EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTBEG00000002399 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Tupaia_belangeri
Status: putative
Strand: Minus strand
Length: 7841 bases
Position: chrGeneScaffold_3029:85976-93816
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTBEP00000002061	SMN	PF06003.12	5.6e-71	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTBET00000002382	-	621	-	ENSTBEP00000002061	207 (aa)	-	UPI0000F5F230

Gene Model

Click here to download ENSTBEG00000002399's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTBEG00000002399's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTBEG00000002399	-	89	86.957	ENSG00000172062	SMN1	70	86.957	Homo_sapiens
ENSTBEG00000002399	-	89	86.957	ENSG00000205571	SMN2	70	86.957	Homo_sapiens
ENSTBEG00000002399	-	87	56.354	ENSAPOG00000011324	smn1	64	55.435	Acanthochromis_polyacanthus
ENSTBEG00000002399	-	89	87.500	ENSAMEG00000003316	-	64	88.021	Ailuropoda_melanoleuca
ENSTBEG00000002399	-	86	54.749	ENSACIG00000019772	-	58	59.236	Amphilophus_citrinellus
ENSTBEG00000002399	-	58	67.500	ENSACIG00000007598	smn1	86	57.233	Amphilophus_citrinellus
ENSTBEG00000002399	-	87	56.354	ENSAOCG00000024444	smn1	65	55.435	Amphiprion_ocellaris
ENSTBEG00000002399	-	87	56.906	ENSAPEG00000016504	smn1	65	55.978	Amphiprion_percula
ENSTBEG00000002399	-	57	57.265	ENSAPLG00000010912	-	51	59.615	Anas_platyrhynchos
ENSTBEG00000002399	-	90	63.298	ENSACAG00000010017	-	63	63.687	Anolis_carolinensis
ENSTBEG00000002399	-	100	85.238	ENSANAG00000032133	-	62	87.500	Aotus_nancymaae
ENSTBEG00000002399	-	79	62.195	ENSACLG00000007308	smn1	53	63.694	Astatotilapia_calliptera
ENSTBEG00000002399	-	68	57.857	ENSAMXG00000013884	smn1	55	56.051	Astyanax_mexicanus
ENSTBEG00000002399	-	95	83.756	ENSBTAG00000005743	SMN2	63	82.609	Bos_taurus
ENSTBEG00000002399	-	89	88.043	ENSCJAG00000016290	-	70	88.043	Callithrix_jacchus
ENSTBEG00000002399	-	100	87.440	ENSCAFG00000007812	SMN	66	86.979	Canis_familiaris
ENSTBEG00000002399	-	100	87.440	ENSCAFG00020019229	-	62	86.979	Canis_lupus_dingo
ENSTBEG00000002399	-	95	85.279	ENSCHIG00000015559	-	62	83.696	Capra_hircus
ENSTBEG00000002399	-	93	86.979	ENSTSYG00000012058	-	74	86.979	Carlito_syrichta
ENSTBEG00000002399	-	65	80.000	ENSCAPG00000011021	-	65	77.083	Cavia_aperea
ENSTBEG00000002399	-	93	79.500	ENSCPOG00000012328	-	64	80.952	Cavia_porcellus
ENSTBEG00000002399	-	93	80.513	ENSCPOG00000036973	-	62	82.065	Cavia_porcellus
ENSTBEG00000002399	-	89	86.957	ENSCCAG00000018127	-	70	86.957	Cebus_capucinus
ENSTBEG00000002399	-	89	88.043	ENSCATG00000037002	-	70	88.043	Cercocebus_atys
ENSTBEG00000002399	-	89	77.202	ENSCLAG00000000284	-	71	77.778	Chinchilla_lanigera
ENSTBEG00000002399	-	89	87.500	ENSCSAG00000015688	-	62	87.500	Chlorocebus_sabaeus
ENSTBEG00000002399	-	81	85.714	ENSCHOG00000007346	-	67	85.714	Choloepus_hoffmanni
ENSTBEG00000002399	-	93	63.402	ENSCPBG00000010968	-	65	65.294	Chrysemys_picta_bellii
ENSTBEG00000002399	-	100	79.621	ENSCANG00000033324	-	70	83.696	Colobus_angolensis_palliatus
ENSTBEG00000002399	-	89	88.587	ENSCANG00000038242	-	70	88.587	Colobus_angolensis_palliatus
ENSTBEG00000002399	-	93	84.896	ENSCGRG00001017959	-	66	84.896	Cricetulus_griseus_chok1gshd
ENSTBEG00000002399	-	93	60.417	ENSCGRG00001016998	-	60	60.417	Cricetulus_griseus_chok1gshd
ENSTBEG00000002399	-	93	84.896	ENSCGRG00000007698	Smn1	66	84.896	Cricetulus_griseus_crigri
ENSTBEG00000002399	-	92	49.741	ENSCSEG00000015227	smn1	54	57.862	Cynoglossus_semilaevis
ENSTBEG00000002399	-	76	61.783	ENSCVAG00000007498	smn1	54	61.783	Cyprinodon_variegatus
ENSTBEG00000002399	-	83	51.724	ENSDARG00000018494	smn1	55	57.325	Danio_rerio
ENSTBEG00000002399	-	70	84.828	ENSDNOG00000007283	-	60	84.828	Dasypus_novemcinctus
ENSTBEG00000002399	-	100	71.981	ENSDNOG00000045949	-	76	71.978	Dasypus_novemcinctus
ENSTBEG00000002399	-	88	71.585	ENSDORG00000007082	Smn1	62	71.585	Dipodomys_ordii
ENSTBEG00000002399	-	100	73.430	ENSETEG00000001406	-	93	72.396	Echinops_telfairi
ENSTBEG00000002399	-	63	45.139	ENSEBUG00000011902	smn1	77	36.199	Eptatretus_burgeri
ENSTBEG00000002399	-	93	71.875	ENSEASG00005018000	-	61	76.271	Equus_asinus_asinus
ENSTBEG00000002399	-	93	84.896	ENSECAG00000015215	-	66	84.896	Equus_caballus
ENSTBEG00000002399	-	81	82.143	ENSEEUG00000015777	-	68	82.143	Erinaceus_europaeus
ENSTBEG00000002399	-	91	54.315	ENSELUG00000018067	smn1	63	54.494	Esox_lucius
ENSTBEG00000002399	-	93	87.047	ENSFCAG00000028292	SMN	75	87.047	Felis_catus
ENSTBEG00000002399	-	87	63.587	ENSFALG00000012320	-	59	64.286	Ficedula_albicollis
ENSTBEG00000002399	-	100	79.535	ENSFDAG00000017683	-	64	80.423	Fukomys_damarensis
ENSTBEG00000002399	-	86	54.190	ENSFHEG00000018508	smn1	55	60.897	Fundulus_heteroclitus
ENSTBEG00000002399	-	86	49.457	ENSGMOG00000017279	smn1	64	49.451	Gadus_morhua
ENSTBEG00000002399	-	90	62.963	ENSGALG00000002430	SMN	63	64.205	Gallus_gallus
ENSTBEG00000002399	-	83	55.618	ENSGAFG00000009501	smn1	59	59.873	Gambusia_affinis
ENSTBEG00000002399	-	92	55.497	ENSGACG00000010584	smn1	59	59.412	Gasterosteus_aculeatus
ENSTBEG00000002399	-	92	63.542	ENSGAGG00000011374	-	65	65.193	Gopherus_agassizii
ENSTBEG00000002399	-	87	38.983	ENSGAGG00000013639	-	57	47.826	Gopherus_agassizii
ENSTBEG00000002399	-	89	86.957	ENSGGOG00000026704	-	86	86.957	Gorilla_gorilla
ENSTBEG00000002399	-	89	86.957	ENSGGOG00000003872	-	74	86.957	Gorilla_gorilla
ENSTBEG00000002399	-	87	58.564	ENSHBUG00000013987	smn1	55	63.694	Haplochromis_burtoni
ENSTBEG00000002399	-	100	77.143	ENSHGLG00000001905	-	64	79.235	Heterocephalus_glaber_female
ENSTBEG00000002399	-	100	78.140	ENSHGLG00000001018	-	64	79.365	Heterocephalus_glaber_female
ENSTBEG00000002399	-	100	78.140	ENSHGLG00100011252	-	64	79.365	Heterocephalus_glaber_male
ENSTBEG00000002399	-	100	77.143	ENSHGLG00100018676	-	67	79.235	Heterocephalus_glaber_male
ENSTBEG00000002399	-	88	53.804	ENSHCOG00000017136	smn1	52	57.051	Hippocampus_comes
ENSTBEG00000002399	-	88	87.912	ENSSTOG00000012288	-	66	87.500	Ictidomys_tridecemlineatus
ENSTBEG00000002399	-	84	66.092	ENSJJAG00000014853	-	89	66.286	Jaculus_jaculus
ENSTBEG00000002399	-	87	57.222	ENSKMAG00000007239	smn1	57	59.412	Kryptolebias_marmoratus
ENSTBEG00000002399	-	78	60.494	ENSLBEG00000022550	smn1	56	60.494	Labrus_bergylta
ENSTBEG00000002399	-	77	39.264	ENSLACG00000009808	-	53	39.264	Latimeria_chalumnae
ENSTBEG00000002399	-	88	55.914	ENSLOCG00000011339	smn1	66	59.538	Lepisosteus_oculatus
ENSTBEG00000002399	-	92	84.615	ENSLAFG00000003425	-	64	84.694	Loxodonta_africana
ENSTBEG00000002399	-	89	84.239	ENSMFAG00000008812	-	62	84.239	Macaca_fascicularis
ENSTBEG00000002399	-	89	88.043	ENSMFAG00000031523	SMN1	70	88.043	Macaca_fascicularis
ENSTBEG00000002399	-	89	83.152	ENSMMUG00000030594	-	62	83.152	Macaca_mulatta
ENSTBEG00000002399	-	89	88.043	ENSMMUG00000020214	SMN1	70	88.043	Macaca_mulatta
ENSTBEG00000002399	-	89	88.043	ENSMNEG00000035094	-	70	88.043	Macaca_nemestrina
ENSTBEG00000002399	-	87	87.293	ENSMLEG00000041902	-	69	87.293	Mandrillus_leucophaeus
ENSTBEG00000002399	-	87	58.011	ENSMAMG00000011034	smn1	54	62.420	Mastacembelus_armatus
ENSTBEG00000002399	-	86	58.659	ENSMZEG00005013634	smn1	55	63.694	Maylandia_zebra
ENSTBEG00000002399	-	57	56.410	ENSMGAG00000008889	-	51	57.692	Meleagris_gallopavo
ENSTBEG00000002399	-	93	83.333	ENSMAUG00000010262	Smn1	66	83.333	Mesocricetus_auratus
ENSTBEG00000002399	-	95	89.796	ENSMICG00000034708	-	81	89.503	Microcebus_murinus
ENSTBEG00000002399	-	93	81.250	ENSMOCG00000017833	Smn1	66	81.250	Microtus_ochrogaster
ENSTBEG00000002399	-	89	54.450	ENSMMOG00000005504	smn1	66	56.111	Mola_mola
ENSTBEG00000002399	-	90	70.000	ENSMODG00000001436	-	64	71.277	Monodelphis_domestica
ENSTBEG00000002399	-	87	54.011	ENSMALG00000008025	smn1	54	61.146	Monopterus_albus
ENSTBEG00000002399	-	93	82.292	MGP_CAROLIEiJ_G0018836	Smn1	66	82.292	Mus_caroli
ENSTBEG00000002399	-	93	81.771	ENSMUSG00000021645	Smn1	66	81.771	Mus_musculus
ENSTBEG00000002399	-	100	79.710	MGP_PahariEiJ_G0015911	Smn1	66	78.646	Mus_pahari
ENSTBEG00000002399	-	93	81.771	MGP_SPRETEiJ_G0019718	Smn1	66	81.771	Mus_spretus
ENSTBEG00000002399	-	93	89.119	ENSMPUG00000014470	-	68	89.119	Mustela_putorius_furo
ENSTBEG00000002399	-	96	87.437	ENSMLUG00000010603	-	62	86.458	Myotis_lucifugus
ENSTBEG00000002399	-	100	85.024	ENSNGAG00000019833	Smn1	66	84.375	Nannospalax_galili
ENSTBEG00000002399	-	86	59.218	ENSNBRG00000023000	smn1	54	64.331	Neolamprologus_brichardi
ENSTBEG00000002399	-	93	85.641	ENSNLEG00000004454	-	70	86.957	Nomascus_leucogenys
ENSTBEG00000002399	-	69	63.699	ENSMEUG00000011393	-	65	65.986	Notamacropus_eugenii
ENSTBEG00000002399	-	81	81.548	ENSOPRG00000002015	-	66	81.548	Ochotona_princeps
ENSTBEG00000002399	-	90	82.258	ENSODEG00000015976	-	67	81.771	Octodon_degus
ENSTBEG00000002399	-	87	58.564	ENSONIG00000011799	smn1	55	63.522	Oreochromis_niloticus
ENSTBEG00000002399	-	86	62.570	ENSOANG00000001626	-	64	64.804	Ornithorhynchus_anatinus
ENSTBEG00000002399	-	93	74.611	ENSOCUG00000025183	-	62	74.093	Oryctolagus_cuniculus
ENSTBEG00000002399	-	93	83.333	ENSOCUG00000026649	-	69	83.333	Oryctolagus_cuniculus
ENSTBEG00000002399	-	93	87.565	ENSOCUG00000017097	-	68	87.047	Oryctolagus_cuniculus
ENSTBEG00000002399	-	76	61.146	ENSORLG00000010552	smn1	54	62.025	Oryzias_latipes
ENSTBEG00000002399	-	76	62.420	ENSORLG00020007936	smn1	59	62.420	Oryzias_latipes_hni
ENSTBEG00000002399	-	76	61.146	ENSORLG00015022425	smn1	54	61.146	Oryzias_latipes_hsok
ENSTBEG00000002399	-	73	61.589	ENSOMEG00000007824	smn1	54	61.392	Oryzias_melastigma
ENSTBEG00000002399	-	96	74.500	ENSOGAG00000031414	-	64	72.973	Otolemur_garnettii
ENSTBEG00000002399	-	93	81.250	ENSOARG00000005425	-	64	80.226	Ovis_aries
ENSTBEG00000002399	-	89	86.413	ENSPPAG00000036640	-	70	86.413	Pan_paniscus
ENSTBEG00000002399	-	93	87.047	ENSPPRG00000005575	-	75	87.047	Panthera_pardus
ENSTBEG00000002399	-	93	87.047	ENSPTIG00000007745	-	75	87.047	Panthera_tigris_altaica
ENSTBEG00000002399	-	89	86.957	ENSPTRG00000016955	-	70	86.957	Pan_troglodytes
ENSTBEG00000002399	-	89	85.326	ENSPANG00000000253	-	67	85.326	Papio_anubis
ENSTBEG00000002399	-	93	86.667	ENSPANG00000013601	-	70	88.043	Papio_anubis
ENSTBEG00000002399	-	89	49.744	ENSPKIG00000011096	smn1	62	55.975	Paramormyrops_kingsleyae
ENSTBEG00000002399	-	87	62.963	ENSPSIG00000014787	-	61	61.202	Pelodiscus_sinensis
ENSTBEG00000002399	-	76	52.071	ENSPMGG00000012285	smn1	58	57.764	Periophthalmus_magnuspinnatus
ENSTBEG00000002399	-	98	41.463	ENSPMAG00000005004	smn1	58	42.197	Petromyzon_marinus
ENSTBEG00000002399	-	58	52.033	ENSPMAG00000000277	-	98	52.033	Petromyzon_marinus
ENSTBEG00000002399	-	90	70.000	ENSPCIG00000025764	-	65	71.277	Phascolarctos_cinereus
ENSTBEG00000002399	-	78	59.877	ENSPFOG00000007786	smn1	54	61.146	Poecilia_formosa
ENSTBEG00000002399	-	86	55.866	ENSPLAG00000012071	smn1	59	61.146	Poecilia_latipinna
ENSTBEG00000002399	-	86	55.307	ENSPMEG00000017085	smn1	59	60.510	Poecilia_mexicana
ENSTBEG00000002399	-	83	57.303	ENSPREG00000005824	smn1	59	61.783	Poecilia_reticulata
ENSTBEG00000002399	-	82	84.706	ENSPPYG00000015533	-	61	84.706	Pongo_abelii
ENSTBEG00000002399	-	71	74.658	ENSPPYG00000019189	-	74	74.658	Pongo_abelii
ENSTBEG00000002399	-	88	81.915	ENSPCAG00000004187	-	64	83.140	Procavia_capensis
ENSTBEG00000002399	-	84	89.080	ENSPCOG00000022307	-	74	88.957	Propithecus_coquereli
ENSTBEG00000002399	-	88	87.363	ENSPVAG00000005977	-	63	86.957	Pteropus_vampyrus
ENSTBEG00000002399	-	86	59.218	ENSPNYG00000014148	smn1	54	64.331	Pundamilia_nyererei
ENSTBEG00000002399	-	93	80.208	ENSRNOG00000018067	Smn1	66	80.208	Rattus_norvegicus
ENSTBEG00000002399	-	89	88.043	ENSRBIG00000037052	-	70	88.043	Rhinopithecus_bieti
ENSTBEG00000002399	-	98	81.773	ENSRBIG00000036775	-	67	84.239	Rhinopithecus_bieti
ENSTBEG00000002399	-	89	88.043	ENSRROG00000039399	-	70	88.043	Rhinopithecus_roxellana
ENSTBEG00000002399	-	98	77.340	ENSRROG00000031088	-	68	79.891	Rhinopithecus_roxellana
ENSTBEG00000002399	-	89	86.957	ENSSBOG00000011665	-	70	86.957	Saimiri_boliviensis_boliviensis
ENSTBEG00000002399	-	82	83.432	ENSSBOG00000020112	-	59	83.432	Saimiri_boliviensis_boliviensis
ENSTBEG00000002399	-	93	69.231	ENSSHAG00000001499	-	63	71.658	Sarcophilus_harrisii
ENSTBEG00000002399	-	77	57.233	ENSSFOG00015015507	smn1	60	56.250	Scleropages_formosus
ENSTBEG00000002399	-	62	62.016	ENSSMAG00000007922	smn1	55	57.055	Scophthalmus_maximus
ENSTBEG00000002399	-	87	56.354	ENSSDUG00000018533	smn1	54	61.146	Seriola_dumerili
ENSTBEG00000002399	-	87	56.906	ENSSLDG00000021135	smn1	54	61.783	Seriola_lalandi_dorsalis
ENSTBEG00000002399	-	93	62.887	ENSSPUG00000000373	-	63	65.730	Sphenodon_punctatus
ENSTBEG00000002399	-	91	54.167	ENSSPAG00000004345	smn1	58	60.510	Stegastes_partitus
ENSTBEG00000002399	-	63	60.000	ENSSSCG00000033865	-	50	60.870	Sus_scrofa
ENSTBEG00000002399	-	89	85.870	ENSSSCG00000016970	-	63	85.870	Sus_scrofa
ENSTBEG00000002399	-	89	65.761	ENSSSCG00000029127	-	67	61.957	Sus_scrofa
ENSTBEG00000002399	-	96	62.376	ENSTGUG00000001548	-	63	65.909	Taeniopygia_guttata
ENSTBEG00000002399	-	80	56.364	ENSTRUG00000000736	smn	63	53.591	Takifugu_rubripes
ENSTBEG00000002399	-	88	86.339	ENSTTRG00000005080	-	63	86.413	Tursiops_truncatus
ENSTBEG00000002399	-	89	88.043	ENSUAMG00000024947	-	70	88.542	Ursus_americanus
ENSTBEG00000002399	-	75	87.821	ENSVPAG00000009887	-	56	87.821	Vicugna_pacos
ENSTBEG00000002399	-	100	87.440	ENSVVUG00000006934	-	66	86.979	Vulpes_vulpes
ENSTBEG00000002399	-	86	57.609	ENSXETG00000018189	smn2	63	56.522	Xenopus_tropicalis
ENSTBEG00000002399	-	62	58.730	ENSXETG00000004912	-	79	58.730	Xenopus_tropicalis
ENSTBEG00000002399	-	77	61.635	ENSXMAG00000001521	smn1	60	61.006	Xiphophorus_maculatus