EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTBEG00000002464 (Gene tree)
Gene ID: -
Gene Symbol: RTL3
Alias: FLJ38865|Mar3|Mart3|SIRH9|ZCCHC5|ZHC5
Full Name: retrotransposon Gag like 3
Gene Type: protein_coding
Species: Tupaia_belangeri
Status: putative
Strand: Minus strand
Length: 1554 bases
Position: chrscaffold_16511:45425-46978
Accession: 22997
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTBEP00000002120	zf-CCHC	PF00098.23	9.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTBET00000002452	RTL3-201	1446	-	ENSTBEP00000002120	481 (aa)	-	UPI0000F5DEA9

Gene Model

Click here to download ENSTBEG00000002464's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTBEG00000002464's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTBEG00000002464	RTL3	100	64.523	ENSG00000179300	RTL3	100	64.523	Homo_sapiens
ENSTBEG00000002464	RTL3	100	62.397	ENSTSYG00000008776	RTL3	100	62.397	Carlito_syrichta
ENSTBEG00000002464	RTL3	100	52.803	ENSCGRG00001015952	Rtl3	100	52.984	Cricetulus_griseus_chok1gshd
ENSTBEG00000002464	RTL3	100	60.904	ENSDORG00000029995	Rtl3	100	60.904	Dipodomys_ordii
ENSTBEG00000002464	RTL3	100	66.061	ENSECAG00000029496	RTL3	100	66.061	Equus_caballus
ENSTBEG00000002464	RTL3	100	59.142	ENSSTOG00000027152	RTL3	100	59.142	Ictidomys_tridecemlineatus
ENSTBEG00000002464	RTL3	100	55.556	ENSJJAG00000014790	-	100	55.556	Jaculus_jaculus
ENSTBEG00000002464	RTL3	100	53.370	ENSMAUG00000011823	Rtl3	100	53.734	Mesocricetus_auratus
ENSTBEG00000002464	RTL3	100	64.777	ENSMICG00000004901	RTL3	100	65.587	Microcebus_murinus
ENSTBEG00000002464	RTL3	100	50.919	ENSMOCG00000017247	Rtl3	100	51.287	Microtus_ochrogaster
ENSTBEG00000002464	RTL3	87	54.312	MGP_CAROLIEiJ_G0033333	Rtl3	76	54.545	Mus_caroli
ENSTBEG00000002464	RTL3	88	54.734	ENSMUSG00000047686	Rtl3	75	54.965	Mus_musculus
ENSTBEG00000002464	RTL3	100	46.903	MGP_PahariEiJ_G0031869	Rtl3	100	47.257	Mus_pahari
ENSTBEG00000002464	RTL3	88	54.503	MGP_SPRETEiJ_G0034497	Rtl3	75	54.734	Mus_spretus
ENSTBEG00000002464	RTL3	100	51.664	ENSNGAG00000002851	Rtl3	77	55.581	Nannospalax_galili
ENSTBEG00000002464	RTL3	100	58.792	ENSOCUG00000025689	RTL3	100	55.950	Oryctolagus_cuniculus
ENSTBEG00000002464	RTL3	100	70.722	ENSPCOG00000016711	RTL3	100	70.722	Propithecus_coquereli
ENSTBEG00000002464	RTL3	100	47.276	ENSRNOG00000002429	Rtl3	100	47.452	Rattus_norvegicus