EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTBEG00000001241 (Gene tree)
Gene ID: -
Gene Symbol: MSI2
Alias: -
Full Name: musashi RNA binding protein 2
Gene Type: protein_coding
Species: Tupaia_belangeri
Status: putative
Strand: Plus strand
Length: 638065 bases
Position: chrGeneScaffold_4867:369151-1007215
Accession: 18585
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTBEP00000001089	RRM_1	PF00076.22	5.3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTBET00000001260	MSI2-201	972	-	ENSTBEP00000001089	323 (aa)	-	UPI0000F60A55

Gene Model

Click here to download ENSTBEG00000001241's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTBEG00000001241's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTBEG00000001241	MSI2	54	34.807	ENSTBEG00000002327	HNRNPD	70	34.000
ENSTBEG00000001241	MSI2	51	33.333	ENSTBEG00000016272	-	70	32.402
ENSTBEG00000001241	MSI2	52	31.765	ENSTBEG00000003219	-	69	31.765
ENSTBEG00000001241	MSI2	57	38.710	ENSTBEG00000002817	-	60	35.565
ENSTBEG00000001241	MSI2	51	33.333	ENSTBEG00000012511	-	64	33.333
ENSTBEG00000001241	MSI2	53	34.503	ENSTBEG00000008238	HNRNPA1	51	33.702

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTBEG00000001241	MSI2	73	82.645	ENSG00000153944	MSI2	91	86.957	Homo_sapiens
ENSTBEG00000001241	MSI2	73	77.686	ENSAPOG00000001658	msi2a	79	77.686	Acanthochromis_polyacanthus
ENSTBEG00000001241	MSI2	67	83.636	ENSAMEG00000002697	MSI2	68	83.636	Ailuropoda_melanoleuca
ENSTBEG00000001241	MSI2	73	73.529	ENSACIG00000009475	msi2a	60	73.529	Amphilophus_citrinellus
ENSTBEG00000001241	MSI2	73	77.686	ENSAPEG00000007706	msi2a	70	77.686	Amphiprion_percula
ENSTBEG00000001241	MSI2	59	81.250	ENSATEG00000003301	-	69	81.250	Anabas_testudineus
ENSTBEG00000001241	MSI2	73	77.686	ENSATEG00000010498	msi2a	79	77.686	Anabas_testudineus
ENSTBEG00000001241	MSI2	73	82.645	ENSANAG00000037827	MSI2	90	83.636	Aotus_nancymaae
ENSTBEG00000001241	MSI2	73	77.273	ENSACLG00000007752	msi2a	79	77.273	Astatotilapia_calliptera
ENSTBEG00000001241	MSI2	73	80.165	ENSAMXG00000010474	msi2b	73	81.818	Astyanax_mexicanus
ENSTBEG00000001241	MSI2	73	78.512	ENSAMXG00000032796	msi2a	74	78.512	Astyanax_mexicanus
ENSTBEG00000001241	MSI2	73	80.992	ENSBTAG00000004406	MSI2	75	80.992	Bos_taurus
ENSTBEG00000001241	MSI2	71	48.988	WBGene00003423	msi-1	77	48.988	Caenorhabditis_elegans
ENSTBEG00000001241	MSI2	73	82.645	ENSCJAG00000013998	MSI2	90	83.636	Callithrix_jacchus
ENSTBEG00000001241	MSI2	62	84.653	ENSCAFG00020025620	MSI2	70	83.333	Canis_lupus_dingo
ENSTBEG00000001241	MSI2	73	80.992	ENSCHIG00000016580	MSI2	74	80.992	Capra_hircus
ENSTBEG00000001241	MSI2	60	80.102	ENSCPOG00000034042	MSI2	69	80.102	Cavia_porcellus
ENSTBEG00000001241	MSI2	73	82.645	ENSCCAG00000033927	MSI2	90	83.636	Cebus_capucinus
ENSTBEG00000001241	MSI2	70	82.251	ENSCATG00000040879	MSI2	90	83.636	Cercocebus_atys
ENSTBEG00000001241	MSI2	73	82.645	ENSCLAG00000014325	MSI2	87	73.214	Chinchilla_lanigera
ENSTBEG00000001241	MSI2	73	82.645	ENSCSAG00000005633	MSI2	74	82.645	Chlorocebus_sabaeus
ENSTBEG00000001241	MSI2	54	84.746	ENSCHOG00000008660	MSI2	63	84.746	Choloepus_hoffmanni
ENSTBEG00000001241	MSI2	73	70.588	ENSCPBG00000009942	MSI2	81	84.530	Chrysemys_picta_bellii
ENSTBEG00000001241	MSI2	64	54.299	ENSCSAVG00000010397	-	71	53.509	Ciona_savignyi
ENSTBEG00000001241	MSI2	67	83.636	ENSCANG00000036414	MSI2	90	83.636	Colobus_angolensis_palliatus
ENSTBEG00000001241	MSI2	73	82.231	ENSCGRG00001013330	Msi2	74	82.231	Cricetulus_griseus_chok1gshd
ENSTBEG00000001241	MSI2	67	83.636	ENSCGRG00000003141	Msi2	68	83.636	Cricetulus_griseus_crigri
ENSTBEG00000001241	MSI2	57	75.556	ENSCSEG00000013549	msi2a	76	75.556	Cynoglossus_semilaevis
ENSTBEG00000001241	MSI2	73	73.750	ENSCSEG00000003266	-	73	73.750	Cynoglossus_semilaevis
ENSTBEG00000001241	MSI2	73	77.686	ENSCVAG00000017075	msi2a	79	77.686	Cyprinodon_variegatus
ENSTBEG00000001241	MSI2	73	79.339	ENSDARG00000032614	msi2b	100	82.292	Danio_rerio
ENSTBEG00000001241	MSI2	73	77.273	ENSDARG00000033901	msi2a	62	77.273	Danio_rerio
ENSTBEG00000001241	MSI2	62	84.653	ENSDNOG00000014501	MSI2	70	84.653	Dasypus_novemcinctus
ENSTBEG00000001241	MSI2	51	84.071	ENSDORG00000028440	-	100	84.071	Dipodomys_ordii
ENSTBEG00000001241	MSI2	67	58.850	FBgn0260943	Rbp6	88	56.944	Drosophila_melanogaster
ENSTBEG00000001241	MSI2	62	72.906	ENSEBUG00000006732	msi2a	56	72.906	Eptatretus_burgeri
ENSTBEG00000001241	MSI2	67	83.636	ENSEASG00005002965	MSI2	62	83.636	Equus_asinus_asinus
ENSTBEG00000001241	MSI2	73	82.645	ENSECAG00000011435	MSI2	77	82.645	Equus_caballus
ENSTBEG00000001241	MSI2	55	68.333	ENSEEUG00000007810	MSI2	72	68.333	Erinaceus_europaeus
ENSTBEG00000001241	MSI2	73	78.926	ENSELUG00000011747	msi2a	80	78.632	Esox_lucius
ENSTBEG00000001241	MSI2	73	78.189	ENSELUG00000001361	msi2b	80	77.941	Esox_lucius
ENSTBEG00000001241	MSI2	73	82.645	ENSFCAG00000041686	MSI2	90	83.636	Felis_catus
ENSTBEG00000001241	MSI2	67	83.636	ENSFDAG00000016118	MSI2	68	83.636	Fukomys_damarensis
ENSTBEG00000001241	MSI2	73	77.686	ENSFHEG00000000084	msi2a	85	77.778	Fundulus_heteroclitus
ENSTBEG00000001241	MSI2	55	71.154	ENSGMOG00000007596	-	100	71.154	Gadus_morhua
ENSTBEG00000001241	MSI2	73	79.339	ENSGALG00000005567	MSI2	70	79.339	Gallus_gallus
ENSTBEG00000001241	MSI2	73	64.609	ENSGAFG00000006974	msi2a	81	77.778	Gambusia_affinis
ENSTBEG00000001241	MSI2	73	75.720	ENSGAGG00000016542	MSI2	63	83.854	Gopherus_agassizii
ENSTBEG00000001241	MSI2	67	83.636	ENSGGOG00000013182	MSI2	90	83.636	Gorilla_gorilla
ENSTBEG00000001241	MSI2	73	77.273	ENSHBUG00000020800	msi2a	79	77.273	Haplochromis_burtoni
ENSTBEG00000001241	MSI2	73	71.488	ENSHGLG00000012444	MSI2	77	76.190	Heterocephalus_glaber_female
ENSTBEG00000001241	MSI2	51	84.071	ENSHGLG00100004028	-	86	84.071	Heterocephalus_glaber_male
ENSTBEG00000001241	MSI2	73	77.686	ENSHCOG00000000266	msi2a	69	77.686	Hippocampus_comes
ENSTBEG00000001241	MSI2	73	70.293	ENSHCOG00000017241	-	58	70.293	Hippocampus_comes
ENSTBEG00000001241	MSI2	73	79.339	ENSIPUG00000003732	msi2b	70	79.339	Ictalurus_punctatus
ENSTBEG00000001241	MSI2	73	77.686	ENSIPUG00000021097	msi2a	79	77.686	Ictalurus_punctatus
ENSTBEG00000001241	MSI2	60	80.102	ENSSTOG00000007884	MSI2	69	80.102	Ictidomys_tridecemlineatus
ENSTBEG00000001241	MSI2	51	84.071	ENSJJAG00000009467	-	100	84.071	Jaculus_jaculus
ENSTBEG00000001241	MSI2	73	77.273	ENSKMAG00000009494	msi2a	74	77.273	Kryptolebias_marmoratus
ENSTBEG00000001241	MSI2	59	72.917	ENSLBEG00000026223	-	56	72.917	Labrus_bergylta
ENSTBEG00000001241	MSI2	73	77.686	ENSLBEG00000007061	msi2a	88	77.778	Labrus_bergylta
ENSTBEG00000001241	MSI2	52	72.727	ENSLACG00000016798	MSI2	98	69.231	Latimeria_chalumnae
ENSTBEG00000001241	MSI2	73	79.339	ENSLOCG00000004675	msi2b	100	65.854	Lepisosteus_oculatus
ENSTBEG00000001241	MSI2	67	83.636	ENSMFAG00000003775	MSI2	90	83.636	Macaca_fascicularis
ENSTBEG00000001241	MSI2	67	83.636	ENSMMUG00000002069	MSI2	90	83.636	Macaca_mulatta
ENSTBEG00000001241	MSI2	73	82.645	ENSMNEG00000045275	MSI2	90	83.636	Macaca_nemestrina
ENSTBEG00000001241	MSI2	67	83.636	ENSMLEG00000033888	MSI2	90	83.636	Mandrillus_leucophaeus
ENSTBEG00000001241	MSI2	73	77.686	ENSMAMG00000010503	msi2a	83	77.778	Mastacembelus_armatus
ENSTBEG00000001241	MSI2	73	77.686	ENSMAMG00000002488	-	88	77.037	Mastacembelus_armatus
ENSTBEG00000001241	MSI2	73	77.273	ENSMZEG00005007676	msi2a	79	77.273	Maylandia_zebra
ENSTBEG00000001241	MSI2	73	82.231	ENSMAUG00000003862	Msi2	70	82.231	Mesocricetus_auratus
ENSTBEG00000001241	MSI2	73	62.810	ENSMICG00000032913	-	69	62.810	Microcebus_murinus
ENSTBEG00000001241	MSI2	73	82.645	ENSMICG00000013598	-	90	83.636	Microcebus_murinus
ENSTBEG00000001241	MSI2	73	82.231	ENSMOCG00000005820	Msi2	70	82.231	Microtus_ochrogaster
ENSTBEG00000001241	MSI2	73	73.950	ENSMMOG00000008348	msi2a	78	70.992	Mola_mola
ENSTBEG00000001241	MSI2	73	77.686	ENSMALG00000000071	msi2a	79	77.778	Monopterus_albus
ENSTBEG00000001241	MSI2	73	82.231	MGP_CAROLIEiJ_G0016948	Msi2	100	84.071	Mus_caroli
ENSTBEG00000001241	MSI2	73	82.231	ENSMUSG00000069769	Msi2	100	84.071	Mus_musculus
ENSTBEG00000001241	MSI2	73	82.231	MGP_PahariEiJ_G0018079	Msi2	100	84.071	Mus_pahari
ENSTBEG00000001241	MSI2	73	82.231	MGP_SPRETEiJ_G0017795	Msi2	100	84.071	Mus_spretus
ENSTBEG00000001241	MSI2	67	83.636	ENSMPUG00000015377	MSI2	70	83.636	Mustela_putorius_furo
ENSTBEG00000001241	MSI2	67	83.182	ENSMLUG00000007865	MSI2	70	83.182	Myotis_lucifugus
ENSTBEG00000001241	MSI2	73	82.231	ENSNGAG00000017807	Msi2	70	82.231	Nannospalax_galili
ENSTBEG00000001241	MSI2	73	77.273	ENSNBRG00000014596	msi2a	81	77.778	Neolamprologus_brichardi
ENSTBEG00000001241	MSI2	62	84.653	ENSNLEG00000008059	MSI2	92	84.653	Nomascus_leucogenys
ENSTBEG00000001241	MSI2	73	82.645	ENSODEG00000011974	MSI2	70	82.645	Octodon_degus
ENSTBEG00000001241	MSI2	57	77.778	ENSONIG00000001972	msi2a	75	77.778	Oreochromis_niloticus
ENSTBEG00000001241	MSI2	67	82.727	ENSOANG00000005667	MSI2	52	82.727	Ornithorhynchus_anatinus
ENSTBEG00000001241	MSI2	67	83.636	ENSOCUG00000010440	MSI2	70	83.636	Oryctolagus_cuniculus
ENSTBEG00000001241	MSI2	73	77.686	ENSORLG00000009671	msi2a	79	77.686	Oryzias_latipes
ENSTBEG00000001241	MSI2	73	77.686	ENSORLG00020021556	msi2a	79	77.686	Oryzias_latipes_hni
ENSTBEG00000001241	MSI2	73	77.686	ENSORLG00015004592	msi2a	79	77.686	Oryzias_latipes_hsok
ENSTBEG00000001241	MSI2	73	77.686	ENSOMEG00000000146	msi2a	79	77.686	Oryzias_melastigma
ENSTBEG00000001241	MSI2	67	82.273	ENSOGAG00000005621	MSI2	72	83.182	Otolemur_garnettii
ENSTBEG00000001241	MSI2	67	83.636	ENSPPAG00000037697	MSI2	90	83.636	Pan_paniscus
ENSTBEG00000001241	MSI2	67	83.636	ENSPPRG00000001848	MSI2	90	83.636	Panthera_pardus
ENSTBEG00000001241	MSI2	73	67.511	ENSPTIG00000021873	-	91	67.511	Panthera_tigris_altaica
ENSTBEG00000001241	MSI2	62	84.653	ENSPTIG00000021678	MSI2	80	84.653	Panthera_tigris_altaica
ENSTBEG00000001241	MSI2	67	83.636	ENSPTRG00000009437	MSI2	90	83.636	Pan_troglodytes
ENSTBEG00000001241	MSI2	73	82.645	ENSPANG00000022319	MSI2	90	83.636	Papio_anubis
ENSTBEG00000001241	MSI2	73	75.207	ENSPKIG00000007038	-	75	75.207	Paramormyrops_kingsleyae
ENSTBEG00000001241	MSI2	73	80.992	ENSPSIG00000008618	MSI2	60	80.992	Pelodiscus_sinensis
ENSTBEG00000001241	MSI2	73	73.529	ENSPMGG00000005888	msi2a	73	73.529	Periophthalmus_magnuspinnatus
ENSTBEG00000001241	MSI2	51	84.071	ENSPEMG00000021793	-	100	84.071	Peromyscus_maniculatus_bairdii
ENSTBEG00000001241	MSI2	73	80.992	ENSPCIG00000006063	MSI2	68	80.992	Phascolarctos_cinereus
ENSTBEG00000001241	MSI2	56	70.476	ENSPFOG00000019337	MSI2	92	70.476	Poecilia_formosa
ENSTBEG00000001241	MSI2	57	77.778	ENSPLAG00000000436	msi2a	72	77.778	Poecilia_latipinna
ENSTBEG00000001241	MSI2	73	77.686	ENSPREG00000000881	msi2a	72	73.950	Poecilia_reticulata
ENSTBEG00000001241	MSI2	51	84.071	ENSPCOG00000019195	-	82	84.071	Propithecus_coquereli
ENSTBEG00000001241	MSI2	54	83.051	ENSPVAG00000017053	MSI2	60	83.051	Pteropus_vampyrus
ENSTBEG00000001241	MSI2	73	77.273	ENSPNYG00000018393	msi2a	79	77.273	Pundamilia_nyererei
ENSTBEG00000001241	MSI2	73	78.099	ENSPNAG00000014957	msi2a	74	78.099	Pygocentrus_nattereri
ENSTBEG00000001241	MSI2	73	80.165	ENSPNAG00000000844	msi2b	72	76.471	Pygocentrus_nattereri
ENSTBEG00000001241	MSI2	59	84.896	ENSRNOG00000025338	Msi2	69	84.896	Rattus_norvegicus
ENSTBEG00000001241	MSI2	51	84.071	ENSRROG00000034421	-	92	84.071	Rhinopithecus_roxellana
ENSTBEG00000001241	MSI2	67	83.636	ENSSBOG00000026425	MSI2	90	83.636	Saimiri_boliviensis_boliviensis
ENSTBEG00000001241	MSI2	67	82.727	ENSSHAG00000008672	MSI2	68	82.727	Sarcophilus_harrisii
ENSTBEG00000001241	MSI2	73	68.880	ENSSFOG00015012168	msi2b	59	68.880	Scleropages_formosus
ENSTBEG00000001241	MSI2	69	75.221	ENSSFOG00015021687	-	76	75.221	Scleropages_formosus
ENSTBEG00000001241	MSI2	73	77.686	ENSSMAG00000018484	msi2a	79	77.686	Scophthalmus_maximus
ENSTBEG00000001241	MSI2	73	77.686	ENSSDUG00000014507	msi2a	82	77.778	Seriola_dumerili
ENSTBEG00000001241	MSI2	73	71.967	ENSSDUG00000021968	-	89	75.556	Seriola_dumerili
ENSTBEG00000001241	MSI2	73	77.686	ENSSLDG00000017172	msi2a	79	77.686	Seriola_lalandi_dorsalis
ENSTBEG00000001241	MSI2	57	79.259	ENSSPUG00000000913	-	80	79.259	Sphenodon_punctatus
ENSTBEG00000001241	MSI2	73	77.686	ENSSPAG00000017793	msi2a	79	77.686	Stegastes_partitus
ENSTBEG00000001241	MSI2	73	82.645	ENSSSCG00000038505	MSI2	79	82.645	Sus_scrofa
ENSTBEG00000001241	MSI2	73	77.686	ENSTRUG00000021248	msi2a	74	73.092	Takifugu_rubripes
ENSTBEG00000001241	MSI2	67	83.636	ENSUAMG00000000700	MSI2	90	83.636	Ursus_americanus
ENSTBEG00000001241	MSI2	59	84.896	ENSUMAG00000000505	MSI2	75	84.896	Ursus_maritimus
ENSTBEG00000001241	MSI2	54	68.362	ENSVPAG00000006837	-	60	68.362	Vicugna_pacos
ENSTBEG00000001241	MSI2	73	82.645	ENSVVUG00000011783	MSI2	70	82.645	Vulpes_vulpes
ENSTBEG00000001241	MSI2	73	76.667	ENSXCOG00000006113	msi2a	62	76.667	Xiphophorus_couchianus
ENSTBEG00000001241	MSI2	73	77.686	ENSXMAG00000000608	msi2a	79	77.686	Xiphophorus_maculatus