EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTBEG00000001178 (Gene tree)
Gene ID: -
Gene Symbol: SBDS
Alias: CGI-97|FLJ10917|SDS|SWDS
Full Name: SBDS%2C ribosome maturation factor
Gene Type: protein_coding
Species: Tupaia_belangeri
Status: putative
Strand: Minus strand
Length: 3950 bases
Position: chrGeneScaffold_3416:140198-144147
Accession: 19440
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTBEP00000001011	SBDS	PF01172.18	1.3e-33	1	1
ENSTBEP00000001011	SBDS_C	PF09377.10	1.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTBET00000001172	SBDS-201	597	-	ENSTBEP00000001011	199 (aa)	-	UPI0000F5F3E5

Gene Model

Click here to download ENSTBEG00000001178's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTBEG00000001178's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTBEG00000001178	SBDS	100	84.135	ENSG00000126524	SBDS	97	97.590	Homo_sapiens
ENSTBEG00000001178	SBDS	100	70.673	ENSAPOG00000014285	sbds	84	70.673	Acanthochromis_polyacanthus
ENSTBEG00000001178	SBDS	100	83.654	ENSAMEG00000018167	SBDS	83	83.654	Ailuropoda_melanoleuca
ENSTBEG00000001178	SBDS	100	71.154	ENSACIG00000007308	sbds	83	71.154	Amphilophus_citrinellus
ENSTBEG00000001178	SBDS	100	70.673	ENSAOCG00000016770	sbds	84	70.673	Amphiprion_ocellaris
ENSTBEG00000001178	SBDS	100	71.154	ENSAPEG00000015897	sbds	84	71.154	Amphiprion_percula
ENSTBEG00000001178	SBDS	100	70.192	ENSATEG00000006901	sbds	84	70.192	Anabas_testudineus
ENSTBEG00000001178	SBDS	100	78.365	ENSANAG00000024342	-	95	84.337	Aotus_nancymaae
ENSTBEG00000001178	SBDS	78	80.000	ENSANAG00000037501	-	80	80.000	Aotus_nancymaae
ENSTBEG00000001178	SBDS	100	71.154	ENSACLG00000018750	sbds	84	71.154	Astatotilapia_calliptera
ENSTBEG00000001178	SBDS	100	71.154	ENSAMXG00000005361	sbds	83	71.154	Astyanax_mexicanus
ENSTBEG00000001178	SBDS	100	84.135	ENSBTAG00000004051	SBDS	83	84.135	Bos_taurus
ENSTBEG00000001178	SBDS	96	49.751	WBGene00021063	sbds-1	79	49.751	Caenorhabditis_elegans
ENSTBEG00000001178	SBDS	100	83.654	ENSCJAG00000041007	SBDS	83	83.654	Callithrix_jacchus
ENSTBEG00000001178	SBDS	100	80.476	ENSCAFG00000010797	SBDS	83	80.476	Canis_familiaris
ENSTBEG00000001178	SBDS	100	83.173	ENSCAFG00020005357	SBDS	83	83.173	Canis_lupus_dingo
ENSTBEG00000001178	SBDS	100	84.135	ENSCHIG00000026854	SBDS	83	84.135	Capra_hircus
ENSTBEG00000001178	SBDS	100	84.135	ENSTSYG00000033822	SBDS	83	84.135	Carlito_syrichta
ENSTBEG00000001178	SBDS	57	74.590	ENSCAPG00000006634	SBDS	74	74.590	Cavia_aperea
ENSTBEG00000001178	SBDS	100	84.135	ENSCPOG00000036143	SBDS	83	84.135	Cavia_porcellus
ENSTBEG00000001178	SBDS	100	83.654	ENSCCAG00000020671	SBDS	93	97.590	Cebus_capucinus
ENSTBEG00000001178	SBDS	100	84.135	ENSCATG00000039026	SBDS	83	84.135	Cercocebus_atys
ENSTBEG00000001178	SBDS	100	83.654	ENSCLAG00000005721	-	83	83.654	Chinchilla_lanigera
ENSTBEG00000001178	SBDS	99	63.500	ENSCLAG00000002113	-	80	63.500	Chinchilla_lanigera
ENSTBEG00000001178	SBDS	100	84.135	ENSCSAG00000018275	SBDS	83	84.135	Chlorocebus_sabaeus
ENSTBEG00000001178	SBDS	100	86.957	ENSCHOG00000003795	SBDS	83	86.957	Choloepus_hoffmanni
ENSTBEG00000001178	SBDS	100	74.519	ENSCPBG00000014893	SBDS	83	74.519	Chrysemys_picta_bellii
ENSTBEG00000001178	SBDS	100	57.895	ENSCSAVG00000011811	-	84	57.895	Ciona_savignyi
ENSTBEG00000001178	SBDS	100	83.654	ENSCANG00000032368	SBDS	83	83.654	Colobus_angolensis_palliatus
ENSTBEG00000001178	SBDS	57	72.131	ENSCGRG00001019886	Sbds	74	72.131	Cricetulus_griseus_chok1gshd
ENSTBEG00000001178	SBDS	78	78.788	ENSCGRG00000009211	Sbds	91	78.788	Cricetulus_griseus_crigri
ENSTBEG00000001178	SBDS	100	69.231	ENSCSEG00000005798	sbds	84	69.231	Cynoglossus_semilaevis
ENSTBEG00000001178	SBDS	94	71.574	ENSCVAG00000001053	sbds	84	70.192	Cyprinodon_variegatus
ENSTBEG00000001178	SBDS	100	71.154	ENSDARG00000027803	sbds	83	71.154	Danio_rerio
ENSTBEG00000001178	SBDS	100	84.615	ENSDNOG00000041174	SBDS	83	84.615	Dasypus_novemcinctus
ENSTBEG00000001178	SBDS	100	82.692	ENSDORG00000026218	Sbds	83	82.692	Dipodomys_ordii
ENSTBEG00000001178	SBDS	97	52.217	FBgn0035714	CG8549	72	54.696	Drosophila_melanogaster
ENSTBEG00000001178	SBDS	91	47.644	ENSEBUG00000015780	sbds	81	47.644	Eptatretus_burgeri
ENSTBEG00000001178	SBDS	100	84.615	ENSEASG00005008821	SBDS	83	84.615	Equus_asinus_asinus
ENSTBEG00000001178	SBDS	100	84.615	ENSECAG00000008202	SBDS	83	84.615	Equus_caballus
ENSTBEG00000001178	SBDS	100	61.538	ENSEEUG00000004768	SBDS	100	61.538	Erinaceus_europaeus
ENSTBEG00000001178	SBDS	100	69.712	ENSELUG00000008382	sbds	83	69.712	Esox_lucius
ENSTBEG00000001178	SBDS	100	84.135	ENSFCAG00000022142	SBDS	83	84.135	Felis_catus
ENSTBEG00000001178	SBDS	100	75.000	ENSFALG00000013808	SBDS	83	75.000	Ficedula_albicollis
ENSTBEG00000001178	SBDS	100	84.135	ENSFDAG00000018947	-	83	84.135	Fukomys_damarensis
ENSTBEG00000001178	SBDS	94	69.036	ENSFHEG00000000708	sbds	84	67.788	Fundulus_heteroclitus
ENSTBEG00000001178	SBDS	100	70.673	ENSGMOG00000018356	sbds	83	70.673	Gadus_morhua
ENSTBEG00000001178	SBDS	100	75.481	ENSGALG00000027989	SBDS	83	75.481	Gallus_gallus
ENSTBEG00000001178	SBDS	85	67.416	ENSGAFG00000014204	sbds	82	66.138	Gambusia_affinis
ENSTBEG00000001178	SBDS	100	69.231	ENSGACG00000012697	sbds	84	69.231	Gasterosteus_aculeatus
ENSTBEG00000001178	SBDS	82	72.674	ENSGAGG00000022402	SBDS	80	72.674	Gopherus_agassizii
ENSTBEG00000001178	SBDS	95	61.307	ENSGGOG00000040023	-	73	61.307	Gorilla_gorilla
ENSTBEG00000001178	SBDS	100	71.154	ENSHBUG00000002660	sbds	84	71.154	Haplochromis_burtoni
ENSTBEG00000001178	SBDS	100	82.212	ENSHGLG00000009671	SBDS	83	82.212	Heterocephalus_glaber_female
ENSTBEG00000001178	SBDS	100	82.212	ENSHGLG00100011332	SBDS	83	82.212	Heterocephalus_glaber_male
ENSTBEG00000001178	SBDS	100	70.673	ENSHCOG00000018606	sbds	84	70.673	Hippocampus_comes
ENSTBEG00000001178	SBDS	100	72.596	ENSIPUG00000006536	sbds	83	72.596	Ictalurus_punctatus
ENSTBEG00000001178	SBDS	100	67.488	ENSJJAG00000003934	-	80	67.488	Jaculus_jaculus
ENSTBEG00000001178	SBDS	100	79.327	ENSJJAG00000012033	-	83	79.327	Jaculus_jaculus
ENSTBEG00000001178	SBDS	53	86.667	ENSJJAG00000013791	-	100	86.667	Jaculus_jaculus
ENSTBEG00000001178	SBDS	100	70.673	ENSKMAG00000018542	sbds	84	70.673	Kryptolebias_marmoratus
ENSTBEG00000001178	SBDS	100	67.308	ENSLBEG00000016687	sbds	84	67.308	Labrus_bergylta
ENSTBEG00000001178	SBDS	100	56.132	ENSLACG00000018916	SBDS	83	56.132	Latimeria_chalumnae
ENSTBEG00000001178	SBDS	100	74.038	ENSLOCG00000004073	sbds	83	74.038	Lepisosteus_oculatus
ENSTBEG00000001178	SBDS	100	82.692	ENSLAFG00000008763	SBDS	83	82.692	Loxodonta_africana
ENSTBEG00000001178	SBDS	100	84.135	ENSMFAG00000032620	SBDS	83	84.135	Macaca_fascicularis
ENSTBEG00000001178	SBDS	100	84.135	ENSMMUG00000045653	SBDS	83	84.135	Macaca_mulatta
ENSTBEG00000001178	SBDS	100	84.135	ENSMNEG00000031523	SBDS	83	84.135	Macaca_nemestrina
ENSTBEG00000001178	SBDS	68	78.523	ENSMLEG00000036826	SBDS	71	78.523	Mandrillus_leucophaeus
ENSTBEG00000001178	SBDS	100	70.673	ENSMAMG00000016062	sbds	84	70.673	Mastacembelus_armatus
ENSTBEG00000001178	SBDS	100	71.154	ENSMZEG00005024385	sbds	84	71.154	Maylandia_zebra
ENSTBEG00000001178	SBDS	100	75.481	ENSMGAG00000002119	SBDS	83	75.481	Meleagris_gallopavo
ENSTBEG00000001178	SBDS	51	86.139	ENSMAUG00000004862	-	89	86.139	Mesocricetus_auratus
ENSTBEG00000001178	SBDS	99	61.836	ENSMAUG00000022214	-	80	61.836	Mesocricetus_auratus
ENSTBEG00000001178	SBDS	100	84.135	ENSMICG00000014366	SBDS	89	96.471	Microcebus_murinus
ENSTBEG00000001178	SBDS	100	83.173	ENSMOCG00000011739	Sbds	83	83.173	Microtus_ochrogaster
ENSTBEG00000001178	SBDS	92	69.792	ENSMMOG00000005061	sbds	73	68.852	Mola_mola
ENSTBEG00000001178	SBDS	100	82.212	ENSMODG00000006644	SBDS	83	82.212	Monodelphis_domestica
ENSTBEG00000001178	SBDS	100	70.673	ENSMALG00000010219	sbds	84	70.673	Monopterus_albus
ENSTBEG00000001178	SBDS	100	84.135	MGP_CAROLIEiJ_G0027800	Sbds	100	100.000	Mus_caroli
ENSTBEG00000001178	SBDS	100	84.135	ENSMUSG00000025337	Sbds	100	100.000	Mus_musculus
ENSTBEG00000001178	SBDS	100	83.654	MGP_PahariEiJ_G0024384	Sbds	100	100.000	Mus_pahari
ENSTBEG00000001178	SBDS	100	84.135	MGP_SPRETEiJ_G0028798	Sbds	100	100.000	Mus_spretus
ENSTBEG00000001178	SBDS	59	70.635	ENSMPUG00000016192	SBDS	72	70.635	Mustela_putorius_furo
ENSTBEG00000001178	SBDS	66	75.714	ENSMLUG00000013575	SBDS	77	75.714	Myotis_lucifugus
ENSTBEG00000001178	SBDS	100	83.654	ENSNGAG00000012093	Sbds	83	83.654	Nannospalax_galili
ENSTBEG00000001178	SBDS	100	71.154	ENSNBRG00000017027	sbds	84	71.154	Neolamprologus_brichardi
ENSTBEG00000001178	SBDS	100	84.135	ENSNLEG00000013288	SBDS	91	95.455	Nomascus_leucogenys
ENSTBEG00000001178	SBDS	100	81.250	ENSOPRG00000008721	SBDS	83	81.250	Ochotona_princeps
ENSTBEG00000001178	SBDS	100	58.654	ENSODEG00000000137	-	69	62.981	Octodon_degus
ENSTBEG00000001178	SBDS	100	69.118	ENSODEG00000001116	-	82	69.118	Octodon_degus
ENSTBEG00000001178	SBDS	100	75.481	ENSODEG00000019253	-	70	75.962	Octodon_degus
ENSTBEG00000001178	SBDS	100	70.673	ENSONIG00000005874	sbds	84	70.673	Oreochromis_niloticus
ENSTBEG00000001178	SBDS	78	74.545	ENSOANG00000007674	-	80	74.545	Ornithorhynchus_anatinus
ENSTBEG00000001178	SBDS	100	81.731	ENSOCUG00000003170	SBDS	83	81.731	Oryctolagus_cuniculus
ENSTBEG00000001178	SBDS	94	70.051	ENSORLG00000023489	sbds	84	68.750	Oryzias_latipes
ENSTBEG00000001178	SBDS	94	70.051	ENSORLG00020019282	sbds	84	68.750	Oryzias_latipes_hni
ENSTBEG00000001178	SBDS	94	70.051	ENSORLG00015008005	sbds	84	68.750	Oryzias_latipes_hsok
ENSTBEG00000001178	SBDS	100	70.192	ENSOMEG00000022747	sbds	84	70.192	Oryzias_melastigma
ENSTBEG00000001178	SBDS	100	65.865	ENSOGAG00000015036	-	83	65.865	Otolemur_garnettii
ENSTBEG00000001178	SBDS	100	84.615	ENSOGAG00000009011	-	83	84.615	Otolemur_garnettii
ENSTBEG00000001178	SBDS	100	84.135	ENSOARG00000010609	SBDS	83	84.135	Ovis_aries
ENSTBEG00000001178	SBDS	100	84.135	ENSPPAG00000043889	-	83	84.135	Pan_paniscus
ENSTBEG00000001178	SBDS	100	84.135	ENSPPRG00000002307	SBDS	83	84.135	Panthera_pardus
ENSTBEG00000001178	SBDS	100	84.135	ENSPTIG00000021308	SBDS	83	84.135	Panthera_tigris_altaica
ENSTBEG00000001178	SBDS	100	84.135	ENSPTRG00000019254	SBDS	83	84.135	Pan_troglodytes
ENSTBEG00000001178	SBDS	100	68.269	ENSPTRG00000050835	-	81	68.269	Pan_troglodytes
ENSTBEG00000001178	SBDS	100	84.135	ENSPTRG00000048174	-	92	84.135	Pan_troglodytes
ENSTBEG00000001178	SBDS	100	67.788	ENSPTRG00000047744	-	81	67.788	Pan_troglodytes
ENSTBEG00000001178	SBDS	100	83.654	ENSPANG00000004078	SBDS	83	83.654	Papio_anubis
ENSTBEG00000001178	SBDS	100	69.712	ENSPKIG00000006489	sbds	83	71.154	Paramormyrops_kingsleyae
ENSTBEG00000001178	SBDS	78	72.727	ENSPSIG00000014603	SBDS	79	72.727	Pelodiscus_sinensis
ENSTBEG00000001178	SBDS	100	70.192	ENSPMGG00000004246	sbds	84	70.192	Periophthalmus_magnuspinnatus
ENSTBEG00000001178	SBDS	100	83.173	ENSPEMG00000008728	Sbds	83	83.173	Peromyscus_maniculatus_bairdii
ENSTBEG00000001178	SBDS	100	81.731	ENSPCIG00000029718	SBDS	83	81.731	Phascolarctos_cinereus
ENSTBEG00000001178	SBDS	94	70.558	ENSPFOG00000015837	sbds	84	69.231	Poecilia_formosa
ENSTBEG00000001178	SBDS	94	70.558	ENSPLAG00000003641	sbds	84	69.231	Poecilia_latipinna
ENSTBEG00000001178	SBDS	94	70.558	ENSPMEG00000019483	sbds	84	69.231	Poecilia_mexicana
ENSTBEG00000001178	SBDS	94	70.558	ENSPREG00000018758	sbds	84	69.231	Poecilia_reticulata
ENSTBEG00000001178	SBDS	100	84.135	ENSPPYG00000017513	SBDS	83	84.135	Pongo_abelii
ENSTBEG00000001178	SBDS	100	84.615	ENSPCOG00000021098	SBDS	88	97.619	Propithecus_coquereli
ENSTBEG00000001178	SBDS	100	84.135	ENSPVAG00000009369	SBDS	83	84.135	Pteropus_vampyrus
ENSTBEG00000001178	SBDS	100	71.154	ENSPNYG00000022403	sbds	84	71.154	Pundamilia_nyererei
ENSTBEG00000001178	SBDS	100	72.115	ENSPNAG00000001120	sbds	83	72.115	Pygocentrus_nattereri
ENSTBEG00000001178	SBDS	100	83.654	ENSRNOG00000000888	Sbds	83	83.654	Rattus_norvegicus
ENSTBEG00000001178	SBDS	100	84.135	ENSRBIG00000035557	SBDS	83	84.135	Rhinopithecus_bieti
ENSTBEG00000001178	SBDS	100	74.627	ENSRROG00000041986	-	85	72.637	Rhinopithecus_roxellana
ENSTBEG00000001178	SBDS	100	84.135	ENSRROG00000040842	-	83	84.135	Rhinopithecus_roxellana
ENSTBEG00000001178	SBDS	95	40.796	YLR022C	-	71	43.503	Saccharomyces_cerevisiae
ENSTBEG00000001178	SBDS	91	81.579	ENSSBOG00000022460	SBDS	82	81.579	Saimiri_boliviensis_boliviensis
ENSTBEG00000001178	SBDS	100	66.346	ENSSHAG00000010263	SBDS	83	66.346	Sarcophilus_harrisii
ENSTBEG00000001178	SBDS	100	72.596	ENSSFOG00015001108	sbds	83	72.596	Scleropages_formosus
ENSTBEG00000001178	SBDS	100	71.154	ENSSMAG00000020506	sbds	84	71.154	Scophthalmus_maximus
ENSTBEG00000001178	SBDS	100	70.673	ENSSDUG00000001528	sbds	84	70.673	Seriola_dumerili
ENSTBEG00000001178	SBDS	100	71.154	ENSSLDG00000003659	sbds	84	71.154	Seriola_lalandi_dorsalis
ENSTBEG00000001178	SBDS	68	83.448	ENSSARG00000013132	-	95	83.448	Sorex_araneus
ENSTBEG00000001178	SBDS	71	98.837	ENSSARG00000001899	-	56	98.837	Sorex_araneus
ENSTBEG00000001178	SBDS	100	73.077	ENSSPUG00000002699	SBDS	83	73.077	Sphenodon_punctatus
ENSTBEG00000001178	SBDS	100	70.673	ENSSPAG00000016419	sbds	83	61.722	Stegastes_partitus
ENSTBEG00000001178	SBDS	100	83.654	ENSSSCG00000007732	SBDS	83	83.654	Sus_scrofa
ENSTBEG00000001178	SBDS	57	65.041	ENSTGUG00000003426	SBDS	74	65.041	Taeniopygia_guttata
ENSTBEG00000001178	SBDS	100	71.154	ENSTRUG00000021443	sbds	84	71.154	Takifugu_rubripes
ENSTBEG00000001178	SBDS	100	69.712	ENSTNIG00000019000	sbds	84	69.712	Tetraodon_nigroviridis
ENSTBEG00000001178	SBDS	100	78.846	ENSTTRG00000003921	SBDS	83	78.846	Tursiops_truncatus
ENSTBEG00000001178	SBDS	100	83.654	ENSUAMG00000001326	SBDS	83	83.654	Ursus_americanus
ENSTBEG00000001178	SBDS	100	83.654	ENSUMAG00000015353	SBDS	83	83.654	Ursus_maritimus
ENSTBEG00000001178	SBDS	100	83.173	ENSVVUG00000016478	SBDS	83	83.173	Vulpes_vulpes
ENSTBEG00000001178	SBDS	100	73.558	ENSXETG00000010093	sbds	83	73.558	Xenopus_tropicalis
ENSTBEG00000001178	SBDS	97	70.443	ENSXCOG00000010639	sbds	90	70.443	Xiphophorus_couchianus
ENSTBEG00000001178	SBDS	97	70.443	ENSXMAG00000006065	sbds	90	70.443	Xiphophorus_maculatus