EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTBEG00000001732 (Gene tree)
Gene ID: -
Gene Symbol: PRDM4
Alias: PFM1
Full Name: PR/SET domain 4
Gene Type: protein_coding
Species: Tupaia_belangeri
Status: putative
Strand: Minus strand
Length: 43367 bases
Position: chrGeneScaffold_1326:6034-49400
Accession: 9348
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTBEP00000001514	zf-C2H2	PF00096.26	4.5e-17	1	2
ENSTBEP00000001514	zf-C2H2	PF00096.26	4.5e-17	2	2
ENSTBEP00000001514	zf-met	PF12874.7	4.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTBET00000001742	PRDM4-201	2091	-	ENSTBEP00000001514	697 (aa)	-	UPI0000F5DB0D

Gene Model

Click here to download ENSTBEG00000001732's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTBEG00000001732's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTBEG00000001732	PRDM4	84	89.761	ENSG00000110851	PRDM4	100	79.570	Homo_sapiens
ENSTBEG00000001732	PRDM4	84	89.949	ENSAMEG00000016174	PRDM4	73	89.949	Ailuropoda_melanoleuca
ENSTBEG00000001732	PRDM4	84	80.375	ENSAPLG00000009846	PRDM4	73	80.375	Anas_platyrhynchos
ENSTBEG00000001732	PRDM4	84	89.761	ENSANAG00000024800	PRDM4	73	89.761	Aotus_nancymaae
ENSTBEG00000001732	PRDM4	84	89.761	ENSBTAG00000012999	PRDM4	73	89.761	Bos_taurus
ENSTBEG00000001732	PRDM4	84	100.000	ENSCJAG00000015261	PRDM4	77	100.000	Callithrix_jacchus
ENSTBEG00000001732	PRDM4	84	89.932	ENSCAFG00000001788	PRDM4	73	89.932	Canis_familiaris
ENSTBEG00000001732	PRDM4	84	89.932	ENSCAFG00020004916	PRDM4	73	89.932	Canis_lupus_dingo
ENSTBEG00000001732	PRDM4	84	89.761	ENSCHIG00000019409	PRDM4	73	89.761	Capra_hircus
ENSTBEG00000001732	PRDM4	84	89.590	ENSTSYG00000009248	PRDM4	73	89.590	Carlito_syrichta
ENSTBEG00000001732	PRDM4	84	83.788	ENSCAPG00000013937	PRDM4	73	83.788	Cavia_aperea
ENSTBEG00000001732	PRDM4	84	83.108	ENSCPOG00000022385	PRDM4	80	79.112	Cavia_porcellus
ENSTBEG00000001732	PRDM4	84	89.932	ENSCCAG00000036033	PRDM4	73	89.932	Cebus_capucinus
ENSTBEG00000001732	PRDM4	84	89.761	ENSCATG00000044797	PRDM4	73	89.761	Cercocebus_atys
ENSTBEG00000001732	PRDM4	84	84.992	ENSCLAG00000007545	PRDM4	74	85.497	Chinchilla_lanigera
ENSTBEG00000001732	PRDM4	84	89.932	ENSCSAG00000002896	PRDM4	73	89.932	Chlorocebus_sabaeus
ENSTBEG00000001732	PRDM4	84	81.911	ENSCPBG00000023187	PRDM4	74	81.911	Chrysemys_picta_bellii
ENSTBEG00000001732	PRDM4	84	89.761	ENSCANG00000021804	PRDM4	73	89.761	Colobus_angolensis_palliatus
ENSTBEG00000001732	PRDM4	84	86.509	ENSCGRG00001015102	-	74	86.509	Cricetulus_griseus_chok1gshd
ENSTBEG00000001732	PRDM4	84	86.509	ENSCGRG00000004044	-	77	86.509	Cricetulus_griseus_crigri
ENSTBEG00000001732	PRDM4	84	89.078	ENSDNOG00000032478	PRDM4	84	89.078	Dasypus_novemcinctus
ENSTBEG00000001732	PRDM4	74	96.569	ENSDORG00000015081	-	74	96.098	Dipodomys_ordii
ENSTBEG00000001732	PRDM4	84	39.635	ENSEBUG00000003775	prdm4	83	39.635	Eptatretus_burgeri
ENSTBEG00000001732	PRDM4	84	90.614	ENSECAG00000015423	PRDM4	80	90.614	Equus_caballus
ENSTBEG00000001732	PRDM4	84	86.860	ENSEEUG00000006569	PRDM4	78	86.860	Erinaceus_europaeus
ENSTBEG00000001732	PRDM4	84	53.808	ENSELUG00000015265	prdm4	80	54.139	Esox_lucius
ENSTBEG00000001732	PRDM4	84	90.273	ENSFCAG00000022478	PRDM4	73	90.273	Felis_catus
ENSTBEG00000001732	PRDM4	84	80.546	ENSFALG00000013342	PRDM4	74	80.546	Ficedula_albicollis
ENSTBEG00000001732	PRDM4	84	80.612	ENSGALG00000012619	PRDM4	73	80.612	Gallus_gallus
ENSTBEG00000001732	PRDM4	84	81.399	ENSGAGG00000002763	PRDM4	70	81.399	Gopherus_agassizii
ENSTBEG00000001732	PRDM4	84	89.590	ENSGGOG00000001244	PRDM4	73	89.590	Gorilla_gorilla
ENSTBEG00000001732	PRDM4	84	88.225	ENSHGLG00000004590	PRDM4	72	88.225	Heterocephalus_glaber_female
ENSTBEG00000001732	PRDM4	84	86.869	ENSHGLG00100007464	PRDM4	74	86.869	Heterocephalus_glaber_male
ENSTBEG00000001732	PRDM4	84	51.759	ENSIPUG00000024162	prdm4	80	51.759	Ictalurus_punctatus
ENSTBEG00000001732	PRDM4	84	90.273	ENSSTOG00000016168	PRDM4	73	90.273	Ictidomys_tridecemlineatus
ENSTBEG00000001732	PRDM4	61	98.137	ENSJJAG00000022448	-	60	98.137	Jaculus_jaculus
ENSTBEG00000001732	PRDM4	84	65.878	ENSLACG00000007452	PRDM4	81	66.216	Latimeria_chalumnae
ENSTBEG00000001732	PRDM4	67	48.768	ENSLOCG00000017092	prdm4	68	48.768	Lepisosteus_oculatus
ENSTBEG00000001732	PRDM4	84	89.545	ENSLAFG00000001483	PRDM4	75	89.545	Loxodonta_africana
ENSTBEG00000001732	PRDM4	84	90.102	ENSMFAG00000041862	PRDM4	73	90.102	Macaca_fascicularis
ENSTBEG00000001732	PRDM4	84	90.102	ENSMMUG00000015550	PRDM4	73	90.102	Macaca_mulatta
ENSTBEG00000001732	PRDM4	84	89.761	ENSMNEG00000032319	PRDM4	73	89.761	Macaca_nemestrina
ENSTBEG00000001732	PRDM4	84	89.932	ENSMLEG00000039607	PRDM4	73	89.932	Mandrillus_leucophaeus
ENSTBEG00000001732	PRDM4	84	70.458	ENSMGAG00000012815	PRDM4	74	70.458	Meleagris_gallopavo
ENSTBEG00000001732	PRDM4	84	88.737	ENSMICG00000007807	PRDM4	84	88.737	Microcebus_murinus
ENSTBEG00000001732	PRDM4	84	87.884	ENSMOCG00000000753	Prdm4	73	87.884	Microtus_ochrogaster
ENSTBEG00000001732	PRDM4	84	88.225	ENSMUSG00000035529	Prdm4	74	88.225	Mus_musculus
ENSTBEG00000001732	PRDM4	84	87.372	MGP_PahariEiJ_G0031398	Prdm4	74	87.372	Mus_pahari
ENSTBEG00000001732	PRDM4	84	88.737	MGP_SPRETEiJ_G0016505	Prdm4	74	88.737	Mus_spretus
ENSTBEG00000001732	PRDM4	84	89.949	ENSMPUG00000012238	PRDM4	73	89.949	Mustela_putorius_furo
ENSTBEG00000001732	PRDM4	84	89.761	ENSMLUG00000000767	PRDM4	73	89.761	Myotis_lucifugus
ENSTBEG00000001732	PRDM4	84	89.078	ENSNGAG00000018627	Prdm4	74	89.078	Nannospalax_galili
ENSTBEG00000001732	PRDM4	84	89.761	ENSNLEG00000006748	PRDM4	73	89.761	Nomascus_leucogenys
ENSTBEG00000001732	PRDM4	72	82.418	ENSMEUG00000004495	PRDM4	70	82.418	Notamacropus_eugenii
ENSTBEG00000001732	PRDM4	71	97.414	ENSOPRG00000010192	PRDM4	62	97.414	Ochotona_princeps
ENSTBEG00000001732	PRDM4	84	82.765	ENSODEG00000014750	PRDM4	73	83.276	Octodon_degus
ENSTBEG00000001732	PRDM4	84	83.276	ENSOANG00000005526	PRDM4	74	83.276	Ornithorhynchus_anatinus
ENSTBEG00000001732	PRDM4	84	89.590	ENSOCUG00000012859	PRDM4	81	89.590	Oryctolagus_cuniculus
ENSTBEG00000001732	PRDM4	84	90.102	ENSOGAG00000011945	PRDM4	73	90.102	Otolemur_garnettii
ENSTBEG00000001732	PRDM4	84	89.249	ENSOARG00000017955	PRDM4	73	89.249	Ovis_aries
ENSTBEG00000001732	PRDM4	84	89.761	ENSPPAG00000038438	PRDM4	73	89.761	Pan_paniscus
ENSTBEG00000001732	PRDM4	84	90.273	ENSPPRG00000004144	PRDM4	73	90.273	Panthera_pardus
ENSTBEG00000001732	PRDM4	84	90.273	ENSPTIG00000005847	PRDM4	73	90.273	Panthera_tigris_altaica
ENSTBEG00000001732	PRDM4	84	89.932	ENSPTRG00000005400	PRDM4	73	89.932	Pan_troglodytes
ENSTBEG00000001732	PRDM4	84	90.102	ENSPANG00000022084	PRDM4	73	90.102	Papio_anubis
ENSTBEG00000001732	PRDM4	84	52.989	ENSPKIG00000000875	prdm4	81	53.312	Paramormyrops_kingsleyae
ENSTBEG00000001732	PRDM4	74	71.801	ENSPSIG00000012066	PRDM4	67	71.801	Pelodiscus_sinensis
ENSTBEG00000001732	PRDM4	84	88.908	ENSPEMG00000014598	Prdm4	74	88.908	Peromyscus_maniculatus_bairdii
ENSTBEG00000001732	PRDM4	84	82.453	ENSPCIG00000009471	PRDM4	88	82.453	Phascolarctos_cinereus
ENSTBEG00000001732	PRDM4	84	89.590	ENSPPYG00000004913	PRDM4	73	89.590	Pongo_abelii
ENSTBEG00000001732	PRDM4	74	88.521	ENSPCAG00000009987	PRDM4	64	88.521	Procavia_capensis
ENSTBEG00000001732	PRDM4	84	88.567	ENSPCOG00000021060	PRDM4	80	88.567	Propithecus_coquereli
ENSTBEG00000001732	PRDM4	84	89.420	ENSPVAG00000001596	PRDM4	73	89.420	Pteropus_vampyrus
ENSTBEG00000001732	PRDM4	84	89.078	ENSRNOG00000004962	Prdm4	73	89.078	Rattus_norvegicus
ENSTBEG00000001732	PRDM4	84	89.761	ENSRBIG00000035488	PRDM4	73	89.761	Rhinopithecus_bieti
ENSTBEG00000001732	PRDM4	84	89.932	ENSRROG00000012779	PRDM4	73	89.932	Rhinopithecus_roxellana
ENSTBEG00000001732	PRDM4	84	100.000	ENSSBOG00000000403	PRDM4	77	100.000	Saimiri_boliviensis_boliviensis
ENSTBEG00000001732	PRDM4	84	56.146	ENSSFOG00015023358	prdm4	81	56.146	Scleropages_formosus
ENSTBEG00000001732	PRDM4	84	89.932	ENSSSCG00000000160	PRDM4	67	98.707	Sus_scrofa
ENSTBEG00000001732	PRDM4	84	81.058	ENSTGUG00000010962	-	73	81.058	Taeniopygia_guttata
ENSTBEG00000001732	PRDM4	84	90.102	ENSTTRG00000011056	PRDM4	73	90.102	Tursiops_truncatus
ENSTBEG00000001732	PRDM4	84	89.932	ENSUAMG00000022796	PRDM4	73	89.932	Ursus_americanus
ENSTBEG00000001732	PRDM4	84	89.932	ENSUMAG00000017231	PRDM4	73	89.932	Ursus_maritimus
ENSTBEG00000001732	PRDM4	84	90.444	ENSVPAG00000002215	PRDM4	74	90.444	Vicugna_pacos
ENSTBEG00000001732	PRDM4	84	89.932	ENSVVUG00000023397	PRDM4	73	89.932	Vulpes_vulpes