEG00000000943	RTCA	61	54.545	ENSACLG00000020770	rtca	59	54.545	Astatotilapia_calliptera
ENSTBEG00000000943	RTCA	59	61.538	ENSAMXG00000043271	rtca	57	61.538	Astyanax_mexicanus
ENSTBEG00000000943	RTCA	82	68.067	ENSBTAG00000006321	RTCA	59	82.727	Bos_taurus
ENSTBEG00000000943	RTCA	82	68.067	ENSCJAG00000003398	RTCA	59	80.909	Callithrix_jacchus
ENSTBEG00000000943	RTCA	82	67.227	ENSCHIG00000018937	RTCA	76	67.227	Capra_hircus
ENSTBEG00000000943	RTCA	82	66.387	ENSTSYG00000011305	RTCA	60	89.091	Carlito_syrichta
ENSTBEG00000000943	RTCA	64	98.039	ENSCCAG00000021844	RTCA	60	90.909	Cebus_capucinus
ENSTBEG00000000943	RTCA	82	68.067	ENSCATG00000019364	RTCA	60	89.091	Cercocebus_atys
ENSTBEG00000000943	RTCA	65	66.387	ENSCLAG00000006125	RTCA	53	95.833	Chinchilla_lanigera
ENSTBEG00000000943	RTCA	82	68.067	ENSCSAG00000001509	RTCA	59	81.818	Chlorocebus_sabaeus
ENSTBEG00000000943	RTCA	82	63.866	ENSCHOG00000005211	RTCA	59	80.000	Choloepus_hoffmanni
ENSTBEG00000000943	RTCA	64	84.314	ENSCPBG00000026658	RTCA	59	74.545	Chrysemys_picta_bellii
ENSTBEG00000000943	RTCA	80	36.975	ENSCING00000007875	-	57	46.154	Ciona_intestinalis
ENSTBEG00000000943	RTCA	80	38.655	ENSCSAVG00000007269	-	57	46.154	Ciona_savignyi
ENSTBEG00000000943	RTCA	82	68.067	ENSCANG00000040106	RTCA	60	90.000	Colobus_angolensis_palliatus
ENSTBEG00000000943	RTCA	80	49.580	ENSCSEG00000000530	rtca	56	54.808	Cynoglossus_semilaevis
ENSTBEG00000000943	RTCA	59	60.952	ENSDARG00000002215	rtca	58	60.952	Danio_rerio
ENSTBEG00000000943	RTCA	82	65.546	ENSDNOG00000000456	RTCA	59	80.000	Dasypus_novemcinctus
ENSTBEG00000000943	RTCA	82	64.706	ENSDORG00000005448	Rtca	59	80.000	Dipodomys_ordii
ENSTBEG00000000943	RTCA	82	66.387	ENSEASG00005015926	RTCA	59	80.909	Equus_asinus_asinus
ENSTBEG00000000943	RTCA	82	66.387	ENSECAG00000019831	RTCA	59	80.909	Equus_caballus
ENSTBEG00000000943	RTCA	59	60.000	ENSELUG00000003741	rtca	58	60.000	Esox_lucius
ENSTBEG00000000943	RTCA	82	66.387	ENSFCAG00000024460	RTCA	60	85.088	Felis_catus
ENSTBEG00000000943	RTCA	58	68.519	ENSFDAG00000016084	-	59	68.519	Fukomys_damarensis
ENSTBEG00000000943	RTCA	82	67.227	ENSFDAG00000012070	-	59	80.909	Fukomys_damarensis
ENSTBEG00000000943	RTCA	81	51.261	ENSGMOG00000013264	rtca	58	56.190	Gadus_morhua
ENSTBEG00000000943	RTCA	82	53.782	ENSGALG00000005277	RTCA	59	72.727	Gallus_gallus
ENSTBEG00000000943	RTCA	59	57.143	ENSGAFG00000011853	rtca	57	57.143	Gambusia_affinis
ENSTBEG00000000943	RTCA	59	60.000	ENSGACG00000013497	rtca	58	60.000	Gasterosteus_aculeatus
ENSTBEG00000000943	RTCA	82	67.227	ENSGGOG00000044018	-	59	82.727	Gorilla_gorilla
ENSTBEG00000000943	RTCA	82	66.387	ENSGGOG00000009546	-	51	100.000	Gorilla_gorilla
ENSTBEG00000000943	RTCA	61	53.636	ENSHBUG00000002114	rtca	59	53.636	Haplochromis_burtoni
ENSTBEG00000000943	RTCA	82	68.067	ENSHGLG00000002617	RTCA	59	80.000	Heterocephalus_glaber_female
ENSTBEG00000000943	RTCA	82	68.067	ENSHGLG00100006056	RTCA	59	80.000	Heterocephalus_glaber_male
ENSTBEG00000000943	RTCA	59	53.333	ENSHCOG00000020628	rtca	51	53.333	Hippocampus_comes
ENSTBEG00000000943	RTCA	59	60.952	ENSIPUG00000024803	rtca	58	60.952	Ictalurus_punctatus
ENSTBEG00000000943	RTCA	82	65.546	ENSSTOG00000013528	-	58	65.546	Ictidomys_tridecemlineatus
ENSTBEG00000000943	RTCA	82	52.101	ENSSTOG00000033099	-	59	71.171	Ictidomys_tridecemlineatus
ENSTBEG00000000943	RTCA	61	76.364	ENSJJAG00000016178	Rtca	73	76.364	Jaculus_jaculus
ENSTBEG00000000943	RTCA	59	58.095	ENSKMAG00000006651	rtca	57	58.095	Kryptolebias_marmoratus
ENSTBEG00000000943	RTCA	65	51.261	ENSLBEG00000002448	-	52	62.500	Labrus_bergylta
ENSTBEG00000000943	RTCA	59	56.190	ENSLBEG00000028971	rtca	58	56.190	Labrus_bergylta
ENSTBEG00000000943	RTCA	81	54.622	ENSLACG00000013666	RTCA	58	65.421	Latimeria_chalumnae
ENSTBEG00000000943	RTCA	59	62.136	ENSLOCG00000000093	rtca	57	62.136	Lepisosteus_oculatus
ENSTBEG00000000943	RTCA	82	63.866	ENSLAFG00000001473	RTCA	59	80.000	Loxodonta_africana
ENSTBEG00000000943	RTCA	82	68.067	ENSMFAG00000034132	RTCA	60	90.000	Macaca_fascicularis
ENSTBEG00000000943	RTCA	82	67.227	ENSMMUG00000019105	RTCA	60	90.000	Macaca_mulatta
ENSTBEG00000000943	RTCA	63	68.067	ENSMNEG00000037163	RTCA	51	97.500	Macaca_nemestrina
ENSTBEG00000000943	RTCA	53	85.000	ENSMLEG00000042151	RTCA	53	85.000	Mandrillus_leucophaeus
ENSTBEG00000000943	RTCA	59	59.048	ENSMAMG00000016536	rtca	58	59.048	Mastacembelus_armatus
ENSTBEG00000000943	RTCA	61	54.545	ENSMZEG00005017945	rtca	59	54.545	Maylandia_zebra
ENSTBEG00000000943	RTCA	66	52.941	ENSMGAG00000006892	RTCA	52	83.333	Meleagris_gallopavo
ENSTBEG00000000943	RTCA	82	66.387	ENSMAUG00000008488	Rtca	59	79.091	Mesocricetus_auratus
ENSTBEG00000000943	RTCA	63	68.908	ENSMICG00000008643	RTCA	51	100.000	Microcebus_murinus
ENSTBEG00000000943	RTCA	82	67.227	ENSMOCG00000016660	Rtca	59	80.000	Microtus_ochrogaster
ENSTBEG00000000943	RTCA	63	48.739	ENSMMOG00000007750	rtca	51	60.000	Mola_mola
ENSTBEG00000000943	RTCA	82	63.025	ENSMODG00000003557	RTCA	59	79.091	Monodelphis_domestica
ENSTBEG00000000943	RTCA	59	58.095	ENSMALG00000020844	rtca	58	58.095	Monopterus_albus
ENSTBEG00000000943	RTCA	82	65.546	MGP_CAROLIEiJ_G0025565	Rtca	94	91.837	Mus_caroli
ENSTBEG00000000943	RTCA	82	64.706	ENSMUSG00000000339	Rtca	94	91.837	Mus_musculus
ENSTBEG00000000943	RTCA	82	65.546	MGP_PahariEiJ_G0027011	Rtca	94	91.837	Mus_pahari
ENSTBEG00000000943	RTCA	82	65.546	MGP_SPRETEiJ_G0026515	Rtca	94	91.837	Mus_spretus
ENSTBEG00000000943	RTCA	82	67.227	ENSMPUG00000012119	RTCA	59	81.818	Mustela_putorius_furo
ENSTBEG00000000943	RTCA	82	60.504	ENSMLUG00000009922	RTCA	59	74.775	Myotis_lucifugus
ENSTBEG00000000943	RTCA	81	66.387	ENSNGAG00000011540	Rtca	50	90.566	Nannospalax_galili
ENSTBEG00000000943	RTCA	61	54.545	ENSNBRG00000003062	rtca	59	54.545	Neolamprologus_brichardi
ENSTBEG00000000943	RTCA	82	66.387	ENSNLEG00000031426	RTCA	60	90.909	Nomascus_leucogenys
ENSTBEG00000000943	RTCA	81	67.227	ENSODEG00000006990	RTCA	59	75.926	Octodon_degus
ENSTBEG00000000943	RTCA	61	54.545	ENSONIG00000007753	rtca	59	54.545	Oreochromis_niloticus
ENSTBEG00000000943	RTCA	66	59.664	ENSOANG00000012055	RTCA	52	87.755	Ornithorhynchus_anatinus
ENSTBEG00000000943	RTCA	82	66.387	ENSOCUG00000014247	RTCA	59	82.727	Oryctolagus_cuniculus
ENSTBEG00000000943	RTCA	62	82.353	ENSORLG00000013605	rtca	58	56.190	Oryzias_latipes
ENSTBEG00000000943	RTCA	62	82.353	ENSORLG00020001904	rtca	58	56.190	Oryzias_latipes_hni
ENSTBEG00000000943	RTCA	62	82.353	ENSORLG00015021064	rtca	58	56.190	Oryzias_latipes_hsok
ENSTBEG00000000943	RTCA	80	51.261	ENSOMEG00000000756	rtca	58	55.238	Oryzias_melastigma
ENSTBEG00000000943	RTCA	82	68.067	ENSOGAG00000005627	RTCA	58	68.067	Otolemur_garnettii
ENSTBEG00000000943	RTCA	66	67.227	ENSOARG00000018122	RTCA	53	97.917	Ovis_aries
ENSTBEG00000000943	RTCA	82	66.387	ENSPPAG00000035119	RTCA	51	100.000	Pan_paniscus
ENSTBEG00000000943	RTCA	82	66.387	ENSPPRG00000000350	RTCA	60	85.088	Panthera_pardus
ENSTBEG00000000943	RTCA	82	66.387	ENSPTIG00000012816	RTCA	60	85.088	Panthera_tigris_altaica
ENSTBEG00000000943	RTCA	82	66.387	ENSPTRG00000001004	RTCA	51	100.000	Pan_troglodytes
ENSTBEG00000000943	RTCA	82	68.908	ENSPANG00000000346	RTCA	59	80.909	Papio_anubis
ENSTBEG00000000943	RTCA	59	62.500	ENSPKIG00000001653	rtca	57	62.500	Paramormyrops_kingsleyae
ENSTBEG00000000943	RTCA	82	57.143	ENSPSIG00000011408	RTCA	59	74.545	Pelodiscus_sinensis
ENSTBEG00000000943	RTCA	82	66.387	ENSPEMG00000018582	Rtca	59	79.091	Peromyscus_maniculatus_bairdii
ENSTBEG00000000943	RTCA	60	55.140	ENSPMAG00000009110	rtca	58	55.140	Petromyzon_marinus
ENSTBEG00000000943	RTCA	82	63.025	ENSPCIG00000007684	RTCA	59	80.909	Phascolarctos_cinereus
ENSTBEG00000000943	RTCA	80	53.782	ENSPFOG00000004824	rtca	58	58.095	Poecilia_formosa
ENSTBEG00000000943	RTCA	59	57.143	ENSPLAG00000011753	rtca	57	57.143	Poecilia_latipinna
ENSTBEG00000000943	RTCA	59	57.143	ENSPMEG00000020469	rtca	57	57.143	Poecilia_mexicana
ENSTBEG00000000943	RTCA	59	57.143	ENSPREG00000001365	rtca	57	57.143	Poecilia_reticulata
ENSTBEG00000000943	RTCA	82	67.227	ENSPPYG00000001115	RTCA	59	82.727	Pongo_abelii
ENSTBEG00000000943	RTCA	81	57.219	ENSPCAG00000005076	RTCA	58	83.810	Procavia_capensis
ENSTBEG00000000943	RTCA	82	68.067	ENSPCOG00000005603	RTCA	94	91.837	Propithecus_coquereli
ENSTBEG00000000943	RTCA	82	64.706	ENSPVAG00000009478	RTCA	60	90.000	Pteropus_vampyrus
ENSTBEG00000000943	RTCA	61	54.545	ENSPNYG00000004722	rtca	59	54.545	Pundamilia_nyererei
ENSTBEG00000000943	RTCA	59	59.615	ENSPNAG00000022270	rtca	57	59.615	Pygocentrus_nattereri
ENSTBEG00000000943	RTCA	82	65.546	ENSRNOG00000014575	Rtca	59	80.000	Rattus_norvegicus
ENSTBEG00000000943	RTCA	82	67.227	ENSRBIG00000041180	RTCA	60	90.000	Rhinopithecus_bieti
ENSTBEG00000000943	RTCA	82	67.227	ENSRROG00000024929	RTCA	60	90.000	Rhinopithecus_roxellana
ENSTBEG00000000943	RTCA	82	67.227	ENSSBOG00000028626	RTCA	60	87.273	Saimiri_boliviensis_boliviensis
ENSTBEG00000000943	RTCA	82	63.866	ENSSHAG00000001758	RTCA	59	81.818	Sarcophilus_harrisii
ENSTBEG00000000943	RTCA	59	54.808	ENSSMAG00000014680	rtca	56	54.808	Scophthalmus_maximus
ENSTBEG00000000943	RTCA	59	55.769	ENSSDUG00000015585	rtca	56	55.769	Seriola_dumerili
ENSTBEG00000000943	RTCA	57	57.895	ENSSLDG00000018985	rtca	54	57.895	Seriola_lalandi_dorsalis
ENSTBEG00000000943	RTCA	66	61.345	ENSSARG00000013993	RTCA	53	95.833	Sorex_araneus
ENSTBEG00000000943	RTCA	59	58.095	ENSSPAG00000011938	rtca	57	58.095	Stegastes_partitus
ENSTBEG00000000943	RTCA	82	67.227	ENSSSCG00000006865	RTCA	59	80.909	Sus_scrofa
ENSTBEG00000000943	RTCA	82	56.303	ENSTGUG00000005154	RTCA	59	72.727	Taeniopygia_guttata
ENSTBEG00000000943	RTCA	80	50.420	ENSTRUG00000008799	rtca	58	56.190	Takifugu_rubripes
ENSTBEG00000000943	RTCA	59	59.048	ENSTNIG00000004725	rtca	58	59.048	Tetraodon_nigroviridis
ENSTBEG00000000943	RTCA	82	68.067	ENSTTRG00000015327	RTCA	60	87.273	Tursiops_truncatus
ENSTBEG00000000943	RTCA	82	65.546	ENSUMAG00000007881	RTCA	59	81.818	Ursus_maritimus
ENSTBEG00000000943	RTCA	59	65.741	ENSXETG00000031661	RTCA	62	66.316	Xenopus_tropicalis
ENSTBEG00000000943	RTCA	59	57.143	ENSXMAG00000005482	rtca	57	57.143	Xiphophorus_maculatus