EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTBEG00000001507 (Gene tree)
Gene ID: -
Gene Symbol: USB1
Alias: C16orf57|FLJ13154|HVSL1|Mpn1
Full Name: U6 snRNA biogenesis phosphodiesterase 1
Gene Type: protein_coding
Species: Tupaia_belangeri
Status: putative
Strand: Plus strand
Length: 17083 bases
Position: chrGeneScaffold_962:8312-25394
Accession: 25792
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTBEP00000001300	HVSL	PF09749.9	1.1e-37	1	2
ENSTBEP00000001300	HVSL	PF09749.9	1.1e-37	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTBET00000001499	USB1-201	699	-	ENSTBEP00000001300	232 (aa)	-	UPI0000F5F43D

Gene Model

Click here to download ENSTBEG00000001507's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTBEG00000001507's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTBEG00000001507	USB1	100	61.638	ENSG00000103005	USB1	100	59.813	Homo_sapiens
ENSTBEG00000001507	USB1	97	37.054	ENSAPOG00000011942	usb1	80	37.054	Acanthochromis_polyacanthus
ENSTBEG00000001507	USB1	100	58.190	ENSAMEG00000017205	USB1	86	58.190	Ailuropoda_melanoleuca
ENSTBEG00000001507	USB1	98	36.842	ENSACIG00000012234	usb1	84	36.842	Amphilophus_citrinellus
ENSTBEG00000001507	USB1	97	37.946	ENSAOCG00000014831	usb1	79	37.946	Amphiprion_ocellaris
ENSTBEG00000001507	USB1	97	38.393	ENSAPEG00000000296	usb1	79	38.393	Amphiprion_percula
ENSTBEG00000001507	USB1	99	36.364	ENSATEG00000009348	usb1	82	36.364	Anabas_testudineus
ENSTBEG00000001507	USB1	97	48.673	ENSAPLG00000002756	USB1	100	48.673	Anas_platyrhynchos
ENSTBEG00000001507	USB1	97	45.575	ENSACAG00000015481	USB1	99	45.575	Anolis_carolinensis
ENSTBEG00000001507	USB1	100	61.207	ENSANAG00000035640	USB1	88	61.207	Aotus_nancymaae
ENSTBEG00000001507	USB1	97	38.393	ENSACLG00000020586	usb1	79	38.393	Astatotilapia_calliptera
ENSTBEG00000001507	USB1	97	38.222	ENSAMXG00000040146	usb1	75	38.222	Astyanax_mexicanus
ENSTBEG00000001507	USB1	100	59.914	ENSBTAG00000015758	USB1	88	59.914	Bos_taurus
ENSTBEG00000001507	USB1	100	62.931	ENSCJAG00000011733	USB1	88	62.931	Callithrix_jacchus
ENSTBEG00000001507	USB1	99	58.009	ENSCAFG00000008556	USB1	61	58.261	Canis_familiaris
ENSTBEG00000001507	USB1	99	58.009	ENSCAFG00020009263	USB1	87	58.009	Canis_lupus_dingo
ENSTBEG00000001507	USB1	100	58.190	ENSCHIG00000024290	USB1	88	58.190	Capra_hircus
ENSTBEG00000001507	USB1	100	59.483	ENSTSYG00000006997	USB1	88	59.483	Carlito_syrichta
ENSTBEG00000001507	USB1	100	57.328	ENSCAPG00000009057	USB1	100	57.328	Cavia_aperea
ENSTBEG00000001507	USB1	100	57.328	ENSCPOG00000014325	USB1	86	57.328	Cavia_porcellus
ENSTBEG00000001507	USB1	100	62.500	ENSCCAG00000022132	USB1	88	62.500	Cebus_capucinus
ENSTBEG00000001507	USB1	100	61.207	ENSCATG00000032174	USB1	88	61.207	Cercocebus_atys
ENSTBEG00000001507	USB1	63	60.544	ENSCLAG00000007363	USB1	84	60.544	Chinchilla_lanigera
ENSTBEG00000001507	USB1	100	62.069	ENSCSAG00000004783	USB1	88	62.069	Chlorocebus_sabaeus
ENSTBEG00000001507	USB1	97	50.000	ENSCPBG00000026943	USB1	81	50.000	Chrysemys_picta_bellii
ENSTBEG00000001507	USB1	100	62.069	ENSCANG00000037135	USB1	88	62.069	Colobus_angolensis_palliatus
ENSTBEG00000001507	USB1	100	60.345	ENSCGRG00001011243	USB1	87	60.345	Cricetulus_griseus_chok1gshd
ENSTBEG00000001507	USB1	100	60.345	ENSCGRG00000013252	USB1	87	60.345	Cricetulus_griseus_crigri
ENSTBEG00000001507	USB1	97	38.839	ENSCSEG00000013881	usb1	81	38.839	Cynoglossus_semilaevis
ENSTBEG00000001507	USB1	97	34.649	ENSCVAG00000009252	usb1	97	35.088	Cyprinodon_variegatus
ENSTBEG00000001507	USB1	97	37.054	ENSDARG00000003841	usb1	81	37.054	Danio_rerio
ENSTBEG00000001507	USB1	100	58.190	ENSDORG00000001888	Usb1	88	58.190	Dipodomys_ordii
ENSTBEG00000001507	USB1	88	32.683	FBgn0037713	CG16790	78	32.683	Drosophila_melanogaster
ENSTBEG00000001507	USB1	72	78.788	ENSETEG00000019682	USB1	63	78.788	Echinops_telfairi
ENSTBEG00000001507	USB1	96	37.838	ENSEBUG00000005889	usb1	78	37.838	Eptatretus_burgeri
ENSTBEG00000001507	USB1	100	59.914	ENSEASG00005005484	USB1	88	59.914	Equus_asinus_asinus
ENSTBEG00000001507	USB1	100	59.914	ENSECAG00000019493	USB1	80	59.914	Equus_caballus
ENSTBEG00000001507	USB1	63	52.381	ENSEEUG00000000154	USB1	55	52.381	Erinaceus_europaeus
ENSTBEG00000001507	USB1	98	35.808	ENSELUG00000010974	usb1	84	35.808	Esox_lucius
ENSTBEG00000001507	USB1	100	59.914	ENSFCAG00000002693	USB1	87	59.914	Felis_catus
ENSTBEG00000001507	USB1	97	45.982	ENSFALG00000006876	USB1	88	44.915	Ficedula_albicollis
ENSTBEG00000001507	USB1	99	60.173	ENSFDAG00000010052	USB1	87	60.173	Fukomys_damarensis
ENSTBEG00000001507	USB1	82	37.696	ENSFHEG00000012334	usb1	76	38.220	Fundulus_heteroclitus
ENSTBEG00000001507	USB1	96	37.668	ENSGMOG00000004228	usb1	99	37.668	Gadus_morhua
ENSTBEG00000001507	USB1	96	46.429	ENSGALG00000035604	USB1	89	46.460	Gallus_gallus
ENSTBEG00000001507	USB1	97	38.222	ENSGAFG00000021890	usb1	81	38.222	Gambusia_affinis
ENSTBEG00000001507	USB1	97	37.054	ENSGACG00000003257	usb1	81	37.054	Gasterosteus_aculeatus
ENSTBEG00000001507	USB1	97	49.107	ENSGAGG00000022572	USB1	82	49.107	Gopherus_agassizii
ENSTBEG00000001507	USB1	100	61.638	ENSGGOG00000017147	USB1	88	61.638	Gorilla_gorilla
ENSTBEG00000001507	USB1	97	38.839	ENSHBUG00000009823	usb1	80	38.839	Haplochromis_burtoni
ENSTBEG00000001507	USB1	100	60.776	ENSHGLG00000016078	USB1	85	60.776	Heterocephalus_glaber_female
ENSTBEG00000001507	USB1	100	60.776	ENSHGLG00100005562	USB1	85	60.776	Heterocephalus_glaber_male
ENSTBEG00000001507	USB1	93	39.352	ENSHCOG00000015633	usb1	86	39.462	Hippocampus_comes
ENSTBEG00000001507	USB1	97	38.839	ENSIPUG00000008601	usb1	78	38.839	Ictalurus_punctatus
ENSTBEG00000001507	USB1	100	61.638	ENSSTOG00000007548	USB1	85	61.638	Ictidomys_tridecemlineatus
ENSTBEG00000001507	USB1	100	61.207	ENSJJAG00000021859	Usb1	87	61.207	Jaculus_jaculus
ENSTBEG00000001507	USB1	97	37.054	ENSKMAG00000007200	usb1	79	37.054	Kryptolebias_marmoratus
ENSTBEG00000001507	USB1	85	37.374	ENSLBEG00000008452	usb1	64	37.368	Labrus_bergylta
ENSTBEG00000001507	USB1	97	38.158	ENSLACG00000000105	USB1	79	38.158	Latimeria_chalumnae
ENSTBEG00000001507	USB1	99	40.435	ENSLOCG00000000465	usb1	82	40.435	Lepisosteus_oculatus
ENSTBEG00000001507	USB1	100	52.586	ENSLAFG00000002267	USB1	86	52.586	Loxodonta_africana
ENSTBEG00000001507	USB1	100	61.638	ENSMFAG00000003926	USB1	88	61.638	Macaca_fascicularis
ENSTBEG00000001507	USB1	100	61.638	ENSMMUG00000022669	USB1	88	61.638	Macaca_mulatta
ENSTBEG00000001507	USB1	100	61.207	ENSMNEG00000042487	USB1	88	61.207	Macaca_nemestrina
ENSTBEG00000001507	USB1	100	61.638	ENSMLEG00000028756	USB1	88	61.638	Mandrillus_leucophaeus
ENSTBEG00000001507	USB1	97	37.500	ENSMAMG00000015092	usb1	80	37.500	Mastacembelus_armatus
ENSTBEG00000001507	USB1	97	38.393	ENSMZEG00005010008	usb1	80	38.393	Maylandia_zebra
ENSTBEG00000001507	USB1	100	59.914	ENSMAUG00000007832	Usb1	87	59.914	Mesocricetus_auratus
ENSTBEG00000001507	USB1	99	60.606	ENSMICG00000004900	USB1	88	60.776	Microcebus_murinus
ENSTBEG00000001507	USB1	100	59.914	ENSMOCG00000022647	Usb1	87	59.914	Microtus_ochrogaster
ENSTBEG00000001507	USB1	97	36.283	ENSMMOG00000000490	usb1	88	36.283	Mola_mola
ENSTBEG00000001507	USB1	94	49.083	ENSMODG00000014067	USB1	85	48.908	Monodelphis_domestica
ENSTBEG00000001507	USB1	97	35.714	ENSMALG00000005930	usb1	79	35.714	Monopterus_albus
ENSTBEG00000001507	USB1	100	60.776	MGP_CAROLIEiJ_G0031421	Usb1	100	63.717	Mus_caroli
ENSTBEG00000001507	USB1	100	60.776	ENSMUSG00000031792	Usb1	100	64.602	Mus_musculus
ENSTBEG00000001507	USB1	100	61.207	MGP_PahariEiJ_G0023019	Usb1	99	64.655	Mus_pahari
ENSTBEG00000001507	USB1	100	60.345	MGP_SPRETEiJ_G0032540	Usb1	87	60.345	Mus_spretus
ENSTBEG00000001507	USB1	100	56.897	ENSMPUG00000004684	USB1	83	56.897	Mustela_putorius_furo
ENSTBEG00000001507	USB1	99	59.307	ENSMLUG00000007400	USB1	100	59.307	Myotis_lucifugus
ENSTBEG00000001507	USB1	100	61.638	ENSNGAG00000009703	Usb1	86	61.638	Nannospalax_galili
ENSTBEG00000001507	USB1	100	35.897	ENSNBRG00000008747	usb1	99	37.383	Neolamprologus_brichardi
ENSTBEG00000001507	USB1	94	59.447	ENSNLEG00000003340	USB1	87	59.447	Nomascus_leucogenys
ENSTBEG00000001507	USB1	50	48.276	ENSMEUG00000003328	-	71	49.074	Notamacropus_eugenii
ENSTBEG00000001507	USB1	72	79.412	ENSOPRG00000011803	USB1	72	79.412	Ochotona_princeps
ENSTBEG00000001507	USB1	100	58.190	ENSODEG00000016214	USB1	87	58.190	Octodon_degus
ENSTBEG00000001507	USB1	97	38.393	ENSONIG00000011063	usb1	80	38.393	Oreochromis_niloticus
ENSTBEG00000001507	USB1	100	48.927	ENSOANG00000012118	USB1	96	48.927	Ornithorhynchus_anatinus
ENSTBEG00000001507	USB1	97	36.607	ENSORLG00000012479	usb1	82	36.607	Oryzias_latipes
ENSTBEG00000001507	USB1	97	37.054	ENSORLG00020018671	usb1	82	37.054	Oryzias_latipes_hni
ENSTBEG00000001507	USB1	97	36.607	ENSORLG00015009679	usb1	83	36.607	Oryzias_latipes_hsok
ENSTBEG00000001507	USB1	97	36.161	ENSOMEG00000012930	usb1	81	36.161	Oryzias_melastigma
ENSTBEG00000001507	USB1	100	53.448	ENSOGAG00000003273	USB1	87	53.448	Otolemur_garnettii
ENSTBEG00000001507	USB1	100	58.621	ENSOARG00000001107	USB1	89	58.621	Ovis_aries
ENSTBEG00000001507	USB1	100	61.207	ENSPPAG00000042137	USB1	88	61.207	Pan_paniscus
ENSTBEG00000001507	USB1	100	60.345	ENSPPRG00000024797	USB1	87	60.345	Panthera_pardus
ENSTBEG00000001507	USB1	100	59.914	ENSPTIG00000007506	USB1	87	59.914	Panthera_tigris_altaica
ENSTBEG00000001507	USB1	100	54.741	ENSPTRG00000008172	USB1	100	59.813	Pan_troglodytes
ENSTBEG00000001507	USB1	100	61.638	ENSPANG00000025138	USB1	88	61.638	Papio_anubis
ENSTBEG00000001507	USB1	97	39.474	ENSPKIG00000015109	usb1	78	39.224	Paramormyrops_kingsleyae
ENSTBEG00000001507	USB1	97	34.043	ENSPSIG00000004305	USB1	100	34.043	Pelodiscus_sinensis
ENSTBEG00000001507	USB1	96	38.117	ENSPMGG00000017725	usb1	85	38.117	Periophthalmus_magnuspinnatus
ENSTBEG00000001507	USB1	100	62.931	ENSPEMG00000016183	Usb1	85	62.931	Peromyscus_maniculatus_bairdii
ENSTBEG00000001507	USB1	100	38.462	ENSPMAG00000000462	usb1	99	38.462	Petromyzon_marinus
ENSTBEG00000001507	USB1	97	37.778	ENSPFOG00000011130	usb1	81	37.778	Poecilia_formosa
ENSTBEG00000001507	USB1	97	38.222	ENSPLAG00000009820	usb1	81	38.222	Poecilia_latipinna
ENSTBEG00000001507	USB1	97	37.778	ENSPMEG00000006402	usb1	81	37.778	Poecilia_mexicana
ENSTBEG00000001507	USB1	82	36.126	ENSPREG00000001047	usb1	77	37.173	Poecilia_reticulata
ENSTBEG00000001507	USB1	94	56.164	ENSPPYG00000007401	USB1	87	56.164	Pongo_abelii
ENSTBEG00000001507	USB1	100	59.914	ENSPCOG00000022612	USB1	88	59.914	Propithecus_coquereli
ENSTBEG00000001507	USB1	98	59.649	ENSPVAG00000004613	USB1	88	59.649	Pteropus_vampyrus
ENSTBEG00000001507	USB1	97	38.839	ENSPNYG00000022262	usb1	80	38.839	Pundamilia_nyererei
ENSTBEG00000001507	USB1	97	38.393	ENSPNAG00000011736	usb1	76	38.393	Pygocentrus_nattereri
ENSTBEG00000001507	USB1	100	62.500	ENSRNOG00000013216	Usb1	87	62.500	Rattus_norvegicus
ENSTBEG00000001507	USB1	100	55.172	ENSRBIG00000044466	USB1	100	60.280	Rhinopithecus_bieti
ENSTBEG00000001507	USB1	100	62.069	ENSRROG00000029211	USB1	88	62.069	Rhinopithecus_roxellana
ENSTBEG00000001507	USB1	100	62.931	ENSSBOG00000029362	USB1	88	62.931	Saimiri_boliviensis_boliviensis
ENSTBEG00000001507	USB1	94	48.858	ENSSHAG00000006993	USB1	91	48.485	Sarcophilus_harrisii
ENSTBEG00000001507	USB1	94	40.183	ENSSFOG00015023663	usb1	71	39.823	Scleropages_formosus
ENSTBEG00000001507	USB1	97	36.975	ENSSMAG00000015834	usb1	80	36.975	Scophthalmus_maximus
ENSTBEG00000001507	USB1	97	38.393	ENSSDUG00000002949	usb1	83	38.393	Seriola_dumerili
ENSTBEG00000001507	USB1	97	38.393	ENSSLDG00000014174	usb1	80	38.393	Seriola_lalandi_dorsalis
ENSTBEG00000001507	USB1	92	45.794	ENSSPUG00000006741	USB1	100	45.794	Sphenodon_punctatus
ENSTBEG00000001507	USB1	97	36.161	ENSSPAG00000007484	usb1	79	36.161	Stegastes_partitus
ENSTBEG00000001507	USB1	100	61.638	ENSSSCG00000002807	USB1	86	61.638	Sus_scrofa
ENSTBEG00000001507	USB1	91	46.698	ENSTGUG00000004792	USB1	89	45.690	Taeniopygia_guttata
ENSTBEG00000001507	USB1	97	34.821	ENSTRUG00000021069	usb1	83	34.821	Takifugu_rubripes
ENSTBEG00000001507	USB1	100	36.207	ENSTNIG00000000626	usb1	86	36.207	Tetraodon_nigroviridis
ENSTBEG00000001507	USB1	100	57.328	ENSUAMG00000016823	USB1	86	57.328	Ursus_americanus
ENSTBEG00000001507	USB1	92	56.542	ENSUMAG00000021369	USB1	100	56.542	Ursus_maritimus
ENSTBEG00000001507	USB1	99	58.442	ENSVVUG00000023700	USB1	89	58.442	Vulpes_vulpes
ENSTBEG00000001507	USB1	94	40.826	ENSXETG00000013795	usb1	89	40.807	Xenopus_tropicalis
ENSTBEG00000001507	USB1	97	38.222	ENSXMAG00000024687	usb1	66	38.222	Xiphophorus_maculatus