EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTBEG00000002851 (Gene tree)
Gene ID: -
Gene Symbol: PABPC1L
Alias: C20orf119|PABPC1L1|dJ1069P2.3|ePAB
Full Name: poly(A) binding protein cytoplasmic 1 like
Gene Type: protein_coding
Species: Tupaia_belangeri
Status: putative
Strand: Plus strand
Length: 29951 bases
Position: chrGeneScaffold_4112:48520-78470
Accession: 15797
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTBEP00000002469	PABP	PF00658.18	2.3e-27	1	1
ENSTBEP00000002469	RRM_5	PF13893.6	1.4e-07	1	1
ENSTBEP00000002469	RRM_1	PF00076.22	2.8e-67	1	3
ENSTBEP00000002469	RRM_1	PF00076.22	2.8e-67	2	3
ENSTBEP00000002469	RRM_1	PF00076.22	2.8e-67	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTBET00000002852	PABPC1L-201	1845	-	ENSTBEP00000002469	614 (aa)	-	UPI0000F5EBF0

Gene Model

Click here to download ENSTBEG00000002851's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTBEG00000002851's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTBEG00000002851	PABPC1L	79	72.260	ENSTBEG00000009320	PABPC1	82	72.260
ENSTBEG00000002851	PABPC1L	57	70.297	ENSTBEG00000009035	PABPC4	72	67.568

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTBEG00000002851	PABPC1L	80	94.178	ENSG00000101104	PABPC1L	99	94.178	Homo_sapiens
ENSTBEG00000002851	PABPC1L	79	76.712	ENSAPOG00000010842	pabpc1l	93	76.712	Acanthochromis_polyacanthus
ENSTBEG00000002851	PABPC1L	66	94.178	ENSAMEG00000004099	PABPC1L	79	94.178	Ailuropoda_melanoleuca
ENSTBEG00000002851	PABPC1L	79	77.397	ENSACIG00000021004	-	99	76.030	Amphilophus_citrinellus
ENSTBEG00000002851	PABPC1L	79	76.712	ENSAOCG00000006167	-	94	76.712	Amphiprion_ocellaris
ENSTBEG00000002851	PABPC1L	79	76.712	ENSAPEG00000010558	-	92	81.188	Amphiprion_percula
ENSTBEG00000002851	PABPC1L	79	77.397	ENSATEG00000007428	pabpc1l	94	77.397	Anabas_testudineus
ENSTBEG00000002851	PABPC1L	77	81.625	ENSAPLG00000008415	PABPC1L	93	81.315	Anas_platyrhynchos
ENSTBEG00000002851	PABPC1L	78	83.562	ENSACAG00000011841	PABPC1L	93	83.562	Anolis_carolinensis
ENSTBEG00000002851	PABPC1L	80	91.781	ENSANAG00000026826	PABPC1L	94	91.781	Aotus_nancymaae
ENSTBEG00000002851	PABPC1L	79	77.055	ENSACLG00000024791	pabpc1l	94	77.055	Astatotilapia_calliptera
ENSTBEG00000002851	PABPC1L	78	80.137	ENSAMXG00000013552	pabpc1l	93	80.137	Astyanax_mexicanus
ENSTBEG00000002851	PABPC1L	80	91.781	ENSCJAG00000017628	PABPC1L	94	91.781	Callithrix_jacchus
ENSTBEG00000002851	PABPC1L	62	93.493	ENSCAFG00000009573	PABPC1L	73	93.493	Canis_familiaris
ENSTBEG00000002851	PABPC1L	80	93.836	ENSCAFG00020013828	PABPC1L	94	93.836	Canis_lupus_dingo
ENSTBEG00000002851	PABPC1L	78	94.863	ENSCHIG00000025759	PABPC1L	85	94.863	Capra_hircus
ENSTBEG00000002851	PABPC1L	80	92.123	ENSTSYG00000006645	PABPC1L	94	92.123	Carlito_syrichta
ENSTBEG00000002851	PABPC1L	79	88.288	ENSCAPG00000014519	PABPC1L	97	88.288	Cavia_aperea
ENSTBEG00000002851	PABPC1L	80	88.699	ENSCPOG00000013633	PABPC1L	94	88.699	Cavia_porcellus
ENSTBEG00000002851	PABPC1L	79	92.466	ENSCCAG00000023338	PABPC1L	94	92.466	Cebus_capucinus
ENSTBEG00000002851	PABPC1L	80	94.521	ENSCATG00000034065	PABPC1L	94	94.521	Cercocebus_atys
ENSTBEG00000002851	PABPC1L	79	87.329	ENSCLAG00000005298	PABPC1L	94	87.329	Chinchilla_lanigera
ENSTBEG00000002851	PABPC1L	80	94.178	ENSCSAG00000014242	PABPC1L	94	94.178	Chlorocebus_sabaeus
ENSTBEG00000002851	PABPC1L	61	69.388	ENSCING00000002796	-	66	69.388	Ciona_intestinalis
ENSTBEG00000002851	PABPC1L	76	68.367	ENSCSAVG00000004246	-	92	68.367	Ciona_savignyi
ENSTBEG00000002851	PABPC1L	77	66.783	ENSCSAVG00000003102	-	98	81.507	Ciona_savignyi
ENSTBEG00000002851	PABPC1L	80	94.521	ENSCANG00000037530	PABPC1L	94	94.521	Colobus_angolensis_palliatus
ENSTBEG00000002851	PABPC1L	80	84.932	ENSCGRG00001021938	Pabpc1l	97	84.932	Cricetulus_griseus_chok1gshd
ENSTBEG00000002851	PABPC1L	80	84.932	ENSCGRG00000007946	Pabpc1l	97	84.932	Cricetulus_griseus_crigri
ENSTBEG00000002851	PABPC1L	78	76.125	ENSCSEG00000021295	pabpc1l	95	76.125	Cynoglossus_semilaevis
ENSTBEG00000002851	PABPC1L	79	76.370	ENSCVAG00000015943	-	86	87.692	Cyprinodon_variegatus
ENSTBEG00000002851	PABPC1L	79	77.740	ENSDARG00000002597	pabpc1l	88	87.692	Danio_rerio
ENSTBEG00000002851	PABPC1L	80	94.521	ENSDNOG00000048450	PABPC1L	94	94.521	Dasypus_novemcinctus
ENSTBEG00000002851	PABPC1L	80	90.411	ENSDORG00000001067	Pabpc1l	97	90.411	Dipodomys_ordii
ENSTBEG00000002851	PABPC1L	78	90.244	ENSETEG00000009969	PABPC1L	72	90.244	Echinops_telfairi
ENSTBEG00000002851	PABPC1L	80	91.438	ENSEEUG00000005978	PABPC1L	95	91.438	Erinaceus_europaeus
ENSTBEG00000002851	PABPC1L	79	77.474	ENSELUG00000001811	pabpc1l	94	77.474	Esox_lucius
ENSTBEG00000002851	PABPC1L	80	94.863	ENSFCAG00000011692	PABPC1L	94	94.863	Felis_catus
ENSTBEG00000002851	PABPC1L	68	85.616	ENSFALG00000005372	PABPC1L	84	85.616	Ficedula_albicollis
ENSTBEG00000002851	PABPC1L	80	89.726	ENSFDAG00000008291	PABPC1L	94	89.726	Fukomys_damarensis
ENSTBEG00000002851	PABPC1L	79	77.397	ENSFHEG00000003398	pabpc1l	94	77.397	Fundulus_heteroclitus
ENSTBEG00000002851	PABPC1L	79	76.712	ENSGMOG00000004437	pabpc1l	93	76.712	Gadus_morhua
ENSTBEG00000002851	PABPC1L	64	82.772	ENSGALG00000004123	PABPC1L	91	84.247	Gallus_gallus
ENSTBEG00000002851	PABPC1L	79	69.136	ENSGAFG00000021057	pabpc1l	94	69.136	Gambusia_affinis
ENSTBEG00000002851	PABPC1L	79	77.397	ENSGACG00000002792	pabpc1l	94	77.397	Gasterosteus_aculeatus
ENSTBEG00000002851	PABPC1L	79	83.562	ENSGAGG00000000589	PABPC1L	93	83.562	Gopherus_agassizii
ENSTBEG00000002851	PABPC1L	80	94.178	ENSGGOG00000004584	PABPC1L	94	94.178	Gorilla_gorilla
ENSTBEG00000002851	PABPC1L	79	77.055	ENSHBUG00000006134	pabpc1l	94	77.055	Haplochromis_burtoni
ENSTBEG00000002851	PABPC1L	80	89.726	ENSHGLG00000008434	PABPC1L	94	89.726	Heterocephalus_glaber_female
ENSTBEG00000002851	PABPC1L	80	89.726	ENSHGLG00100012151	PABPC1L	94	89.726	Heterocephalus_glaber_male
ENSTBEG00000002851	PABPC1L	78	77.740	ENSHCOG00000009270	pabpc1l	94	76.404	Hippocampus_comes
ENSTBEG00000002851	PABPC1L	79	80.479	ENSIPUG00000012602	pabpc1l	94	80.479	Ictalurus_punctatus
ENSTBEG00000002851	PABPC1L	80	92.466	ENSSTOG00000003739	PABPC1L	94	92.466	Ictidomys_tridecemlineatus
ENSTBEG00000002851	PABPC1L	79	65.625	ENSJJAG00000022406	Pabpc1l	77	64.433	Jaculus_jaculus
ENSTBEG00000002851	PABPC1L	80	77.397	ENSKMAG00000016847	pabpc1l	95	77.397	Kryptolebias_marmoratus
ENSTBEG00000002851	PABPC1L	79	76.370	ENSLBEG00000010084	pabpc1l	94	76.370	Labrus_bergylta
ENSTBEG00000002851	PABPC1L	79	81.507	ENSLACG00000005762	PABPC1L	93	81.507	Latimeria_chalumnae
ENSTBEG00000002851	PABPC1L	79	79.795	ENSLOCG00000007519	pabpc1l	92	79.795	Lepisosteus_oculatus
ENSTBEG00000002851	PABPC1L	79	93.836	ENSLAFG00000003553	PABPC1L	94	93.836	Loxodonta_africana
ENSTBEG00000002851	PABPC1L	80	94.521	ENSMFAG00000040365	PABPC1L	94	94.521	Macaca_fascicularis
ENSTBEG00000002851	PABPC1L	80	94.521	ENSMNEG00000032298	PABPC1L	94	94.521	Macaca_nemestrina
ENSTBEG00000002851	PABPC1L	80	94.521	ENSMLEG00000043139	PABPC1L	94	94.521	Mandrillus_leucophaeus
ENSTBEG00000002851	PABPC1L	77	75.342	ENSMAMG00000011854	pabpc1l	92	75.342	Mastacembelus_armatus
ENSTBEG00000002851	PABPC1L	79	77.055	ENSMZEG00005023713	pabpc1l	94	77.055	Maylandia_zebra
ENSTBEG00000002851	PABPC1L	79	84.247	ENSMGAG00000003674	PABPC1L	93	84.247	Meleagris_gallopavo
ENSTBEG00000002851	PABPC1L	80	85.616	ENSMOCG00000013186	Pabpc1l	97	85.616	Microtus_ochrogaster
ENSTBEG00000002851	PABPC1L	79	77.397	ENSMMOG00000020574	-	90	87.692	Mola_mola
ENSTBEG00000002851	PABPC1L	77	87.671	ENSMODG00000016198	PABPC1L	93	87.671	Monodelphis_domestica
ENSTBEG00000002851	PABPC1L	77	75.685	ENSMALG00000021622	pabpc1l	99	75.685	Monopterus_albus
ENSTBEG00000002851	PABPC1L	79	85.616	MGP_CAROLIEiJ_G0024627	Pabpc1l	95	85.616	Mus_caroli
ENSTBEG00000002851	PABPC1L	79	85.616	ENSMUSG00000054582	Pabpc1l	95	85.616	Mus_musculus
ENSTBEG00000002851	PABPC1L	79	85.274	MGP_PahariEiJ_G0026071	Pabpc1l	95	85.274	Mus_pahari
ENSTBEG00000002851	PABPC1L	79	85.616	MGP_SPRETEiJ_G0025549	Pabpc1l	95	85.616	Mus_spretus
ENSTBEG00000002851	PABPC1L	79	94.521	ENSMPUG00000017646	PABPC1L	93	94.521	Mustela_putorius_furo
ENSTBEG00000002851	PABPC1L	78	87.458	ENSMLUG00000006324	PABPC1L	92	87.458	Myotis_lucifugus
ENSTBEG00000002851	PABPC1L	80	88.014	ENSNGAG00000010458	Pabpc1l	96	88.014	Nannospalax_galili
ENSTBEG00000002851	PABPC1L	79	77.055	ENSNBRG00000016633	pabpc1l	99	75.655	Neolamprologus_brichardi
ENSTBEG00000002851	PABPC1L	80	86.644	ENSMEUG00000007905	-	95	86.644	Notamacropus_eugenii
ENSTBEG00000002851	PABPC1L	80	91.438	ENSOPRG00000011846	PABPC1L	94	91.438	Ochotona_princeps
ENSTBEG00000002851	PABPC1L	73	89.041	ENSODEG00000015482	PABPC1L	94	89.041	Octodon_degus
ENSTBEG00000002851	PABPC1L	79	77.055	ENSONIG00000017314	pabpc1l	94	77.055	Oreochromis_niloticus
ENSTBEG00000002851	PABPC1L	69	70.847	ENSOANG00000015793	-	94	70.270	Ornithorhynchus_anatinus
ENSTBEG00000002851	PABPC1L	79	93.493	ENSOCUG00000003005	PABPC1L	95	93.493	Oryctolagus_cuniculus
ENSTBEG00000002851	PABPC1L	79	78.082	ENSORLG00000010322	pabpc1l	99	76.779	Oryzias_latipes
ENSTBEG00000002851	PABPC1L	79	78.082	ENSORLG00020021193	pabpc1l	99	76.779	Oryzias_latipes_hni
ENSTBEG00000002851	PABPC1L	79	78.082	ENSORLG00015017018	pabpc1l	99	76.779	Oryzias_latipes_hsok
ENSTBEG00000002851	PABPC1L	79	71.340	ENSOMEG00000010789	pabpc1l	94	71.340	Oryzias_melastigma
ENSTBEG00000002851	PABPC1L	79	92.808	ENSOGAG00000032999	PABPC1L	94	92.808	Otolemur_garnettii
ENSTBEG00000002851	PABPC1L	79	95.205	ENSOARG00000004578	PABPC1L	93	95.205	Ovis_aries
ENSTBEG00000002851	PABPC1L	80	93.836	ENSPPAG00000039677	PABPC1L	94	93.836	Pan_paniscus
ENSTBEG00000002851	PABPC1L	79	94.755	ENSPTIG00000006524	PABPC1L	94	94.755	Panthera_tigris_altaica
ENSTBEG00000002851	PABPC1L	80	94.521	ENSPANG00000018788	PABPC1L	94	94.521	Papio_anubis
ENSTBEG00000002851	PABPC1L	79	79.110	ENSPKIG00000007322	pabpc1l	94	79.110	Paramormyrops_kingsleyae
ENSTBEG00000002851	PABPC1L	79	84.932	ENSPEMG00000020671	Pabpc1l	94	84.932	Peromyscus_maniculatus_bairdii
ENSTBEG00000002851	PABPC1L	79	77.055	ENSPFOG00000013241	pabpc1l	94	77.055	Poecilia_formosa
ENSTBEG00000002851	PABPC1L	79	77.055	ENSPLAG00000017490	-	94	77.055	Poecilia_latipinna
ENSTBEG00000002851	PABPC1L	79	77.055	ENSPMEG00000007677	pabpc1l	94	77.055	Poecilia_mexicana
ENSTBEG00000002851	PABPC1L	80	94.178	ENSPPYG00000011042	PABPC1L	94	94.178	Pongo_abelii
ENSTBEG00000002851	PABPC1L	79	92.466	ENSPCOG00000020630	PABPC1L	94	92.466	Propithecus_coquereli
ENSTBEG00000002851	PABPC1L	80	93.814	ENSPVAG00000012663	PABPC1L	94	93.814	Pteropus_vampyrus
ENSTBEG00000002851	PABPC1L	79	77.055	ENSPNYG00000004101	pabpc1l	94	77.055	Pundamilia_nyererei
ENSTBEG00000002851	PABPC1L	77	79.795	ENSPNAG00000021248	pabpc1l	89	79.795	Pygocentrus_nattereri
ENSTBEG00000002851	PABPC1L	80	85.959	ENSRNOG00000012750	Pabpc1l	96	85.959	Rattus_norvegicus
ENSTBEG00000002851	PABPC1L	80	94.178	ENSRBIG00000035381	PABPC1L	94	94.178	Rhinopithecus_bieti
ENSTBEG00000002851	PABPC1L	80	93.493	ENSRROG00000044498	PABPC1L	94	93.493	Rhinopithecus_roxellana
ENSTBEG00000002851	PABPC1L	80	92.808	ENSSBOG00000009532	-	94	92.808	Saimiri_boliviensis_boliviensis
ENSTBEG00000002851	PABPC1L	78	80.488	ENSSHAG00000011446	PABPC1L	94	80.488	Sarcophilus_harrisii
ENSTBEG00000002851	PABPC1L	79	81.164	ENSSFOG00015017304	pabpc1l	94	81.164	Scleropages_formosus
ENSTBEG00000002851	PABPC1L	79	77.397	ENSSMAG00000010516	pabpc1l	98	87.597	Scophthalmus_maximus
ENSTBEG00000002851	PABPC1L	79	78.082	ENSSDUG00000014743	pabpc1l	94	78.082	Seriola_dumerili
ENSTBEG00000002851	PABPC1L	76	77.055	ENSSLDG00000006981	pabpc1l	96	77.055	Seriola_lalandi_dorsalis
ENSTBEG00000002851	PABPC1L	79	81.849	ENSSPUG00000004233	PABPC1L	93	81.849	Sphenodon_punctatus
ENSTBEG00000002851	PABPC1L	78	76.027	ENSSPAG00000017137	pabpc1l	93	76.027	Stegastes_partitus
ENSTBEG00000002851	PABPC1L	79	94.178	ENSSSCG00000007382	PABPC1L	94	94.178	Sus_scrofa
ENSTBEG00000002851	PABPC1L	79	82.237	ENSTGUG00000005114	PABPC1L	94	82.237	Taeniopygia_guttata
ENSTBEG00000002851	PABPC1L	77	77.397	ENSTRUG00000011085	pabpc1l	93	77.397	Takifugu_rubripes
ENSTBEG00000002851	PABPC1L	79	72.696	ENSTNIG00000017903	pabpc1l	93	72.696	Tetraodon_nigroviridis
ENSTBEG00000002851	PABPC1L	74	90.411	ENSTTRG00000007618	PABPC1L	94	90.411	Tursiops_truncatus
ENSTBEG00000002851	PABPC1L	79	94.178	ENSUAMG00000017682	PABPC1L	93	94.178	Ursus_americanus
ENSTBEG00000002851	PABPC1L	80	94.178	ENSVVUG00000018939	PABPC1L	98	92.760	Vulpes_vulpes
ENSTBEG00000002851	PABPC1L	78	75.265	ENSXETG00000022831	pabpc1l	93	75.265	Xenopus_tropicalis
ENSTBEG00000002851	PABPC1L	79	76.712	ENSXCOG00000005459	pabpc1l	99	83.688	Xiphophorus_couchianus
ENSTBEG00000002851	PABPC1L	79	76.712	ENSXMAG00000017135	pabpc1l	94	76.712	Xiphophorus_maculatus