EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSTBEG00000002707 (Gene tree)
Gene ID
-
Gene Symbol
CPSF3
Alias
CPSF-73|CPSF73|YSH1
Full Name
cleavage and polyadenylation specific factor 3
Gene Type
protein_coding
Species
Tupaia_belangeri
Status
putative
Strand
Plus strand
Length
42037 bases
Position
chrGeneScaffold_3275:197956-239992
Accession
2326
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSTBEP00000002355CPSF73-100_CPF11718.81.3e-2611
ENSTBEP00000002355Beta-CaspPF10996.81.4e-3311
ENSTBEP00000002355Lactamase_BPF00753.272.5e-1811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSTBET00000002719CPSF3-2011956-ENSTBEP00000002355651 (aa)-UPI0000F60889
Gene Model
Click here to download ENSTBEG00000002707's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSTBEG00000002707's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSTBEG00000002707CPSF38593.699ENSG00000119203CPSF310085.294Homo_sapiens
ENSTBEG00000002707CPSF36192.179ENSAPOG00000012241CPSF37292.179Acanthochromis_polyacanthus
ENSTBEG00000002707CPSF38490.634ENSAPOG00000022087cpsf38490.634Acanthochromis_polyacanthus
ENSTBEG00000002707CPSF38593.699ENSAMEG00000008493CPSF38593.699Ailuropoda_melanoleuca
ENSTBEG00000002707CPSF37687.821ENSACIG00000023663CPSF38387.821Amphilophus_citrinellus
ENSTBEG00000002707CPSF36386.495ENSACIG00000009846cpsf36686.495Amphilophus_citrinellus
ENSTBEG00000002707CPSF38490.634ENSAOCG00000022056cpsf38490.634Amphiprion_ocellaris
ENSTBEG00000002707CPSF38491.989ENSAOCG00000010077CPSF38491.989Amphiprion_ocellaris
ENSTBEG00000002707CPSF38490.634ENSAPEG00000019526cpsf38490.634Amphiprion_percula
ENSTBEG00000002707CPSF38491.989ENSAPEG00000021167CPSF38491.989Amphiprion_percula
ENSTBEG00000002707CPSF38491.989ENSATEG00000014525CPSF38391.989Anabas_testudineus
ENSTBEG00000002707CPSF38490.358ENSATEG00000003959cpsf38490.358Anabas_testudineus
ENSTBEG00000002707CPSF38392.635ENSAPLG00000006941CPSF38492.635Anas_platyrhynchos
ENSTBEG00000002707CPSF37792.405ENSACAG00000001759CPSF38492.405Anolis_carolinensis
ENSTBEG00000002707CPSF38593.699ENSANAG00000031254CPSF38893.699Aotus_nancymaae
ENSTBEG00000002707CPSF37688.141ENSACLG00000018846CPSF38388.141Astatotilapia_calliptera
ENSTBEG00000002707CPSF38290.517ENSACLG00000014484cpsf38490.517Astatotilapia_calliptera
ENSTBEG00000002707CPSF38491.713ENSAMXG00000004786cpsf38491.713Astyanax_mexicanus
ENSTBEG00000002707CPSF38593.699ENSBTAG00000019735CPSF38593.699Bos_taurus
ENSTBEG00000002707CPSF37065.470WBGene00013460cpsf-36765.470Caenorhabditis_elegans
ENSTBEG00000002707CPSF38593.699ENSCJAG00000006276CPSF38593.699Callithrix_jacchus
ENSTBEG00000002707CPSF38593.699ENSCAFG00000003375CPSF38193.699Canis_familiaris
ENSTBEG00000002707CPSF37593.699ENSCAFG00020026799CPSF38493.699Canis_lupus_dingo
ENSTBEG00000002707CPSF38593.699ENSCHIG00000013973CPSF38593.699Capra_hircus
ENSTBEG00000002707CPSF38593.699ENSTSYG00000002967CPSF38593.699Carlito_syrichta
ENSTBEG00000002707CPSF38293.391ENSCAPG00000013851CPSF38593.391Cavia_aperea
ENSTBEG00000002707CPSF38593.699ENSCPOG00000011299CPSF38593.699Cavia_porcellus
ENSTBEG00000002707CPSF38593.699ENSCCAG00000036730CPSF38593.699Cebus_capucinus
ENSTBEG00000002707CPSF38593.699ENSCATG00000014770CPSF38593.699Cercocebus_atys
ENSTBEG00000002707CPSF38593.699ENSCLAG00000002727CPSF38593.699Chinchilla_lanigera
ENSTBEG00000002707CPSF37692.628ENSCSAG00000007125CPSF38492.628Chlorocebus_sabaeus
ENSTBEG00000002707CPSF367100.000ENSCHOG00000000180CPSF36798.696Choloepus_hoffmanni
ENSTBEG00000002707CPSF38493.132ENSCPBG00000014074CPSF38493.132Chrysemys_picta_bellii
ENSTBEG00000002707CPSF37177.008ENSCING00000007214-6777.008Ciona_intestinalis
ENSTBEG00000002707CPSF38582.645ENSCANG00000034435CPSF38482.645Colobus_angolensis_palliatus
ENSTBEG00000002707CPSF38593.151ENSCGRG00001013134Cpsf38593.151Cricetulus_griseus_chok1gshd
ENSTBEG00000002707CPSF38593.151ENSCGRG00000018319Cpsf38593.151Cricetulus_griseus_crigri
ENSTBEG00000002707CPSF38491.160ENSCSEG00000002021CPSF38491.160Cynoglossus_semilaevis
ENSTBEG00000002707CPSF38491.713ENSCVAG00000015067CPSF38491.713Cyprinodon_variegatus
ENSTBEG00000002707CPSF38491.713ENSDARG00000027649cpsf38491.713Danio_rerio
ENSTBEG00000002707CPSF38593.425ENSDNOG00000008940CPSF38193.425Dasypus_novemcinctus
ENSTBEG00000002707CPSF37593.699ENSDORG00000014263Cpsf38093.699Dipodomys_ordii
ENSTBEG00000002707CPSF37176.243FBgn0261065Cpsf736876.243Drosophila_melanogaster
ENSTBEG00000002707CPSF37578.431ENSETEG00000003893CPSF38078.431Echinops_telfairi
ENSTBEG00000002707CPSF37186.981ENSEBUG00000009018cpsf36586.981Eptatretus_burgeri
ENSTBEG00000002707CPSF38593.699ENSEASG00005003970CPSF38593.699Equus_asinus_asinus
ENSTBEG00000002707CPSF38593.699ENSECAG00000019911CPSF38593.699Equus_caballus
ENSTBEG00000002707CPSF38590.137ENSEEUG00000015422CPSF38590.137Erinaceus_europaeus
ENSTBEG00000002707CPSF38490.634ENSELUG00000013775cpsf38490.634Esox_lucius
ENSTBEG00000002707CPSF38593.699ENSFCAG00000007852CPSF38593.699Felis_catus
ENSTBEG00000002707CPSF37992.988ENSFALG00000006572CPSF38592.988Ficedula_albicollis
ENSTBEG00000002707CPSF38493.425ENSFDAG00000006317CPSF38493.425Fukomys_damarensis
ENSTBEG00000002707CPSF38489.807ENSFHEG00000014774cpsf38489.807Fundulus_heteroclitus
ENSTBEG00000002707CPSF38490.358ENSGMOG00000003157cpsf38490.358Gadus_morhua
ENSTBEG00000002707CPSF38493.646ENSGALG00000016424CPSF38493.646Gallus_gallus
ENSTBEG00000002707CPSF38491.989ENSGAFG00000008016CPSF38491.989Gambusia_affinis
ENSTBEG00000002707CPSF37686.174ENSGAFG00000019449cpsf38386.174Gambusia_affinis
ENSTBEG00000002707CPSF35299.333ENSGAGG00000025583CPSF37399.333Gopherus_agassizii
ENSTBEG00000002707CPSF38589.474ENSGGOG00000001757CPSF38492.722Gorilla_gorilla
ENSTBEG00000002707CPSF38490.110ENSHBUG00000001188cpsf38490.110Haplochromis_burtoni
ENSTBEG00000002707CPSF38593.425ENSHGLG00000000666CPSF38593.425Heterocephalus_glaber_female
ENSTBEG00000002707CPSF38593.425ENSHGLG00100007765CPSF38593.425Heterocephalus_glaber_male
ENSTBEG00000002707CPSF38491.713ENSHCOG00000015957CPSF38391.713Hippocampus_comes
ENSTBEG00000002707CPSF38490.110ENSHCOG00000007251cpsf38490.110Hippocampus_comes
ENSTBEG00000002707CPSF38491.160ENSIPUG00000023488cpsf38491.160Ictalurus_punctatus
ENSTBEG00000002707CPSF38593.699ENSSTOG00000004476CPSF38593.699Ictidomys_tridecemlineatus
ENSTBEG00000002707CPSF38592.603ENSJJAG00000023415Cpsf38592.603Jaculus_jaculus
ENSTBEG00000002707CPSF38490.083ENSKMAG00000002806cpsf38490.083Kryptolebias_marmoratus
ENSTBEG00000002707CPSF38491.713ENSKMAG00000007317CPSF38491.713Kryptolebias_marmoratus
ENSTBEG00000002707CPSF38487.603ENSLBEG00000020569cpsf38187.603Labrus_bergylta
ENSTBEG00000002707CPSF37191.989ENSLBEG00000013492CPSF37091.989Labrus_bergylta
ENSTBEG00000002707CPSF38491.989ENSLACG00000008308CPSF39091.989Latimeria_chalumnae
ENSTBEG00000002707CPSF38491.713ENSLOCG00000016823cpsf38491.713Lepisosteus_oculatus
ENSTBEG00000002707CPSF38491.136ENSLAFG00000009467CPSF38591.136Loxodonta_africana
ENSTBEG00000002707CPSF38593.699ENSMFAG00000001339CPSF38593.699Macaca_fascicularis
ENSTBEG00000002707CPSF37992.988ENSMMUG00000018038CPSF38592.988Macaca_mulatta
ENSTBEG00000002707CPSF376100.000ENSMNEG00000039447CPSF384100.000Macaca_nemestrina
ENSTBEG00000002707CPSF38593.699ENSMLEG00000026825CPSF38593.699Mandrillus_leucophaeus
ENSTBEG00000002707CPSF37687.821ENSMAMG00000008835CPSF38387.821Mastacembelus_armatus
ENSTBEG00000002707CPSF38490.884ENSMAMG00000003076cpsf38490.884Mastacembelus_armatus
ENSTBEG00000002707CPSF38490.110ENSMZEG00005014358cpsf38490.110Maylandia_zebra
ENSTBEG00000002707CPSF38491.989ENSMZEG00005006258CPSF38491.989Maylandia_zebra
ENSTBEG00000002707CPSF38293.391ENSMGAG00000013995CPSF38593.391Meleagris_gallopavo
ENSTBEG00000002707CPSF38589.041ENSMICG00000002363CPSF38589.041Microcebus_murinus
ENSTBEG00000002707CPSF38593.151ENSMOCG00000020067Cpsf38593.151Microtus_ochrogaster
ENSTBEG00000002707CPSF36390.244ENSMMOG00000018212CPSF36590.244Mola_mola
ENSTBEG00000002707CPSF37864.615ENSMMOG00000011923CPSF38469.892Mola_mola
ENSTBEG00000002707CPSF38593.699ENSMODG00000014703CPSF38693.699Monodelphis_domestica
ENSTBEG00000002707CPSF38490.385ENSMALG00000016416cpsf38490.385Monopterus_albus
ENSTBEG00000002707CPSF37787.539ENSMALG00000011474CPSF38487.539Monopterus_albus
ENSTBEG00000002707CPSF38593.151MGP_CAROLIEiJ_G0017640Cpsf38593.151Mus_caroli
ENSTBEG00000002707CPSF38593.151ENSMUSG00000054309Cpsf39690.254Mus_musculus
ENSTBEG00000002707CPSF38593.151MGP_PahariEiJ_G0029397Cpsf38593.151Mus_pahari
ENSTBEG00000002707CPSF38593.151MGP_SPRETEiJ_G0018481Cpsf38593.151Mus_spretus
ENSTBEG00000002707CPSF38593.699ENSMPUG00000013213CPSF38593.699Mustela_putorius_furo
ENSTBEG00000002707CPSF38593.699ENSMLUG00000010636CPSF38593.699Myotis_lucifugus
ENSTBEG00000002707CPSF38593.151ENSNGAG00000019836Cpsf38593.151Nannospalax_galili
ENSTBEG00000002707CPSF37688.141ENSNBRG00000010525CPSF38388.141Neolamprologus_brichardi
ENSTBEG00000002707CPSF38490.110ENSNBRG00000004770cpsf38490.110Neolamprologus_brichardi
ENSTBEG00000002707CPSF38593.699ENSNLEG00000013359CPSF38593.699Nomascus_leucogenys
ENSTBEG00000002707CPSF37681.416ENSMEUG00000013117-7781.416Notamacropus_eugenii
ENSTBEG00000002707CPSF38576.986ENSOPRG00000008902CPSF38576.986Ochotona_princeps
ENSTBEG00000002707CPSF38593.425ENSODEG00000003129CPSF38593.425Octodon_degus
ENSTBEG00000002707CPSF38490.110ENSONIG00000018812cpsf38490.110Oreochromis_niloticus
ENSTBEG00000002707CPSF36498.696ENSOANG00000008577CPSF38098.696Ornithorhynchus_anatinus
ENSTBEG00000002707CPSF38593.699ENSOCUG00000003728CPSF38593.699Oryctolagus_cuniculus
ENSTBEG00000002707CPSF38489.835ENSORLG00000018854cpsf38489.835Oryzias_latipes
ENSTBEG00000002707CPSF38489.835ENSORLG00020013331cpsf38489.835Oryzias_latipes_hni
ENSTBEG00000002707CPSF38489.835ENSORLG00015011017cpsf38489.835Oryzias_latipes_hsok
ENSTBEG00000002707CPSF38490.110ENSOMEG00000010647cpsf38090.110Oryzias_melastigma
ENSTBEG00000002707CPSF38585.753ENSOGAG00000001680CPSF38585.753Otolemur_garnettii
ENSTBEG00000002707CPSF38593.699ENSOARG00000015073CPSF38593.699Ovis_aries
ENSTBEG00000002707CPSF38593.699ENSPPAG00000042457CPSF38593.699Pan_paniscus
ENSTBEG00000002707CPSF38593.699ENSPPRG00000016790CPSF38593.699Panthera_pardus
ENSTBEG00000002707CPSF38493.629ENSPTIG00000003920CPSF38593.629Panthera_tigris_altaica
ENSTBEG00000002707CPSF38593.699ENSPTRG00000011638CPSF38593.699Pan_troglodytes
ENSTBEG00000002707CPSF38593.699ENSPANG00000016798CPSF38593.699Papio_anubis
ENSTBEG00000002707CPSF38491.736ENSPKIG00000023646cpsf38491.736Paramormyrops_kingsleyae
ENSTBEG00000002707CPSF38491.758ENSPSIG00000016144CPSF38591.758Pelodiscus_sinensis
ENSTBEG00000002707CPSF37686.817ENSPMGG00000006141-8186.817Periophthalmus_magnuspinnatus
ENSTBEG00000002707CPSF38593.151ENSPEMG00000017668Cpsf38593.151Peromyscus_maniculatus_bairdii
ENSTBEG00000002707CPSF36688.556ENSPMAG00000004841cpsf38088.556Petromyzon_marinus
ENSTBEG00000002707CPSF38293.391ENSPCIG00000009823CPSF39093.391Phascolarctos_cinereus
ENSTBEG00000002707CPSF38489.835ENSPFOG00000015922cpsf38489.835Poecilia_formosa
ENSTBEG00000002707CPSF38492.265ENSPFOG00000010418-8492.265Poecilia_formosa
ENSTBEG00000002707CPSF38489.835ENSPLAG00000000882cpsf38489.835Poecilia_latipinna
ENSTBEG00000002707CPSF38489.835ENSPMEG00000018309cpsf38489.835Poecilia_mexicana
ENSTBEG00000002707CPSF38491.989ENSPREG00000004482CPSF38391.989Poecilia_reticulata
ENSTBEG00000002707CPSF37686.174ENSPREG00000014875cpsf38386.174Poecilia_reticulata
ENSTBEG00000002707CPSF38585.989ENSPPYG00000012666CPSF38585.989Pongo_abelii
ENSTBEG00000002707CPSF36196.875ENSPCAG00000015042CPSF36196.875Procavia_capensis
ENSTBEG00000002707CPSF37184.043ENSPCOG00000023016CPSF38184.043Propithecus_coquereli
ENSTBEG00000002707CPSF38493.699ENSPVAG00000005324CPSF38593.699Pteropus_vampyrus
ENSTBEG00000002707CPSF38490.110ENSPNYG00000004405cpsf38490.110Pundamilia_nyererei
ENSTBEG00000002707CPSF36388.141ENSPNYG00000021047CPSF36988.141Pundamilia_nyererei
ENSTBEG00000002707CPSF38491.713ENSPNAG00000023060cpsf38491.713Pygocentrus_nattereri
ENSTBEG00000002707CPSF38493.151ENSRNOG00000052418Cpsf38593.151Rattus_norvegicus
ENSTBEG00000002707CPSF37990.411ENSRBIG00000041615CPSF38192.683Rhinopithecus_bieti
ENSTBEG00000002707CPSF38593.699ENSRROG00000033792CPSF38593.699Rhinopithecus_roxellana
ENSTBEG00000002707CPSF38190.191ENSSBOG00000027263CPSF38290.191Saimiri_boliviensis_boliviensis
ENSTBEG00000002707CPSF38593.699ENSSHAG00000007024CPSF38593.699Sarcophilus_harrisii
ENSTBEG00000002707CPSF38491.484ENSSFOG00015002108cpsf38491.484Scleropages_formosus
ENSTBEG00000002707CPSF37191.713ENSSMAG00000020534CPSF37091.713Scophthalmus_maximus
ENSTBEG00000002707CPSF38491.989ENSSDUG00000018498CPSF38491.989Seriola_dumerili
ENSTBEG00000002707CPSF38490.385ENSSDUG00000002828cpsf38290.385Seriola_dumerili
ENSTBEG00000002707CPSF38491.989ENSSLDG00000005234CPSF38491.989Seriola_lalandi_dorsalis
ENSTBEG00000002707CPSF38490.385ENSSLDG00000008469cpsf38290.385Seriola_lalandi_dorsalis
ENSTBEG00000002707CPSF371100.000ENSSARG00000005186CPSF368100.000Sorex_araneus
ENSTBEG00000002707CPSF38290.341ENSSPUG00000015525CPSF38390.341Sphenodon_punctatus
ENSTBEG00000002707CPSF38491.989ENSSPAG00000002906CPSF38491.989Stegastes_partitus
ENSTBEG00000002707CPSF38490.909ENSSPAG00000018579cpsf38490.909Stegastes_partitus
ENSTBEG00000002707CPSF38493.699ENSSSCG00000020799CPSF38593.699Sus_scrofa
ENSTBEG00000002707CPSF38493.646ENSTGUG00000013016CPSF38593.646Taeniopygia_guttata
ENSTBEG00000002707CPSF38490.634ENSTRUG00000007030cpsf38290.634Takifugu_rubripes
ENSTBEG00000002707CPSF37377.429ENSTTRG00000000861CPSF37477.429Tursiops_truncatus
ENSTBEG00000002707CPSF37593.699ENSUAMG00000007535CPSF37493.699Ursus_americanus
ENSTBEG00000002707CPSF37992.988ENSUMAG00000003676CPSF38592.988Ursus_maritimus
ENSTBEG00000002707CPSF37093.391ENSVPAG00000008041CPSF37293.391Vicugna_pacos
ENSTBEG00000002707CPSF38593.699ENSVVUG00000002194CPSF38593.699Vulpes_vulpes
ENSTBEG00000002707CPSF38493.132ENSXETG00000008263cpsf38493.132Xenopus_tropicalis
ENSTBEG00000002707CPSF38490.110ENSXCOG00000019695cpsf38490.110Xiphophorus_couchianus
ENSTBEG00000002707CPSF38491.989ENSXMAG00000027291CPSF38491.989Xiphophorus_maculatus
ENSTBEG00000002707CPSF38490.110ENSXMAG00000009784cpsf38490.110Xiphophorus_maculatus

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