EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTBEG00000001546 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Tupaia_belangeri
Status: putative
Strand: Minus strand
Length: 9174 bases
Position: chrGeneScaffold_1526:538-9711
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTBEP00000001349	RRM_1	PF00076.22	2e-43	1	4
ENSTBEP00000001349	RRM_1	PF00076.22	2e-43	2	4
ENSTBEP00000001349	RRM_1	PF00076.22	2e-43	3	4
ENSTBEP00000001349	RRM_1	PF00076.22	2e-43	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTBET00000001555	-	2133	-	ENSTBEP00000001349	710 (aa)	-	UPI0000F5D590

Gene Model

Click here to download ENSTBEG00000001546's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTBEG00000001546's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTBEG00000001546	-	68	83.784	ENSTBEG00000002469	-	64	83.784

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTBEG00000001546	-	85	80.363	ENSG00000115053	NCL	100	75.676	Homo_sapiens
ENSTBEG00000001546	-	53	84.697	ENSAMEG00000016289	NCL	55	84.697	Ailuropoda_melanoleuca
ENSTBEG00000001546	-	94	63.759	ENSANAG00000024378	-	78	78.906	Aotus_nancymaae
ENSTBEG00000001546	-	85	81.188	ENSANAG00000035814	-	55	84.433	Aotus_nancymaae
ENSTBEG00000001546	-	85	72.131	ENSBTAG00000050728	-	71	83.505	Bos_taurus
ENSTBEG00000001546	-	94	78.592	ENSBTAG00000016174	NCL	57	83.905	Bos_taurus
ENSTBEG00000001546	-	85	73.039	ENSBTAG00000051320	-	69	80.952	Bos_taurus
ENSTBEG00000001546	-	62	82.474	ENSBTAG00000026909	-	75	82.474	Bos_taurus
ENSTBEG00000001546	-	85	80.331	ENSCJAG00000013538	NCL	87	81.488	Callithrix_jacchus
ENSTBEG00000001546	-	85	79.836	ENSCAFG00000011037	NCL	55	84.697	Canis_familiaris
ENSTBEG00000001546	-	84	79.734	ENSCAFG00020023145	NCL	58	84.697	Canis_lupus_dingo
ENSTBEG00000001546	-	75	80.211	ENSCHIG00000021052	-	81	85.088	Capra_hircus
ENSTBEG00000001546	-	85	65.074	ENSCHIG00000012143	-	60	70.976	Capra_hircus
ENSTBEG00000001546	-	85	72.533	ENSCHIG00000026149	-	53	77.045	Capra_hircus
ENSTBEG00000001546	-	85	78.689	ENSCHIG00000010894	-	59	83.641	Capra_hircus
ENSTBEG00000001546	-	85	80.524	ENSTSYG00000004355	-	88	78.396	Carlito_syrichta
ENSTBEG00000001546	-	74	85.633	ENSTSYG00000029779	-	89	85.444	Carlito_syrichta
ENSTBEG00000001546	-	83	67.005	ENSTSYG00000036886	-	68	73.280	Carlito_syrichta
ENSTBEG00000001546	-	85	73.486	ENSCAPG00000009405	NCL	88	72.995	Cavia_aperea
ENSTBEG00000001546	-	85	76.596	ENSCPOG00000001034	NCL	88	76.759	Cavia_porcellus
ENSTBEG00000001546	-	85	80.992	ENSCCAG00000021040	-	56	84.433	Cebus_capucinus
ENSTBEG00000001546	-	85	68.342	ENSCCAG00000000551	-	82	78.351	Cebus_capucinus
ENSTBEG00000001546	-	85	82.401	ENSCATG00000037033	NCL	87	79.572	Cercocebus_atys
ENSTBEG00000001546	-	85	77.451	ENSCLAG00000013080	NCL	88	77.451	Chinchilla_lanigera
ENSTBEG00000001546	-	54	84.211	ENSCSAG00000006660	NCL	95	80.455	Chlorocebus_sabaeus
ENSTBEG00000001546	-	61	66.284	ENSCHOG00000012860	NCL	81	69.577	Choloepus_hoffmanni
ENSTBEG00000001546	-	85	73.443	ENSCGRG00001024315	-	55	76.517	Cricetulus_griseus_chok1gshd
ENSTBEG00000001546	-	86	60.778	ENSCGRG00001022350	-	70	67.105	Cricetulus_griseus_chok1gshd
ENSTBEG00000001546	-	86	61.039	ENSCGRG00000000507	-	56	68.947	Cricetulus_griseus_crigri
ENSTBEG00000001546	-	85	73.659	ENSCGRG00000017894	-	56	76.517	Cricetulus_griseus_crigri
ENSTBEG00000001546	-	85	69.901	ENSDNOG00000046347	-	73	72.868	Dasypus_novemcinctus
ENSTBEG00000001546	-	85	79.051	ENSDNOG00000010783	-	56	81.890	Dasypus_novemcinctus
ENSTBEG00000001546	-	52	63.388	ENSDORG00000023596	-	52	62.534	Dipodomys_ordii
ENSTBEG00000001546	-	85	71.736	ENSDORG00000012513	-	56	73.087	Dipodomys_ordii
ENSTBEG00000001546	-	85	73.355	ENSETEG00000018937	-	76	80.412	Echinops_telfairi
ENSTBEG00000001546	-	53	79.310	ENSETEG00000014756	-	100	77.955	Echinops_telfairi
ENSTBEG00000001546	-	62	53.880	ENSETEG00000008553	-	81	57.368	Echinops_telfairi
ENSTBEG00000001546	-	65	60.000	ENSETEG00000008139	-	78	61.842	Echinops_telfairi
ENSTBEG00000001546	-	85	79.479	ENSEASG00005008488	NCL	61	84.697	Equus_asinus_asinus
ENSTBEG00000001546	-	85	79.479	ENSECAG00000021868	NCL	55	84.697	Equus_caballus
ENSTBEG00000001546	-	85	73.927	ENSEEUG00000005913	NCL	56	78.100	Erinaceus_europaeus
ENSTBEG00000001546	-	85	82.160	ENSFCAG00000027622	NCL	55	84.697	Felis_catus
ENSTBEG00000001546	-	85	79.378	ENSFDAG00000014291	NCL	88	77.414	Fukomys_damarensis
ENSTBEG00000001546	-	85	80.528	ENSGGOG00000004300	NCL	71	91.753	Gorilla_gorilla
ENSTBEG00000001546	-	85	69.983	ENSHGLG00000011069	-	55	75.397	Heterocephalus_glaber_female
ENSTBEG00000001546	-	50	70.455	ENSHGLG00000005133	-	80	65.505	Heterocephalus_glaber_female
ENSTBEG00000001546	-	85	78.325	ENSHGLG00000002031	-	87	77.833	Heterocephalus_glaber_female
ENSTBEG00000001546	-	85	78.161	ENSHGLG00100014537	-	56	82.586	Heterocephalus_glaber_male
ENSTBEG00000001546	-	66	76.531	ENSHGLG00100000745	-	59	74.271	Heterocephalus_glaber_male
ENSTBEG00000001546	-	53	69.657	ENSJJAG00000016165	Ncl	53	69.657	Jaculus_jaculus
ENSTBEG00000001546	-	94	72.714	ENSLAFG00000013061	NCL	81	81.222	Loxodonta_africana
ENSTBEG00000001546	-	85	81.773	ENSMFAG00000040385	NCL	55	84.433	Macaca_fascicularis
ENSTBEG00000001546	-	85	81.773	ENSMMUG00000018094	NCL	65	90.722	Macaca_mulatta
ENSTBEG00000001546	-	62	82.353	ENSMNEG00000023839	NCL	66	90.722	Macaca_nemestrina
ENSTBEG00000001546	-	85	82.566	ENSMLEG00000028935	NCL	87	79.736	Mandrillus_leucophaeus
ENSTBEG00000001546	-	85	65.785	ENSMICG00000029975	-	75	75.000	Microcebus_murinus
ENSTBEG00000001546	-	85	79.276	ENSMICG00000002538	-	87	79.077	Microcebus_murinus
ENSTBEG00000001546	-	85	69.016	MGP_CAROLIEiJ_G0014362	Ncl	55	74.142	Mus_caroli
ENSTBEG00000001546	-	85	69.508	ENSMUSG00000026234	Ncl	55	74.406	Mus_musculus
ENSTBEG00000001546	-	85	68.791	MGP_PahariEiJ_G0027599	Ncl	55	74.406	Mus_pahari
ENSTBEG00000001546	-	85	69.067	MGP_SPRETEiJ_G0015164	Ncl	55	74.406	Mus_spretus
ENSTBEG00000001546	-	85	80.424	ENSMLUG00000014547	NCL	55	84.697	Myotis_lucifugus
ENSTBEG00000001546	-	85	71.935	ENSNGAG00000002454	-	55	77.836	Nannospalax_galili
ENSTBEG00000001546	-	63	81.690	ENSNGAG00000006188	-	63	62.955	Nannospalax_galili
ENSTBEG00000001546	-	78	82.500	ENSNLEG00000014107	-	53	82.500	Nomascus_leucogenys
ENSTBEG00000001546	-	85	70.763	ENSODEG00000002441	-	74	70.763	Octodon_degus
ENSTBEG00000001546	-	85	73.355	ENSODEG00000003281	-	87	73.727	Octodon_degus
ENSTBEG00000001546	-	85	64.547	ENSODEG00000007803	-	86	63.391	Octodon_degus
ENSTBEG00000001546	-	71	79.310	ENSODEG00000002748	-	59	79.365	Octodon_degus
ENSTBEG00000001546	-	85	71.570	ENSOCUG00000004312	NCL	77	82.586	Oryctolagus_cuniculus
ENSTBEG00000001546	-	65	76.253	ENSOGAG00000027852	NCL	62	76.253	Otolemur_garnettii
ENSTBEG00000001546	-	70	85.965	ENSOARG00000013710	-	67	81.530	Ovis_aries
ENSTBEG00000001546	-	82	76.047	ENSOARG00000020709	-	56	82.984	Ovis_aries
ENSTBEG00000001546	-	66	70.207	ENSOARG00000004072	-	61	70.449	Ovis_aries
ENSTBEG00000001546	-	85	80.363	ENSPPAG00000011619	NCL	71	91.753	Pan_paniscus
ENSTBEG00000001546	-	85	81.803	ENSPPRG00000012603	NCL	55	84.433	Panthera_pardus
ENSTBEG00000001546	-	85	81.639	ENSPTIG00000010393	NCL	55	84.433	Panthera_tigris_altaica
ENSTBEG00000001546	-	85	81.475	ENSPTRG00000013025	NCL	71	91.753	Pan_troglodytes
ENSTBEG00000001546	-	85	81.773	ENSPANG00000010292	NCL	55	84.433	Papio_anubis
ENSTBEG00000001546	-	85	73.607	ENSPPYG00000013265	NCL	55	74.674	Pongo_abelii
ENSTBEG00000001546	-	85	80.000	ENSPCOG00000003051	-	87	78.361	Propithecus_coquereli
ENSTBEG00000001546	-	85	74.709	ENSPCOG00000004160	-	80	78.571	Propithecus_coquereli
ENSTBEG00000001546	-	85	80.952	ENSPVAG00000000297	NCL	55	84.960	Pteropus_vampyrus
ENSTBEG00000001546	-	85	70.425	ENSRNOG00000018273	Ncl	55	75.989	Rattus_norvegicus
ENSTBEG00000001546	-	60	81.661	ENSRBIG00000035396	-	79	80.201	Rhinopithecus_bieti
ENSTBEG00000001546	-	94	76.612	ENSRBIG00000037525	-	63	81.591	Rhinopithecus_bieti
ENSTBEG00000001546	-	85	80.460	ENSRROG00000028756	-	86	79.715	Rhinopithecus_roxellana
ENSTBEG00000001546	-	74	83.582	ENSRROG00000036103	-	54	97.241	Rhinopithecus_roxellana
ENSTBEG00000001546	-	62	75.339	ENSSBOG00000027549	-	77	76.253	Saimiri_boliviensis_boliviensis
ENSTBEG00000001546	-	85	78.289	ENSSBOG00000029193	-	55	84.169	Saimiri_boliviensis_boliviensis
ENSTBEG00000001546	-	61	76.471	ENSSBOG00000023094	-	68	77.320	Saimiri_boliviensis_boliviensis
ENSTBEG00000001546	-	94	78.940	ENSSSCG00000016275	NCL	61	82.955	Sus_scrofa
ENSTBEG00000001546	-	85	79.868	ENSTTRG00000009094	NCL	55	82.540	Tursiops_truncatus
ENSTBEG00000001546	-	85	71.523	ENSUAMG00000005639	NCL	78	84.697	Ursus_americanus
ENSTBEG00000001546	-	53	84.697	ENSUMAG00000015789	NCL	55	84.697	Ursus_maritimus
ENSTBEG00000001546	-	62	83.505	ENSVPAG00000001796	NCL	63	83.505	Vicugna_pacos
ENSTBEG00000001546	-	85	77.228	ENSVVUG00000025564	NCL	58	84.169	Vulpes_vulpes