EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTBEG00000001607 (Gene tree)
Gene ID: -
Gene Symbol: RBM47
Alias: FLJ20273|NET18
Full Name: RNA binding motif protein 47
Gene Type: protein_coding
Species: Tupaia_belangeri
Status: putative
Strand: Minus strand
Length: 10512 bases
Position: chrGeneScaffold_4571:78022-88533
Accession: 30358
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTBEP00000001390	RRM_1	PF00076.22	3.1e-31	1	3
ENSTBEP00000001390	RRM_1	PF00076.22	3.1e-31	2	3
ENSTBEP00000001390	RRM_1	PF00076.22	3.1e-31	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTBET00000001602	RBM47-201	1761	-	ENSTBEP00000001390	586 (aa)	-	UPI0000F5E760

Gene Model

Click here to download ENSTBEG00000001607's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTBEG00000001607's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTBEG00000001607	RBM47	51	43.465	ENSTBEG00000002251	-	50	45.963
ENSTBEG00000001607	RBM47	51	69.000	ENSTBEG00000013949	RBM46	56	69.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTBEG00000001607	RBM47	76	90.909	ENSG00000163694	RBM47	100	95.853	Homo_sapiens
ENSTBEG00000001607	RBM47	76	82.133	ENSAPOG00000011062	rbm47	81	83.051	Acanthochromis_polyacanthus
ENSTBEG00000001607	RBM47	76	90.133	ENSAMEG00000009672	RBM47	76	90.933	Ailuropoda_melanoleuca
ENSTBEG00000001607	RBM47	76	82.667	ENSACIG00000011531	rbm47	77	80.749	Amphilophus_citrinellus
ENSTBEG00000001607	RBM47	76	82.133	ENSAOCG00000022245	rbm47	81	83.051	Amphiprion_ocellaris
ENSTBEG00000001607	RBM47	76	82.133	ENSAPEG00000018304	rbm47	81	83.051	Amphiprion_percula
ENSTBEG00000001607	RBM47	76	79.434	ENSATEG00000018400	rbm47	72	83.051	Anabas_testudineus
ENSTBEG00000001607	RBM47	76	86.170	ENSAPLG00000013974	RBM47	76	85.372	Anas_platyrhynchos
ENSTBEG00000001607	RBM47	76	80.902	ENSACAG00000011833	RBM47	77	80.723	Anolis_carolinensis
ENSTBEG00000001607	RBM47	76	91.139	ENSANAG00000029440	RBM47	95	90.642	Aotus_nancymaae
ENSTBEG00000001607	RBM47	76	80.362	ENSACLG00000016902	rbm47	81	83.616	Astatotilapia_calliptera
ENSTBEG00000001607	RBM47	76	78.866	ENSAMXG00000021794	rbm47	72	82.865	Astyanax_mexicanus
ENSTBEG00000001607	RBM47	76	91.139	ENSBTAG00000002356	RBM47	77	91.139	Bos_taurus
ENSTBEG00000001607	RBM47	76	91.139	ENSCJAG00000019385	RBM47	95	90.909	Callithrix_jacchus
ENSTBEG00000001607	RBM47	72	89.518	ENSCAFG00000015898	RBM47	77	89.655	Canis_familiaris
ENSTBEG00000001607	RBM47	60	89.518	ENSCAFG00020010558	RBM47	80	89.655	Canis_lupus_dingo
ENSTBEG00000001607	RBM47	76	92.405	ENSCHIG00000026214	RBM47	77	92.405	Capra_hircus
ENSTBEG00000001607	RBM47	57	84.211	ENSTSYG00000033612	RBM47	66	84.211	Carlito_syrichta
ENSTBEG00000001607	RBM47	76	83.467	ENSCAPG00000008426	RBM47	87	88.750	Cavia_aperea
ENSTBEG00000001607	RBM47	76	91.467	ENSCPOG00000014100	RBM47	87	91.200	Cavia_porcellus
ENSTBEG00000001607	RBM47	76	91.139	ENSCCAG00000030129	-	95	90.374	Cebus_capucinus
ENSTBEG00000001607	RBM47	76	69.863	ENSCCAG00000024397	-	78	71.233	Cebus_capucinus
ENSTBEG00000001607	RBM47	76	91.139	ENSCATG00000042064	RBM47	95	90.909	Cercocebus_atys
ENSTBEG00000001607	RBM47	76	91.733	ENSCLAG00000001684	RBM47	100	95.570	Chinchilla_lanigera
ENSTBEG00000001607	RBM47	76	91.139	ENSCSAG00000017060	RBM47	76	91.139	Chlorocebus_sabaeus
ENSTBEG00000001607	RBM47	71	89.873	ENSCHOG00000011731	RBM47	71	89.873	Choloepus_hoffmanni
ENSTBEG00000001607	RBM47	76	86.170	ENSCPBG00000013831	RBM47	77	85.638	Chrysemys_picta_bellii
ENSTBEG00000001607	RBM47	76	91.139	ENSCANG00000019997	RBM47	95	90.642	Colobus_angolensis_palliatus
ENSTBEG00000001607	RBM47	76	89.333	ENSCGRG00001020102	-	87	89.333	Cricetulus_griseus_chok1gshd
ENSTBEG00000001607	RBM47	76	92.000	ENSCGRG00001000623	-	86	92.000	Cricetulus_griseus_chok1gshd
ENSTBEG00000001607	RBM47	76	92.000	ENSCGRG00000007762	-	100	93.038	Cricetulus_griseus_crigri
ENSTBEG00000001607	RBM47	76	89.333	ENSCGRG00000014760	-	87	89.333	Cricetulus_griseus_crigri
ENSTBEG00000001607	RBM47	76	80.371	ENSCSEG00000004545	rbm47	77	78.989	Cynoglossus_semilaevis
ENSTBEG00000001607	RBM47	76	80.267	ENSCVAG00000020144	rbm47	81	83.286	Cyprinodon_variegatus
ENSTBEG00000001607	RBM47	76	79.124	ENSDARG00000061985	rbm47	73	82.817	Danio_rerio
ENSTBEG00000001607	RBM47	76	88.564	ENSDNOG00000046854	RBM47	77	89.628	Dasypus_novemcinctus
ENSTBEG00000001607	RBM47	76	88.608	ENSDORG00000010144	Rbm47	77	88.608	Dipodomys_ordii
ENSTBEG00000001607	RBM47	76	91.250	ENSETEG00000009194	RBM47	77	90.000	Echinops_telfairi
ENSTBEG00000001607	RBM47	63	68.267	ENSEBUG00000011912	rbm47	65	72.254	Eptatretus_burgeri
ENSTBEG00000001607	RBM47	76	92.405	ENSEASG00005008443	RBM47	77	92.405	Equus_asinus_asinus
ENSTBEG00000001607	RBM47	76	92.405	ENSECAG00000004400	RBM47	77	92.405	Equus_caballus
ENSTBEG00000001607	RBM47	52	93.939	ENSEEUG00000001194	RBM47	52	94.805	Erinaceus_europaeus
ENSTBEG00000001607	RBM47	76	78.734	ENSELUG00000006148	rbm47	81	83.754	Esox_lucius
ENSTBEG00000001607	RBM47	76	92.405	ENSFCAG00000012399	RBM47	77	92.405	Felis_catus
ENSTBEG00000001607	RBM47	76	85.638	ENSFALG00000002861	RBM47	77	84.840	Ficedula_albicollis
ENSTBEG00000001607	RBM47	76	88.267	ENSFDAG00000016326	RBM47	87	87.733	Fukomys_damarensis
ENSTBEG00000001607	RBM47	76	80.800	ENSFHEG00000007938	rbm47	77	79.679	Fundulus_heteroclitus
ENSTBEG00000001607	RBM47	76	78.934	ENSGMOG00000014802	rbm47	71	83.662	Gadus_morhua
ENSTBEG00000001607	RBM47	63	85.638	ENSGALG00000014267	RBM47	99	85.638	Gallus_gallus
ENSTBEG00000001607	RBM47	62	81.793	ENSGAFG00000020571	rbm47	98	79.679	Gambusia_affinis
ENSTBEG00000001607	RBM47	76	76.923	ENSGACG00000016223	rbm47	81	81.073	Gasterosteus_aculeatus
ENSTBEG00000001607	RBM47	76	86.170	ENSGAGG00000020051	RBM47	77	85.638	Gopherus_agassizii
ENSTBEG00000001607	RBM47	76	91.139	ENSGGOG00000001367	RBM47	95	90.909	Gorilla_gorilla
ENSTBEG00000001607	RBM47	76	80.362	ENSHBUG00000003520	rbm47	81	83.616	Haplochromis_burtoni
ENSTBEG00000001607	RBM47	76	84.615	ENSHGLG00000016914	RBM47	100	93.671	Heterocephalus_glaber_female
ENSTBEG00000001607	RBM47	76	83.733	ENSHGLG00100003071	-	77	83.200	Heterocephalus_glaber_male
ENSTBEG00000001607	RBM47	76	88.800	ENSHGLG00100014028	-	100	93.671	Heterocephalus_glaber_male
ENSTBEG00000001607	RBM47	76	81.915	ENSHCOG00000002074	rbm47	81	84.746	Hippocampus_comes
ENSTBEG00000001607	RBM47	76	79.947	ENSIPUG00000004743	rbm47	78	82.203	Ictalurus_punctatus
ENSTBEG00000001607	RBM47	76	89.867	ENSSTOG00000004727	RBM47	100	94.937	Ictidomys_tridecemlineatus
ENSTBEG00000001607	RBM47	76	94.805	ENSJJAG00000013823	Rbm47	76	94.805	Jaculus_jaculus
ENSTBEG00000001607	RBM47	76	81.746	ENSKMAG00000000084	rbm47	81	82.817	Kryptolebias_marmoratus
ENSTBEG00000001607	RBM47	76	79.947	ENSLBEG00000008436	rbm47	80	81.921	Labrus_bergylta
ENSTBEG00000001607	RBM47	76	83.690	ENSLACG00000007196	RBM47	77	83.690	Latimeria_chalumnae
ENSTBEG00000001607	RBM47	76	83.422	ENSLOCG00000012966	rbm47	74	83.422	Lepisosteus_oculatus
ENSTBEG00000001607	RBM47	76	91.250	ENSLAFG00000011998	RBM47	78	90.000	Loxodonta_africana
ENSTBEG00000001607	RBM47	76	91.139	ENSMFAG00000037967	RBM47	95	90.909	Macaca_fascicularis
ENSTBEG00000001607	RBM47	76	91.139	ENSMMUG00000012036	RBM47	100	95.337	Macaca_mulatta
ENSTBEG00000001607	RBM47	76	91.139	ENSMNEG00000040774	RBM47	95	90.642	Macaca_nemestrina
ENSTBEG00000001607	RBM47	76	91.139	ENSMLEG00000041432	RBM47	97	90.476	Mandrillus_leucophaeus
ENSTBEG00000001607	RBM47	76	80.412	ENSMAMG00000019143	rbm47	82	83.616	Mastacembelus_armatus
ENSTBEG00000001607	RBM47	76	80.362	ENSMZEG00005023659	rbm47	80	83.616	Maylandia_zebra
ENSTBEG00000001607	RBM47	76	85.372	ENSMGAG00000012226	RBM47	77	84.574	Meleagris_gallopavo
ENSTBEG00000001607	RBM47	76	94.737	ENSMAUG00000006493	Rbm47	100	93.038	Mesocricetus_auratus
ENSTBEG00000001607	RBM47	76	91.139	ENSMICG00000026417	RBM47	88	91.139	Microcebus_murinus
ENSTBEG00000001607	RBM47	76	94.737	ENSMOCG00000021170	Rbm47	100	93.671	Microtus_ochrogaster
ENSTBEG00000001607	RBM47	76	79.587	ENSMMOG00000007260	rbm47	72	83.333	Mola_mola
ENSTBEG00000001607	RBM47	53	75.710	ENSMODG00000015426	-	97	77.170	Monodelphis_domestica
ENSTBEG00000001607	RBM47	76	81.016	ENSMODG00000020561	-	74	81.921	Monodelphis_domestica
ENSTBEG00000001607	RBM47	76	86.133	ENSMODG00000007003	RBM47	77	85.867	Monodelphis_domestica
ENSTBEG00000001607	RBM47	76	79.733	ENSMALG00000005167	rbm47	82	83.051	Monopterus_albus
ENSTBEG00000001607	RBM47	76	94.737	MGP_CAROLIEiJ_G0027258	Rbm47	100	93.038	Mus_caroli
ENSTBEG00000001607	RBM47	76	94.737	ENSMUSG00000070780	Rbm47	100	93.038	Mus_musculus
ENSTBEG00000001607	RBM47	76	94.737	MGP_PahariEiJ_G0017040	Rbm47	100	93.671	Mus_pahari
ENSTBEG00000001607	RBM47	76	94.737	MGP_SPRETEiJ_G0028253	Rbm47	100	93.038	Mus_spretus
ENSTBEG00000001607	RBM47	76	93.506	ENSMPUG00000006177	RBM47	72	93.506	Mustela_putorius_furo
ENSTBEG00000001607	RBM47	76	91.026	ENSMLUG00000000889	RBM47	77	91.026	Myotis_lucifugus
ENSTBEG00000001607	RBM47	76	94.805	ENSNGAG00000003325	Rbm47	76	94.805	Nannospalax_galili
ENSTBEG00000001607	RBM47	76	80.620	ENSNBRG00000015092	rbm47	72	83.898	Neolamprologus_brichardi
ENSTBEG00000001607	RBM47	76	90.909	ENSNLEG00000017151	RBM47	95	90.909	Nomascus_leucogenys
ENSTBEG00000001607	RBM47	61	86.944	ENSMEUG00000009516	-	83	87.887	Notamacropus_eugenii
ENSTBEG00000001607	RBM47	63	92.105	ENSOPRG00000016507	-	64	92.105	Ochotona_princeps
ENSTBEG00000001607	RBM47	76	90.933	ENSODEG00000004873	RBM47	77	90.933	Octodon_degus
ENSTBEG00000001607	RBM47	76	79.231	ENSONIG00000009061	rbm47	72	83.333	Oreochromis_niloticus
ENSTBEG00000001607	RBM47	76	85.000	ENSOANG00000008978	RBM47	78	86.250	Ornithorhynchus_anatinus
ENSTBEG00000001607	RBM47	76	90.426	ENSOCUG00000012034	RBM47	77	89.873	Oryctolagus_cuniculus
ENSTBEG00000001607	RBM47	76	82.181	ENSORLG00000005847	rbm47	82	82.535	Oryzias_latipes
ENSTBEG00000001607	RBM47	76	82.181	ENSORLG00020005154	rbm47	82	82.535	Oryzias_latipes_hni
ENSTBEG00000001607	RBM47	76	82.447	ENSORLG00015000066	rbm47	82	82.817	Oryzias_latipes_hsok
ENSTBEG00000001607	RBM47	76	82.400	ENSOMEG00000010730	rbm47	77	80.214	Oryzias_melastigma
ENSTBEG00000001607	RBM47	76	84.416	ENSOGAG00000025193	-	77	84.416	Otolemur_garnettii
ENSTBEG00000001607	RBM47	76	93.506	ENSOGAG00000029367	-	76	93.506	Otolemur_garnettii
ENSTBEG00000001607	RBM47	76	92.105	ENSOARG00000012711	RBM47	75	93.421	Ovis_aries
ENSTBEG00000001607	RBM47	76	90.909	ENSPPAG00000029763	RBM47	95	90.909	Pan_paniscus
ENSTBEG00000001607	RBM47	76	92.405	ENSPPRG00000012873	RBM47	90	92.405	Panthera_pardus
ENSTBEG00000001607	RBM47	61	89.474	ENSPTIG00000017046	RBM47	75	90.210	Panthera_tigris_altaica
ENSTBEG00000001607	RBM47	76	91.139	ENSPTRG00000016006	RBM47	95	90.909	Pan_troglodytes
ENSTBEG00000001607	RBM47	76	91.139	ENSPANG00000005980	RBM47	95	90.909	Papio_anubis
ENSTBEG00000001607	RBM47	73	84.136	ENSPKIG00000013431	RBM47	80	84.136	Paramormyrops_kingsleyae
ENSTBEG00000001607	RBM47	73	83.569	ENSPKIG00000005037	rbm47	73	83.569	Paramormyrops_kingsleyae
ENSTBEG00000001607	RBM47	63	86.170	ENSPSIG00000017516	RBM47	69	85.638	Pelodiscus_sinensis
ENSTBEG00000001607	RBM47	76	81.551	ENSPMGG00000018540	rbm47	77	80.749	Periophthalmus_magnuspinnatus
ENSTBEG00000001607	RBM47	76	94.737	ENSPEMG00000011088	Rbm47	86	94.737	Peromyscus_maniculatus_bairdii
ENSTBEG00000001607	RBM47	73	84.463	ENSPFOG00000007997	rbm47	71	83.003	Poecilia_formosa
ENSTBEG00000001607	RBM47	73	84.181	ENSPLAG00000002072	rbm47	87	79.412	Poecilia_latipinna
ENSTBEG00000001607	RBM47	76	81.067	ENSPMEG00000017492	rbm47	80	83.003	Poecilia_mexicana
ENSTBEG00000001607	RBM47	73	84.463	ENSPREG00000008456	rbm47	87	79.679	Poecilia_reticulata
ENSTBEG00000001607	RBM47	74	80.328	ENSPPYG00000014688	RBM47	60	81.232	Pongo_abelii
ENSTBEG00000001607	RBM47	76	90.133	ENSPCAG00000011879	RBM47	77	90.400	Procavia_capensis
ENSTBEG00000001607	RBM47	76	90.909	ENSPCOG00000023451	RBM47	87	90.909	Propithecus_coquereli
ENSTBEG00000001607	RBM47	76	88.608	ENSPVAG00000003812	RBM47	77	89.390	Pteropus_vampyrus
ENSTBEG00000001607	RBM47	76	80.362	ENSPNYG00000022868	rbm47	71	83.616	Pundamilia_nyererei
ENSTBEG00000001607	RBM47	76	79.381	ENSPNAG00000007940	rbm47	73	83.989	Pygocentrus_nattereri
ENSTBEG00000001607	RBM47	76	93.421	ENSRNOG00000002408	Rbm47	77	93.421	Rattus_norvegicus
ENSTBEG00000001607	RBM47	76	91.139	ENSRBIG00000039601	RBM47	95	90.642	Rhinopithecus_bieti
ENSTBEG00000001607	RBM47	76	91.139	ENSRROG00000044696	RBM47	95	90.642	Rhinopithecus_roxellana
ENSTBEG00000001607	RBM47	76	90.642	ENSSBOG00000028475	RBM47	96	90.642	Saimiri_boliviensis_boliviensis
ENSTBEG00000001607	RBM47	76	86.400	ENSSHAG00000017576	RBM47	77	86.133	Sarcophilus_harrisii
ENSTBEG00000001607	RBM47	76	77.807	ENSSFOG00015024101	RBM47	74	81.073	Scleropages_formosus
ENSTBEG00000001607	RBM47	76	79.328	ENSSFOG00015012445	rbm47	72	83.944	Scleropages_formosus
ENSTBEG00000001607	RBM47	76	78.663	ENSSMAG00000009744	rbm47	82	81.356	Scophthalmus_maximus
ENSTBEG00000001607	RBM47	76	81.867	ENSSDUG00000022684	rbm47	77	80.749	Seriola_dumerili
ENSTBEG00000001607	RBM47	76	82.133	ENSSLDG00000003109	rbm47	80	83.569	Seriola_lalandi_dorsalis
ENSTBEG00000001607	RBM47	72	87.335	ENSSARG00000001735	RBM47	73	88.391	Sorex_araneus
ENSTBEG00000001607	RBM47	76	83.957	ENSSPUG00000007515	RBM47	88	83.957	Sphenodon_punctatus
ENSTBEG00000001607	RBM47	76	83.200	ENSSPAG00000001257	rbm47	81	84.181	Stegastes_partitus
ENSTBEG00000001607	RBM47	76	92.405	ENSSSCG00000008796	RBM47	77	92.405	Sus_scrofa
ENSTBEG00000001607	RBM47	76	85.638	ENSTGUG00000008705	RBM47	77	84.840	Taeniopygia_guttata
ENSTBEG00000001607	RBM47	75	81.370	ENSTRUG00000014050	rbm47	78	80.214	Takifugu_rubripes
ENSTBEG00000001607	RBM47	76	79.328	ENSTNIG00000006127	rbm47	72	83.898	Tetraodon_nigroviridis
ENSTBEG00000001607	RBM47	76	90.909	ENSTTRG00000002839	RBM47	77	90.909	Tursiops_truncatus
ENSTBEG00000001607	RBM47	76	93.421	ENSUAMG00000021346	RBM47	76	93.421	Ursus_americanus
ENSTBEG00000001607	RBM47	72	90.368	ENSVVUG00000014774	RBM47	77	89.920	Vulpes_vulpes
ENSTBEG00000001607	RBM47	76	82.895	ENSXETG00000012802	rbm47	92	81.217	Xenopus_tropicalis
ENSTBEG00000001607	RBM47	74	81.793	ENSXCOG00000000780	rbm47	87	79.679	Xiphophorus_couchianus
ENSTBEG00000001607	RBM47	73	84.181	ENSXMAG00000009874	rbm47	81	83.003	Xiphophorus_maculatus