EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTBEG00000002254 (Gene tree)
Gene ID: -
Gene Symbol: POLR1C
Alias: RPA39|RPA40|RPA5|RPAC1
Full Name: RNA polymerase I and III subunit C
Gene Type: protein_coding
Species: Tupaia_belangeri
Status: putative
Strand: Plus strand
Length: 971 bases
Position: chrGeneScaffold_4417:37875-38845
Accession: 20194
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTBEP00000001937	RNA_pol_A_bac	PF01000.26	3.7e-13	1	1
ENSTBEP00000001937	RNA_pol_L	PF01193.24	7.5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTBET00000002237	POLR1C-201	537	-	ENSTBEP00000001937	178 (aa)	-	UPI0000F5E91D

Gene Model

Click here to download ENSTBEG00000002254's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTBEG00000002254's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTBEG00000002254	POLR1C	100	98.876	ENSG00000171453	POLR1C	61	98.876	Homo_sapiens
ENSTBEG00000002254	POLR1C	100	74.157	ENSAPOG00000024356	polr1c	51	74.157	Acanthochromis_polyacanthus
ENSTBEG00000002254	POLR1C	100	97.753	ENSAMEG00000012205	POLR1C	51	97.753	Ailuropoda_melanoleuca
ENSTBEG00000002254	POLR1C	98	74.286	ENSACIG00000016268	polr1c	54	74.286	Amphilophus_citrinellus
ENSTBEG00000002254	POLR1C	100	71.348	ENSAPEG00000002433	polr1c	51	71.348	Amphiprion_percula
ENSTBEG00000002254	POLR1C	99	74.432	ENSATEG00000005985	polr1c	50	74.432	Anabas_testudineus
ENSTBEG00000002254	POLR1C	100	82.022	ENSAPLG00000002908	POLR1C	59	82.022	Anas_platyrhynchos
ENSTBEG00000002254	POLR1C	100	98.315	ENSANAG00000025805	POLR1C	51	98.315	Aotus_nancymaae
ENSTBEG00000002254	POLR1C	100	70.787	ENSACLG00000006573	polr1c	51	70.787	Astatotilapia_calliptera
ENSTBEG00000002254	POLR1C	100	69.101	ENSAMXG00000012062	polr1c	51	69.101	Astyanax_mexicanus
ENSTBEG00000002254	POLR1C	100	97.753	ENSBTAG00000018969	POLR1C	51	97.753	Bos_taurus
ENSTBEG00000002254	POLR1C	100	97.753	ENSCJAG00000005594	POLR1C	51	97.753	Callithrix_jacchus
ENSTBEG00000002254	POLR1C	100	98.315	ENSCAFG00000001872	POLR1C	51	98.315	Canis_familiaris
ENSTBEG00000002254	POLR1C	100	98.315	ENSCAFG00020012018	POLR1C	51	98.315	Canis_lupus_dingo
ENSTBEG00000002254	POLR1C	100	98.315	ENSCHIG00000004352	POLR1C	51	98.315	Capra_hircus
ENSTBEG00000002254	POLR1C	100	98.315	ENSTSYG00000011921	POLR1C	51	98.315	Carlito_syrichta
ENSTBEG00000002254	POLR1C	100	96.629	ENSCAPG00000015364	POLR1C	52	96.629	Cavia_aperea
ENSTBEG00000002254	POLR1C	100	97.191	ENSCPOG00000038098	POLR1C	51	97.191	Cavia_porcellus
ENSTBEG00000002254	POLR1C	100	98.315	ENSCCAG00000020169	POLR1C	51	98.315	Cebus_capucinus
ENSTBEG00000002254	POLR1C	100	98.315	ENSCATG00000044045	POLR1C	51	98.315	Cercocebus_atys
ENSTBEG00000002254	POLR1C	100	97.753	ENSCLAG00000009266	POLR1C	51	97.753	Chinchilla_lanigera
ENSTBEG00000002254	POLR1C	100	97.191	ENSCSAG00000011913	POLR1C	51	97.191	Chlorocebus_sabaeus
ENSTBEG00000002254	POLR1C	100	96.629	ENSCHOG00000006601	POLR1C	84	96.629	Choloepus_hoffmanni
ENSTBEG00000002254	POLR1C	100	83.146	ENSCPBG00000025203	POLR1C	51	83.146	Chrysemys_picta_bellii
ENSTBEG00000002254	POLR1C	100	54.190	ENSCING00000003563	-	51	54.190	Ciona_intestinalis
ENSTBEG00000002254	POLR1C	100	97.191	ENSCANG00000043167	POLR1C	51	97.191	Colobus_angolensis_palliatus
ENSTBEG00000002254	POLR1C	100	95.506	ENSCGRG00001017533	Polr1c	51	95.506	Cricetulus_griseus_chok1gshd
ENSTBEG00000002254	POLR1C	100	95.506	ENSCGRG00000013225	Polr1c	60	95.506	Cricetulus_griseus_crigri
ENSTBEG00000002254	POLR1C	100	72.472	ENSCSEG00000018097	polr1c	51	72.472	Cynoglossus_semilaevis
ENSTBEG00000002254	POLR1C	100	71.910	ENSCVAG00000005684	polr1c	71	71.910	Cyprinodon_variegatus
ENSTBEG00000002254	POLR1C	100	97.753	ENSDNOG00000042693	POLR1C	51	97.753	Dasypus_novemcinctus
ENSTBEG00000002254	POLR1C	100	97.191	ENSDORG00000000429	Polr1c	51	97.191	Dipodomys_ordii
ENSTBEG00000002254	POLR1C	98	55.747	FBgn0031657	CG3756	51	55.747	Drosophila_melanogaster
ENSTBEG00000002254	POLR1C	100	90.449	ENSETEG00000010807	POLR1C	51	90.449	Echinops_telfairi
ENSTBEG00000002254	POLR1C	98	72.989	ENSEBUG00000013725	polr1c	56	72.989	Eptatretus_burgeri
ENSTBEG00000002254	POLR1C	100	97.753	ENSEASG00005003338	POLR1C	51	97.753	Equus_asinus_asinus
ENSTBEG00000002254	POLR1C	100	97.753	ENSECAG00000023516	POLR1C	51	97.753	Equus_caballus
ENSTBEG00000002254	POLR1C	100	98.315	ENSEEUG00000005471	POLR1C	51	98.315	Erinaceus_europaeus
ENSTBEG00000002254	POLR1C	100	71.348	ENSELUG00000013027	polr1c	51	71.348	Esox_lucius
ENSTBEG00000002254	POLR1C	100	97.753	ENSFCAG00000009735	POLR1C	51	97.753	Felis_catus
ENSTBEG00000002254	POLR1C	100	82.022	ENSFALG00000012111	POLR1C	55	82.022	Ficedula_albicollis
ENSTBEG00000002254	POLR1C	100	94.944	ENSFDAG00000008428	POLR1C	51	94.944	Fukomys_damarensis
ENSTBEG00000002254	POLR1C	100	68.715	ENSGMOG00000013878	polr1c	55	68.715	Gadus_morhua
ENSTBEG00000002254	POLR1C	100	82.022	ENSGALG00000010349	POLR1C	58	82.022	Gallus_gallus
ENSTBEG00000002254	POLR1C	100	70.787	ENSGAFG00000010153	polr1c	51	70.787	Gambusia_affinis
ENSTBEG00000002254	POLR1C	100	72.472	ENSGACG00000002453	polr1c	51	72.472	Gasterosteus_aculeatus
ENSTBEG00000002254	POLR1C	100	83.708	ENSGAGG00000010640	POLR1C	55	83.708	Gopherus_agassizii
ENSTBEG00000002254	POLR1C	100	98.876	ENSGGOG00000010903	POLR1C	51	98.876	Gorilla_gorilla
ENSTBEG00000002254	POLR1C	100	70.787	ENSHBUG00000017816	polr1c	54	70.787	Haplochromis_burtoni
ENSTBEG00000002254	POLR1C	100	94.382	ENSHGLG00000019441	POLR1C	68	94.382	Heterocephalus_glaber_female
ENSTBEG00000002254	POLR1C	100	93.820	ENSHGLG00100005970	POLR1C	68	93.820	Heterocephalus_glaber_male
ENSTBEG00000002254	POLR1C	98	71.264	ENSHCOG00000002179	polr1c	50	71.264	Hippocampus_comes
ENSTBEG00000002254	POLR1C	99	70.455	ENSIPUG00000024464	polr1c	51	70.455	Ictalurus_punctatus
ENSTBEG00000002254	POLR1C	100	98.315	ENSSTOG00000010631	POLR1C	51	98.315	Ictidomys_tridecemlineatus
ENSTBEG00000002254	POLR1C	100	94.944	ENSJJAG00000023110	Polr1c	51	94.944	Jaculus_jaculus
ENSTBEG00000002254	POLR1C	100	70.787	ENSLBEG00000014925	polr1c	51	70.787	Labrus_bergylta
ENSTBEG00000002254	POLR1C	100	62.011	ENSLACG00000012567	POLR1C	52	62.011	Latimeria_chalumnae
ENSTBEG00000002254	POLR1C	100	98.315	ENSLAFG00000026248	POLR1C	59	98.315	Loxodonta_africana
ENSTBEG00000002254	POLR1C	100	98.315	ENSMFAG00000046295	POLR1C	51	98.315	Macaca_fascicularis
ENSTBEG00000002254	POLR1C	100	98.315	ENSMMUG00000015192	POLR1C	51	98.315	Macaca_mulatta
ENSTBEG00000002254	POLR1C	100	98.315	ENSMNEG00000028073	POLR1C	51	98.315	Macaca_nemestrina
ENSTBEG00000002254	POLR1C	100	98.315	ENSMLEG00000034818	POLR1C	51	98.315	Mandrillus_leucophaeus
ENSTBEG00000002254	POLR1C	100	70.787	ENSMAMG00000008700	polr1c	51	70.787	Mastacembelus_armatus
ENSTBEG00000002254	POLR1C	100	70.787	ENSMZEG00005018545	polr1c	51	70.787	Maylandia_zebra
ENSTBEG00000002254	POLR1C	100	81.461	ENSMGAG00000011020	POLR1C	62	81.461	Meleagris_gallopavo
ENSTBEG00000002254	POLR1C	100	96.067	ENSMAUG00000014329	Polr1c	51	96.067	Mesocricetus_auratus
ENSTBEG00000002254	POLR1C	100	95.506	ENSMICG00000005027	POLR1C	51	95.506	Microcebus_murinus
ENSTBEG00000002254	POLR1C	100	95.506	ENSMOCG00000017549	Polr1c	51	95.506	Microtus_ochrogaster
ENSTBEG00000002254	POLR1C	100	89.888	ENSMODG00000018964	POLR1C	61	89.888	Monodelphis_domestica
ENSTBEG00000002254	POLR1C	100	94.944	MGP_CAROLIEiJ_G0021662	Polr1c	68	94.944	Mus_caroli
ENSTBEG00000002254	POLR1C	100	93.820	ENSMUSG00000067148	Polr1c	68	93.820	Mus_musculus
ENSTBEG00000002254	POLR1C	100	93.258	MGP_PahariEiJ_G0020654	Polr1c	68	93.258	Mus_pahari
ENSTBEG00000002254	POLR1C	100	94.382	MGP_SPRETEiJ_G0022574	Polr1c	68	94.382	Mus_spretus
ENSTBEG00000002254	POLR1C	100	99.438	ENSMLUG00000017751	POLR1C	51	99.438	Myotis_lucifugus
ENSTBEG00000002254	POLR1C	100	95.506	ENSNGAG00000023487	Polr1c	61	95.506	Nannospalax_galili
ENSTBEG00000002254	POLR1C	100	71.348	ENSNBRG00000018742	polr1c	51	71.348	Neolamprologus_brichardi
ENSTBEG00000002254	POLR1C	100	98.876	ENSNLEG00000004035	POLR1C	51	98.876	Nomascus_leucogenys
ENSTBEG00000002254	POLR1C	100	64.607	ENSMEUG00000006778	POLR1C	51	64.607	Notamacropus_eugenii
ENSTBEG00000002254	POLR1C	100	94.382	ENSODEG00000015831	-	51	94.382	Octodon_degus
ENSTBEG00000002254	POLR1C	100	93.258	ENSODEG00000017109	-	81	93.258	Octodon_degus
ENSTBEG00000002254	POLR1C	100	71.348	ENSONIG00000013133	polr1c	50	71.348	Oreochromis_niloticus
ENSTBEG00000002254	POLR1C	100	85.393	ENSOANG00000003043	POLR1C	51	85.393	Ornithorhynchus_anatinus
ENSTBEG00000002254	POLR1C	100	97.191	ENSOCUG00000005504	POLR1C	51	97.191	Oryctolagus_cuniculus
ENSTBEG00000002254	POLR1C	98	69.540	ENSORLG00000019743	polr1c	51	69.540	Oryzias_latipes
ENSTBEG00000002254	POLR1C	98	69.540	ENSORLG00020006489	POLR1C	52	69.540	Oryzias_latipes_hni
ENSTBEG00000002254	POLR1C	98	68.966	ENSORLG00015013322	polr1c	50	68.966	Oryzias_latipes_hsok
ENSTBEG00000002254	POLR1C	100	93.258	ENSOGAG00000016318	POLR1C	51	93.258	Otolemur_garnettii
ENSTBEG00000002254	POLR1C	100	98.315	ENSOARG00000007503	POLR1C	51	98.315	Ovis_aries
ENSTBEG00000002254	POLR1C	100	98.876	ENSPPAG00000043678	POLR1C	51	98.876	Pan_paniscus
ENSTBEG00000002254	POLR1C	100	97.753	ENSPPRG00000009760	POLR1C	51	97.753	Panthera_pardus
ENSTBEG00000002254	POLR1C	100	97.753	ENSPTIG00000014813	POLR1C	51	97.753	Panthera_tigris_altaica
ENSTBEG00000002254	POLR1C	100	98.876	ENSPTRG00000018202	POLR1C	51	98.876	Pan_troglodytes
ENSTBEG00000002254	POLR1C	100	98.315	ENSPANG00000009025	POLR1C	51	98.315	Papio_anubis
ENSTBEG00000002254	POLR1C	100	74.157	ENSPKIG00000009858	polr1c	51	74.157	Paramormyrops_kingsleyae
ENSTBEG00000002254	POLR1C	100	96.067	ENSPEMG00000006970	Polr1c	51	96.067	Peromyscus_maniculatus_bairdii
ENSTBEG00000002254	POLR1C	100	67.956	ENSPMAG00000005560	polr1c	52	67.956	Petromyzon_marinus
ENSTBEG00000002254	POLR1C	100	89.888	ENSPCIG00000028137	POLR1C	51	89.888	Phascolarctos_cinereus
ENSTBEG00000002254	POLR1C	100	71.910	ENSPFOG00000014357	polr1c	50	71.910	Poecilia_formosa
ENSTBEG00000002254	POLR1C	100	71.910	ENSPFOG00000014342	POLR1C	51	71.910	Poecilia_formosa
ENSTBEG00000002254	POLR1C	100	71.910	ENSPLAG00000004111	polr1c	74	71.910	Poecilia_latipinna
ENSTBEG00000002254	POLR1C	100	71.910	ENSPMEG00000011877	-	51	71.910	Poecilia_mexicana
ENSTBEG00000002254	POLR1C	100	71.910	ENSPMEG00000008420	polr1c	51	71.910	Poecilia_mexicana
ENSTBEG00000002254	POLR1C	100	71.910	ENSPREG00000007985	polr1c	51	71.910	Poecilia_reticulata
ENSTBEG00000002254	POLR1C	100	98.315	ENSPPYG00000016645	POLR1C	52	98.315	Pongo_abelii
ENSTBEG00000002254	POLR1C	100	96.067	ENSPCOG00000024628	POLR1C	51	96.067	Propithecus_coquereli
ENSTBEG00000002254	POLR1C	100	98.876	ENSPVAG00000005689	POLR1C	51	98.876	Pteropus_vampyrus
ENSTBEG00000002254	POLR1C	100	70.787	ENSPNYG00000003620	polr1c	51	70.787	Pundamilia_nyererei
ENSTBEG00000002254	POLR1C	100	69.101	ENSPNAG00000008443	polr1c	55	69.101	Pygocentrus_nattereri
ENSTBEG00000002254	POLR1C	100	93.820	ENSRNOG00000019079	Polr1c	68	93.820	Rattus_norvegicus
ENSTBEG00000002254	POLR1C	100	97.191	ENSRBIG00000007155	POLR1C	51	97.191	Rhinopithecus_bieti
ENSTBEG00000002254	POLR1C	100	97.753	ENSRROG00000000257	POLR1C	51	97.753	Rhinopithecus_roxellana
ENSTBEG00000002254	POLR1C	100	90.449	ENSSHAG00000014456	POLR1C	53	90.449	Sarcophilus_harrisii
ENSTBEG00000002254	POLR1C	100	72.472	ENSSFOG00015019860	polr1c	51	72.472	Scleropages_formosus
ENSTBEG00000002254	POLR1C	100	71.910	ENSSMAG00000018865	polr1c	52	71.910	Scophthalmus_maximus
ENSTBEG00000002254	POLR1C	99	80.114	ENSSPUG00000011822	POLR1C	51	80.114	Sphenodon_punctatus
ENSTBEG00000002254	POLR1C	100	73.034	ENSSPAG00000022369	polr1c	51	73.034	Stegastes_partitus
ENSTBEG00000002254	POLR1C	100	97.191	ENSSSCG00000028007	POLR1C	57	97.191	Sus_scrofa
ENSTBEG00000002254	POLR1C	100	82.584	ENSTGUG00000009159	POLR1C	53	82.584	Taeniopygia_guttata
ENSTBEG00000002254	POLR1C	99	70.621	ENSTRUG00000006264	polr1c	50	70.621	Takifugu_rubripes
ENSTBEG00000002254	POLR1C	71	73.228	ENSTNIG00000019804	polr1c	99	73.228	Tetraodon_nigroviridis
ENSTBEG00000002254	POLR1C	100	93.820	ENSTTRG00000006344	POLR1C	51	93.820	Tursiops_truncatus
ENSTBEG00000002254	POLR1C	100	98.876	ENSUAMG00000025602	POLR1C	51	98.876	Ursus_americanus
ENSTBEG00000002254	POLR1C	100	98.876	ENSUMAG00000005938	POLR1C	51	98.876	Ursus_maritimus
ENSTBEG00000002254	POLR1C	100	92.135	ENSVVUG00000028922	POLR1C	50	92.135	Vulpes_vulpes
ENSTBEG00000002254	POLR1C	100	77.095	ENSXETG00000010882	polr1c	52	77.095	Xenopus_tropicalis
ENSTBEG00000002254	POLR1C	100	71.910	ENSXCOG00000014185	polr1c	51	71.910	Xiphophorus_couchianus
ENSTBEG00000002254	POLR1C	100	71.910	ENSXMAG00000015076	polr1c	51	71.910	Xiphophorus_maculatus