EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTBEG00000001756 (Gene tree)
Gene ID: -
Gene Symbol: CPSF1
Alias: CPSF160
Full Name: cleavage and polyadenylation specific factor 1
Gene Type: protein_coding
Species: Tupaia_belangeri
Status: putative
Strand: Minus strand
Length: 15318 bases
Position: chrGeneScaffold_432:3-15320
Accession: 2324
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTBEP00000001577	CPSF_A	PF03178.15	3.9e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTBET00000001820	CPSF1-201	3555	-	ENSTBEP00000001577	1185 (aa)	-	UPI0000F5D650

Gene Model

Click here to download ENSTBEG00000001756's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTBEG00000001756's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTBEG00000001756	CPSF1	91	88.812	ENSG00000071894	CPSF1	77	88.812	Homo_sapiens
ENSTBEG00000001756	CPSF1	90	74.250	ENSAPOG00000019621	cpsf1	77	74.603	Acanthochromis_polyacanthus
ENSTBEG00000001756	CPSF1	90	93.866	ENSAMEG00000005557	CPSF1	78	93.866	Ailuropoda_melanoleuca
ENSTBEG00000001756	CPSF1	91	74.784	ENSACIG00000006112	cpsf1	77	74.957	Amphilophus_citrinellus
ENSTBEG00000001756	CPSF1	91	73.801	ENSAOCG00000007120	cpsf1	77	74.315	Amphiprion_ocellaris
ENSTBEG00000001756	CPSF1	91	73.801	ENSAPEG00000005755	cpsf1	77	74.403	Amphiprion_percula
ENSTBEG00000001756	CPSF1	89	74.549	ENSATEG00000011097	cpsf1	77	73.438	Anabas_testudineus
ENSTBEG00000001756	CPSF1	83	79.452	ENSACAG00000009655	CPSF1	76	79.795	Anolis_carolinensis
ENSTBEG00000001756	CPSF1	91	89.310	ENSANAG00000036514	CPSF1	77	89.310	Aotus_nancymaae
ENSTBEG00000001756	CPSF1	91	75.618	ENSACLG00000012231	cpsf1	76	75.972	Astatotilapia_calliptera
ENSTBEG00000001756	CPSF1	91	67.938	ENSAMXG00000008485	cpsf1	76	67.938	Astyanax_mexicanus
ENSTBEG00000001756	CPSF1	88	94.653	ENSBTAG00000008355	CPSF1	75	94.653	Bos_taurus
ENSTBEG00000001756	CPSF1	73	42.222	WBGene00022301	cpsf-1	59	42.222	Caenorhabditis_elegans
ENSTBEG00000001756	CPSF1	91	89.138	ENSCJAG00000021421	CPSF1	80	89.138	Callithrix_jacchus
ENSTBEG00000001756	CPSF1	90	93.633	ENSCAFG00000001600	CPSF1	76	93.633	Canis_familiaris
ENSTBEG00000001756	CPSF1	91	88.508	ENSCAFG00020020821	CPSF1	77	88.508	Canis_lupus_dingo
ENSTBEG00000001756	CPSF1	91	89.391	ENSCHIG00000015833	CPSF1	79	89.391	Capra_hircus
ENSTBEG00000001756	CPSF1	91	89.310	ENSTSYG00000028560	CPSF1	77	89.310	Carlito_syrichta
ENSTBEG00000001756	CPSF1	91	91.128	ENSCAPG00000014921	CPSF1	76	91.128	Cavia_aperea
ENSTBEG00000001756	CPSF1	91	85.714	ENSCPOG00000011448	CPSF1	77	85.714	Cavia_porcellus
ENSTBEG00000001756	CPSF1	91	89.138	ENSCCAG00000037658	CPSF1	77	89.138	Cebus_capucinus
ENSTBEG00000001756	CPSF1	91	89.138	ENSCATG00000037234	CPSF1	80	89.138	Cercocebus_atys
ENSTBEG00000001756	CPSF1	91	89.828	ENSCLAG00000012166	CPSF1	77	89.828	Chinchilla_lanigera
ENSTBEG00000001756	CPSF1	91	89.138	ENSCSAG00000008502	CPSF1	77	89.138	Chlorocebus_sabaeus
ENSTBEG00000001756	CPSF1	91	80.895	ENSCPBG00000018910	CPSF1	75	81.067	Chrysemys_picta_bellii
ENSTBEG00000001756	CPSF1	91	49.741	ENSCING00000000514	-	80	49.741	Ciona_intestinalis
ENSTBEG00000001756	CPSF1	91	49.228	ENSCSAVG00000002293	-	77	49.228	Ciona_savignyi
ENSTBEG00000001756	CPSF1	90	93.832	ENSCANG00000032760	CPSF1	75	93.832	Colobus_angolensis_palliatus
ENSTBEG00000001756	CPSF1	91	88.448	ENSCGRG00001016344	Cpsf1	77	88.448	Cricetulus_griseus_chok1gshd
ENSTBEG00000001756	CPSF1	91	88.448	ENSCGRG00000003118	Cpsf1	78	88.448	Cricetulus_griseus_crigri
ENSTBEG00000001756	CPSF1	91	71.107	ENSCSEG00000013464	cpsf1	76	74.806	Cynoglossus_semilaevis
ENSTBEG00000001756	CPSF1	76	72.101	ENSCVAG00000014059	cpsf1	65	73.818	Cyprinodon_variegatus
ENSTBEG00000001756	CPSF1	91	73.935	ENSDARG00000034178	cpsf1	77	74.276	Danio_rerio
ENSTBEG00000001756	CPSF1	62	90.041	ENSDNOG00000043654	CPSF1	89	81.449	Dasypus_novemcinctus
ENSTBEG00000001756	CPSF1	90	94.382	ENSDORG00000006278	Cpsf1	76	93.866	Dipodomys_ordii
ENSTBEG00000001756	CPSF1	91	45.172	FBgn0024698	Cpsf160	77	45.008	Drosophila_melanogaster
ENSTBEG00000001756	CPSF1	74	84.589	ENSETEG00000006022	CPSF1	65	84.589	Echinops_telfairi
ENSTBEG00000001756	CPSF1	89	94.518	ENSEASG00005010774	CPSF1	77	89.365	Equus_asinus_asinus
ENSTBEG00000001756	CPSF1	89	94.707	ENSECAG00000022209	CPSF1	77	89.365	Equus_caballus
ENSTBEG00000001756	CPSF1	91	87.650	ENSEEUG00000000471	CPSF1	77	87.650	Erinaceus_europaeus
ENSTBEG00000001756	CPSF1	91	73.057	ENSELUG00000012271	cpsf1	77	76.604	Esox_lucius
ENSTBEG00000001756	CPSF1	91	89.310	ENSFDAG00000016060	CPSF1	77	89.310	Fukomys_damarensis
ENSTBEG00000001756	CPSF1	91	73.368	ENSFHEG00000016801	cpsf1	77	73.368	Fundulus_heteroclitus
ENSTBEG00000001756	CPSF1	91	71.918	ENSGMOG00000000796	cpsf1	77	72.945	Gadus_morhua
ENSTBEG00000001756	CPSF1	91	72.586	ENSGAFG00000018890	cpsf1	82	73.276	Gambusia_affinis
ENSTBEG00000001756	CPSF1	91	74.787	ENSGACG00000008703	cpsf1	77	74.576	Gasterosteus_aculeatus
ENSTBEG00000001756	CPSF1	88	85.771	ENSGAGG00000004276	CPSF1	86	85.771	Gopherus_agassizii
ENSTBEG00000001756	CPSF1	91	89.483	ENSGGOG00000016185	CPSF1	77	89.483	Gorilla_gorilla
ENSTBEG00000001756	CPSF1	91	74.266	ENSHBUG00000018900	cpsf1	77	74.611	Haplochromis_burtoni
ENSTBEG00000001756	CPSF1	91	89.138	ENSHGLG00000016139	CPSF1	77	89.138	Heterocephalus_glaber_female
ENSTBEG00000001756	CPSF1	87	97.345	ENSHGLG00100009750	CPSF1	74	97.345	Heterocephalus_glaber_male
ENSTBEG00000001756	CPSF1	91	70.132	ENSHCOG00000018509	cpsf1	78	70.462	Hippocampus_comes
ENSTBEG00000001756	CPSF1	91	71.743	ENSIPUG00000011259	cpsf1	77	72.250	Ictalurus_punctatus
ENSTBEG00000001756	CPSF1	90	93.519	ENSSTOG00000009957	CPSF1	76	93.519	Ictidomys_tridecemlineatus
ENSTBEG00000001756	CPSF1	91	88.448	ENSJJAG00000023002	Cpsf1	77	88.448	Jaculus_jaculus
ENSTBEG00000001756	CPSF1	76	86.316	ENSKMAG00000001940	cpsf1	73	86.316	Kryptolebias_marmoratus
ENSTBEG00000001756	CPSF1	91	70.812	ENSLBEG00000003601	cpsf1	78	71.195	Labrus_bergylta
ENSTBEG00000001756	CPSF1	79	70.037	ENSLACG00000000233	CPSF1	70	70.037	Latimeria_chalumnae
ENSTBEG00000001756	CPSF1	91	69.517	ENSLOCG00000008484	cpsf1	77	70.818	Lepisosteus_oculatus
ENSTBEG00000001756	CPSF1	90	92.193	ENSLAFG00000022601	CPSF1	77	92.193	Loxodonta_africana
ENSTBEG00000001756	CPSF1	91	88.966	ENSMFAG00000037013	CPSF1	77	88.966	Macaca_fascicularis
ENSTBEG00000001756	CPSF1	91	89.138	ENSMMUG00000007380	CPSF1	77	89.138	Macaca_mulatta
ENSTBEG00000001756	CPSF1	90	94.206	ENSMNEG00000043564	CPSF1	77	94.206	Macaca_nemestrina
ENSTBEG00000001756	CPSF1	91	88.966	ENSMLEG00000043010	CPSF1	80	88.966	Mandrillus_leucophaeus
ENSTBEG00000001756	CPSF1	89	75.725	ENSMAMG00000003803	cpsf1	77	74.870	Mastacembelus_armatus
ENSTBEG00000001756	CPSF1	91	75.618	ENSMZEG00005001168	cpsf1	76	75.972	Maylandia_zebra
ENSTBEG00000001756	CPSF1	91	88.468	ENSMAUG00000003601	Cpsf1	77	88.468	Mesocricetus_auratus
ENSTBEG00000001756	CPSF1	91	89.655	ENSMICG00000015767	CPSF1	77	89.655	Microcebus_murinus
ENSTBEG00000001756	CPSF1	91	88.621	ENSMOCG00000022758	Cpsf1	77	88.621	Microtus_ochrogaster
ENSTBEG00000001756	CPSF1	91	74.048	ENSMMOG00000021245	cpsf1	77	74.567	Mola_mola
ENSTBEG00000001756	CPSF1	91	84.524	ENSMODG00000010755	CPSF1	77	84.524	Monodelphis_domestica
ENSTBEG00000001756	CPSF1	91	70.588	ENSMALG00000020545	cpsf1	78	71.405	Monopterus_albus
ENSTBEG00000001756	CPSF1	91	88.966	MGP_CAROLIEiJ_G0019936	Cpsf1	77	88.966	Mus_caroli
ENSTBEG00000001756	CPSF1	91	88.966	ENSMUSG00000034022	Cpsf1	77	88.966	Mus_musculus
ENSTBEG00000001756	CPSF1	91	88.793	MGP_PahariEiJ_G0019946	Cpsf1	77	88.793	Mus_pahari
ENSTBEG00000001756	CPSF1	91	88.966	MGP_SPRETEiJ_G0020839	Cpsf1	77	88.966	Mus_spretus
ENSTBEG00000001756	CPSF1	88	92.277	ENSMPUG00000006419	CPSF1	72	92.277	Mustela_putorius_furo
ENSTBEG00000001756	CPSF1	91	88.276	ENSNGAG00000022460	Cpsf1	77	88.276	Nannospalax_galili
ENSTBEG00000001756	CPSF1	80	87.611	ENSNBRG00000000813	cpsf1	69	87.611	Neolamprologus_brichardi
ENSTBEG00000001756	CPSF1	74	78.313	ENSNLEG00000010633	-	73	78.313	Nomascus_leucogenys
ENSTBEG00000001756	CPSF1	72	98.551	ENSMEUG00000014922	CPSF1	62	98.551	Notamacropus_eugenii
ENSTBEG00000001756	CPSF1	56	96.429	ENSOPRG00000004693	-	54	96.429	Ochotona_princeps
ENSTBEG00000001756	CPSF1	91	89.483	ENSODEG00000013995	CPSF1	77	89.483	Octodon_degus
ENSTBEG00000001756	CPSF1	91	74.957	ENSONIG00000007676	cpsf1	77	75.648	Oreochromis_niloticus
ENSTBEG00000001756	CPSF1	50	86.131	ENSOANG00000010716	CPSF1	63	86.829	Ornithorhynchus_anatinus
ENSTBEG00000001756	CPSF1	91	70.443	ENSORLG00000013544	cpsf1	65	85.882	Oryzias_latipes
ENSTBEG00000001756	CPSF1	91	71.240	ENSORLG00020021693	cpsf1	65	85.882	Oryzias_latipes_hni
ENSTBEG00000001756	CPSF1	91	70.608	ENSORLG00015009979	cpsf1	78	71.405	Oryzias_latipes_hsok
ENSTBEG00000001756	CPSF1	91	70.647	ENSOMEG00000011849	cpsf1	78	71.144	Oryzias_melastigma
ENSTBEG00000001756	CPSF1	91	88.966	ENSOGAG00000000315	CPSF1	77	88.966	Otolemur_garnettii
ENSTBEG00000001756	CPSF1	91	89.310	ENSPPAG00000019280	CPSF1	77	89.310	Pan_paniscus
ENSTBEG00000001756	CPSF1	91	89.310	ENSPTRG00000049288	-	77	89.310	Pan_troglodytes
ENSTBEG00000001756	CPSF1	91	89.310	ENSPTRG00000051253	-	77	88.793	Pan_troglodytes
ENSTBEG00000001756	CPSF1	90	93.832	ENSPANG00000015005	CPSF1	77	93.832	Papio_anubis
ENSTBEG00000001756	CPSF1	87	86.283	ENSPKIG00000002582	cpsf1	72	86.283	Paramormyrops_kingsleyae
ENSTBEG00000001756	CPSF1	91	84.354	ENSPCIG00000009035	CPSF1	77	84.354	Phascolarctos_cinereus
ENSTBEG00000001756	CPSF1	91	69.281	ENSPFOG00000012870	cpsf1	78	69.444	Poecilia_formosa
ENSTBEG00000001756	CPSF1	91	69.168	ENSPREG00000016307	cpsf1	78	69.331	Poecilia_reticulata
ENSTBEG00000001756	CPSF1	84	93.774	ENSPPYG00000018973	CPSF1	72	93.774	Pongo_abelii
ENSTBEG00000001756	CPSF1	83	95.312	ENSPCAG00000011541	CPSF1	71	95.312	Procavia_capensis
ENSTBEG00000001756	CPSF1	91	89.119	ENSPCOG00000020001	CPSF1	78	89.119	Propithecus_coquereli
ENSTBEG00000001756	CPSF1	79	97.037	ENSPVAG00000006761	CPSF1	68	97.037	Pteropus_vampyrus
ENSTBEG00000001756	CPSF1	89	75.492	ENSPNYG00000004906	cpsf1	76	75.492	Pundamilia_nyererei
ENSTBEG00000001756	CPSF1	91	70.578	ENSPNAG00000024395	cpsf1	77	70.578	Pygocentrus_nattereri
ENSTBEG00000001756	CPSF1	91	88.793	ENSRNOG00000030705	Cpsf1	77	88.793	Rattus_norvegicus
ENSTBEG00000001756	CPSF1	91	89.138	ENSRBIG00000044907	CPSF1	79	89.138	Rhinopithecus_bieti
ENSTBEG00000001756	CPSF1	91	89.138	ENSRROG00000044861	CPSF1	79	89.138	Rhinopithecus_roxellana
ENSTBEG00000001756	CPSF1	90	93.832	ENSSBOG00000027177	CPSF1	77	93.832	Saimiri_boliviensis_boliviensis
ENSTBEG00000001756	CPSF1	91	84.354	ENSSHAG00000006500	CPSF1	77	84.354	Sarcophilus_harrisii
ENSTBEG00000001756	CPSF1	88	79.216	ENSSFOG00015004606	cpsf1	76	79.216	Scleropages_formosus
ENSTBEG00000001756	CPSF1	91	70.213	ENSSMAG00000020547	cpsf1	78	71.195	Scophthalmus_maximus
ENSTBEG00000001756	CPSF1	91	74.913	ENSSDUG00000001100	cpsf1	77	74.913	Seriola_dumerili
ENSTBEG00000001756	CPSF1	91	74.739	ENSSLDG00000003619	cpsf1	77	74.739	Seriola_lalandi_dorsalis
ENSTBEG00000001756	CPSF1	81	86.085	ENSSARG00000003643	CPSF1	68	86.085	Sorex_araneus
ENSTBEG00000001756	CPSF1	89	84.470	ENSSPUG00000014396	CPSF1	77	85.038	Sphenodon_punctatus
ENSTBEG00000001756	CPSF1	91	70.799	ENSSPAG00000005349	cpsf1	78	70.962	Stegastes_partitus
ENSTBEG00000001756	CPSF1	91	86.621	ENSSSCG00000005906	CPSF1	77	86.621	Sus_scrofa
ENSTBEG00000001756	CPSF1	89	75.088	ENSTRUG00000013134	cpsf1	77	75.088	Takifugu_rubripes
ENSTBEG00000001756	CPSF1	91	73.288	ENSTNIG00000014027	cpsf1	77	73.288	Tetraodon_nigroviridis
ENSTBEG00000001756	CPSF1	79	84.848	ENSTTRG00000001937	CPSF1	67	84.848	Tursiops_truncatus
ENSTBEG00000001756	CPSF1	91	92.532	ENSUAMG00000006476	CPSF1	76	92.532	Ursus_americanus
ENSTBEG00000001756	CPSF1	91	72.569	ENSXCOG00000003608	cpsf1	77	73.090	Xiphophorus_couchianus
ENSTBEG00000001756	CPSF1	91	71.626	ENSXMAG00000005798	cpsf1	77	72.318	Xiphophorus_maculatus