EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTBEG00000001085 (Gene tree)
Gene ID: -
Gene Symbol: DDX50
Alias: GU2|GUB|MGC3199|RH-II/GuB
Full Name: DExD-box helicase 50
Gene Type: protein_coding
Species: Tupaia_belangeri
Status: putative
Strand: Plus strand
Length: 50088 bases
Position: chrGeneScaffold_678:4116-54203
Accession: 17906
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTBEP00000000950	GUCT	PF08152.12	1.3e-27	1	1
ENSTBEP00000000950	ResIII	PF04851.15	7.5e-08	1	1
ENSTBEP00000000950	DEAD	PF00270.29	7.8e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTBET00000001098	DDX50-201	2214	-	ENSTBEP00000000950	737 (aa)	-	UPI0000F5E8FF

Gene Model

Click here to download ENSTBEG00000001085's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTBEG00000001085's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTBEG00000001085	DDX50	85	57.073	ENSTBEG00000002310	DDX21	75	50.980

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTBEG00000001085	DDX50	92	75.369	ENSG00000107625	DDX50	96	75.809	Homo_sapiens
ENSTBEG00000001085	DDX50	92	74.378	ENSAMEG00000017992	DDX50	96	74.438	Ailuropoda_melanoleuca
ENSTBEG00000001085	DDX50	82	68.522	ENSANAG00000017785	-	84	67.666	Aotus_nancymaae
ENSTBEG00000001085	DDX50	73	98.857	ENSBTAG00000033413	DDX50	83	97.059	Bos_taurus
ENSTBEG00000001085	DDX50	92	75.516	ENSCJAG00000018844	DDX50	96	75.809	Callithrix_jacchus
ENSTBEG00000001085	DDX50	93	74.636	ENSCAFG00000013776	DDX50	99	74.080	Canis_familiaris
ENSTBEG00000001085	DDX50	92	74.817	ENSCAFG00020025977	DDX50	96	74.860	Canis_lupus_dingo
ENSTBEG00000001085	DDX50	97	75.419	ENSCHIG00000000285	DDX50	96	74.824	Capra_hircus
ENSTBEG00000001085	DDX50	92	74.926	ENSTSYG00000004192	DDX50	96	75.246	Carlito_syrichta
ENSTBEG00000001085	DDX50	76	76.613	ENSCAPG00000007230	-	85	80.124	Cavia_aperea
ENSTBEG00000001085	DDX50	91	73.403	ENSCPOG00000002131	-	96	74.366	Cavia_porcellus
ENSTBEG00000001085	DDX50	76	94.624	ENSCCAG00000030543	DDX50	85	94.444	Cebus_capucinus
ENSTBEG00000001085	DDX50	90	75.113	ENSCATG00000032463	DDX50	96	72.817	Cercocebus_atys
ENSTBEG00000001085	DDX50	83	66.986	ENSCATG00000035153	-	85	66.116	Cercocebus_atys
ENSTBEG00000001085	DDX50	90	67.460	ENSCATG00000039259	-	86	66.270	Cercocebus_atys
ENSTBEG00000001085	DDX50	92	74.298	ENSCLAG00000012957	-	96	75.211	Chinchilla_lanigera
ENSTBEG00000001085	DDX50	87	66.514	ENSCLAG00000001938	-	84	69.266	Chinchilla_lanigera
ENSTBEG00000001085	DDX50	92	75.516	ENSCSAG00000007703	DDX50	96	75.809	Chlorocebus_sabaeus
ENSTBEG00000001085	DDX50	88	72.111	ENSCHOG00000000233	DDX50	97	71.649	Choloepus_hoffmanni
ENSTBEG00000001085	DDX50	82	84.298	ENSCANG00000036450	-	90	81.967	Colobus_angolensis_palliatus
ENSTBEG00000001085	DDX50	78	58.710	ENSCANG00000018820	-	81	58.065	Colobus_angolensis_palliatus
ENSTBEG00000001085	DDX50	81	65.072	ENSCANG00000028077	-	79	63.462	Colobus_angolensis_palliatus
ENSTBEG00000001085	DDX50	92	72.821	ENSCGRG00001020223	Ddx50	96	73.803	Cricetulus_griseus_chok1gshd
ENSTBEG00000001085	DDX50	91	72.849	ENSCGRG00000015884	Ddx50	92	72.821	Cricetulus_griseus_crigri
ENSTBEG00000001085	DDX50	87	66.872	ENSDNOG00000001675	DDX50	100	66.872	Dasypus_novemcinctus
ENSTBEG00000001085	DDX50	92	73.599	ENSDORG00000007310	Ddx50	96	74.121	Dipodomys_ordii
ENSTBEG00000001085	DDX50	78	86.854	ENSETEG00000014069	DDX50	78	84.977	Echinops_telfairi
ENSTBEG00000001085	DDX50	92	74.340	ENSEASG00005015595	DDX50	96	74.543	Equus_asinus_asinus
ENSTBEG00000001085	DDX50	92	74.340	ENSECAG00000023044	DDX50	96	74.543	Equus_caballus
ENSTBEG00000001085	DDX50	86	93.103	ENSEEUG00000005782	DDX50	79	93.103	Erinaceus_europaeus
ENSTBEG00000001085	DDX50	92	74.669	ENSFCAG00000012678	DDX50	96	75.000	Felis_catus
ENSTBEG00000001085	DDX50	92	67.404	ENSFDAG00000016109	-	96	68.354	Fukomys_damarensis
ENSTBEG00000001085	DDX50	99	72.154	ENSGGOG00000010100	DDX50	96	75.809	Gorilla_gorilla
ENSTBEG00000001085	DDX50	92	72.714	ENSHGLG00000013466	DDX50	100	73.577	Heterocephalus_glaber_female
ENSTBEG00000001085	DDX50	92	72.714	ENSHGLG00100017191	DDX50	100	73.577	Heterocephalus_glaber_male
ENSTBEG00000001085	DDX50	65	91.667	ENSHGLG00100006568	-	75	91.667	Heterocephalus_glaber_male
ENSTBEG00000001085	DDX50	97	73.501	ENSSTOG00000021852	-	96	72.893	Ictidomys_tridecemlineatus
ENSTBEG00000001085	DDX50	100	73.035	ENSJJAG00000023928	-	96	72.996	Jaculus_jaculus
ENSTBEG00000001085	DDX50	90	68.724	ENSJJAG00000019626	-	84	67.355	Jaculus_jaculus
ENSTBEG00000001085	DDX50	92	74.926	ENSLAFG00000006186	DDX50	92	74.484	Loxodonta_africana
ENSTBEG00000001085	DDX50	85	65.315	ENSMFAG00000045339	-	88	64.865	Macaca_fascicularis
ENSTBEG00000001085	DDX50	92	75.516	ENSMFAG00000044067	DDX50	96	75.809	Macaca_fascicularis
ENSTBEG00000001085	DDX50	80	60.714	ENSMMUG00000045343	-	84	56.471	Macaca_mulatta
ENSTBEG00000001085	DDX50	92	75.516	ENSMMUG00000001006	DDX50	96	75.809	Macaca_mulatta
ENSTBEG00000001085	DDX50	83	70.192	ENSMNEG00000045530	-	84	70.192	Macaca_nemestrina
ENSTBEG00000001085	DDX50	92	68.584	ENSMNEG00000031664	DDX50	96	69.198	Macaca_nemestrina
ENSTBEG00000001085	DDX50	83	68.421	ENSMLEG00000041988	-	85	66.827	Mandrillus_leucophaeus
ENSTBEG00000001085	DDX50	92	73.451	ENSMLEG00000037313	DDX50	96	73.840	Mandrillus_leucophaeus
ENSTBEG00000001085	DDX50	84	83.012	ENSMICG00000017539	DDX50	84	92.090	Microcebus_murinus
ENSTBEG00000001085	DDX50	92	72.647	ENSMOCG00000001676	Ddx50	96	73.174	Microtus_ochrogaster
ENSTBEG00000001085	DDX50	92	59.708	ENSMODG00000010741	DDX50	92	60.234	Monodelphis_domestica
ENSTBEG00000001085	DDX50	92	72.083	MGP_CAROLIEiJ_G0015389	Ddx50	96	73.239	Mus_caroli
ENSTBEG00000001085	DDX50	92	72.378	ENSMUSG00000020076	Ddx50	96	73.521	Mus_musculus
ENSTBEG00000001085	DDX50	92	72.526	MGP_PahariEiJ_G0030805	Ddx50	96	73.662	Mus_pahari
ENSTBEG00000001085	DDX50	92	72.378	MGP_SPRETEiJ_G0016200	Ddx50	96	73.521	Mus_spretus
ENSTBEG00000001085	DDX50	88	72.798	ENSMPUG00000004589	DDX50	99	72.798	Mustela_putorius_furo
ENSTBEG00000001085	DDX50	92	72.861	ENSMLUG00000017590	DDX50	96	72.996	Myotis_lucifugus
ENSTBEG00000001085	DDX50	92	73.599	ENSNGAG00000004283	Ddx50	96	74.085	Nannospalax_galili
ENSTBEG00000001085	DDX50	99	72.291	ENSNLEG00000011631	DDX50	96	75.809	Nomascus_leucogenys
ENSTBEG00000001085	DDX50	81	56.436	ENSNLEG00000035506	-	71	66.792	Nomascus_leucogenys
ENSTBEG00000001085	DDX50	92	72.674	ENSOPRG00000001619	DDX50	92	72.674	Ochotona_princeps
ENSTBEG00000001085	DDX50	92	73.264	ENSODEG00000014597	-	96	74.225	Octodon_degus
ENSTBEG00000001085	DDX50	92	50.218	ENSOANG00000004776	DDX50	76	51.256	Ornithorhynchus_anatinus
ENSTBEG00000001085	DDX50	94	72.270	ENSOCUG00000002879	DDX50	95	73.117	Oryctolagus_cuniculus
ENSTBEG00000001085	DDX50	92	74.631	ENSOGAG00000001844	DDX50	96	74.965	Otolemur_garnettii
ENSTBEG00000001085	DDX50	97	75.140	ENSOARG00000005264	DDX50	96	74.543	Ovis_aries
ENSTBEG00000001085	DDX50	99	72.428	ENSPPAG00000040723	DDX50	96	75.668	Pan_paniscus
ENSTBEG00000001085	DDX50	92	74.669	ENSPPRG00000015826	DDX50	96	75.000	Panthera_pardus
ENSTBEG00000001085	DDX50	92	74.669	ENSPTIG00000008454	DDX50	96	75.000	Panthera_tigris_altaica
ENSTBEG00000001085	DDX50	99	72.428	ENSPTRG00000002562	DDX50	96	75.668	Pan_troglodytes
ENSTBEG00000001085	DDX50	99	65.706	ENSPANG00000022143	-	96	68.776	Papio_anubis
ENSTBEG00000001085	DDX50	92	71.787	ENSPEMG00000020899	-	92	71.787	Peromyscus_maniculatus_bairdii
ENSTBEG00000001085	DDX50	91	59.352	ENSPCIG00000016036	DDX50	94	59.824	Phascolarctos_cinereus
ENSTBEG00000001085	DDX50	83	73.573	ENSPPYG00000002390	DDX50	96	73.988	Pongo_abelii
ENSTBEG00000001085	DDX50	70	91.304	ENSPCAG00000009692	DDX50	84	89.617	Procavia_capensis
ENSTBEG00000001085	DDX50	56	93.548	ENSPCOG00000012574	DDX50	74	93.651	Propithecus_coquereli
ENSTBEG00000001085	DDX50	77	77.686	ENSPVAG00000009519	DDX50	77	77.686	Pteropus_vampyrus
ENSTBEG00000001085	DDX50	92	72.378	ENSRNOG00000000396	Ddx50	96	73.521	Rattus_norvegicus
ENSTBEG00000001085	DDX50	87	72.473	ENSRBIG00000042841	-	98	72.162	Rhinopithecus_bieti
ENSTBEG00000001085	DDX50	82	72.249	ENSRBIG00000039673	-	78	70.673	Rhinopithecus_bieti
ENSTBEG00000001085	DDX50	91	58.118	ENSRBIG00000036573	-	93	57.143	Rhinopithecus_bieti
ENSTBEG00000001085	DDX50	91	55.556	ENSRROG00000022853	-	93	54.688	Rhinopithecus_roxellana
ENSTBEG00000001085	DDX50	99	72.291	ENSRROG00000032158	DDX50	96	75.527	Rhinopithecus_roxellana
ENSTBEG00000001085	DDX50	66	97.561	ENSSBOG00000014441	DDX50	84	97.561	Saimiri_boliviensis_boliviensis
ENSTBEG00000001085	DDX50	88	59.970	ENSSHAG00000005690	DDX50	91	60.395	Sarcophilus_harrisii
ENSTBEG00000001085	DDX50	75	50.090	ENSSHAG00000005334	-	80	47.690	Sarcophilus_harrisii
ENSTBEG00000001085	DDX50	97	73.464	ENSSARG00000013553	DDX50	88	78.915	Sorex_araneus
ENSTBEG00000001085	DDX50	77	93.780	ENSSSCG00000010246	DDX50	83	94.118	Sus_scrofa
ENSTBEG00000001085	DDX50	85	88.732	ENSTTRG00000012408	DDX50	85	86.854	Tursiops_truncatus
ENSTBEG00000001085	DDX50	92	74.671	ENSUAMG00000010976	DDX50	96	74.719	Ursus_americanus
ENSTBEG00000001085	DDX50	92	74.671	ENSUMAG00000007726	DDX50	96	74.719	Ursus_maritimus
ENSTBEG00000001085	DDX50	92	73.894	ENSVPAG00000000626	DDX50	96	74.402	Vicugna_pacos
ENSTBEG00000001085	DDX50	71	90.610	ENSVVUG00000020366	DDX50	89	89.671	Vulpes_vulpes