EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTBEG00000003072 (Gene tree)
Gene ID: -
Gene Symbol: SF3B5
Alias: MGC3133|SF3b10|Ysf3
Full Name: splicing factor 3b subunit 5
Gene Type: protein_coding
Species: Tupaia_belangeri
Status: putative
Strand: Minus strand
Length: 261 bases
Position: chrscaffold_273:46845-47105
Accession: 21083
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTBEP00000002635	SF3b10	PF07189.11	1.4e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTBET00000003048	SF3B5-201	261	-	ENSTBEP00000002635	86 (aa)	-	UPI0000F5EA41

Gene Model

Click here to download ENSTBEG00000003072's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTBEG00000003072's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTBEG00000003072	SF3B5	100	98.837	ENSG00000169976	SF3B5	100	98.837	Homo_sapiens
ENSTBEG00000003072	SF3B5	99	92.941	ENSAPOG00000001721	sf3b5	99	92.941	Acanthochromis_polyacanthus
ENSTBEG00000003072	SF3B5	99	95.294	ENSACIG00000008106	sf3b5	99	95.294	Amphilophus_citrinellus
ENSTBEG00000003072	SF3B5	99	92.941	ENSAOCG00000023367	sf3b5	99	92.941	Amphiprion_ocellaris
ENSTBEG00000003072	SF3B5	99	92.941	ENSAPEG00000004605	sf3b5	99	92.941	Amphiprion_percula
ENSTBEG00000003072	SF3B5	99	94.118	ENSATEG00000009720	sf3b5	99	94.118	Anabas_testudineus
ENSTBEG00000003072	SF3B5	100	95.349	ENSACAG00000007948	SF3B5	100	95.349	Anolis_carolinensis
ENSTBEG00000003072	SF3B5	100	98.837	ENSANAG00000019999	SF3B5	100	98.837	Aotus_nancymaae
ENSTBEG00000003072	SF3B5	99	95.294	ENSACLG00000022410	sf3b5	99	95.294	Astatotilapia_calliptera
ENSTBEG00000003072	SF3B5	100	98.837	ENSBTAG00000009795	SF3B5	100	98.837	Bos_taurus
ENSTBEG00000003072	SF3B5	100	98.837	ENSCJAG00000046566	SF3B5	100	98.837	Callithrix_jacchus
ENSTBEG00000003072	SF3B5	100	98.837	ENSCAFG00000032495	SF3B5	100	98.837	Canis_familiaris
ENSTBEG00000003072	SF3B5	100	98.837	ENSCAFG00020000873	SF3B5	100	98.837	Canis_lupus_dingo
ENSTBEG00000003072	SF3B5	100	98.837	ENSCHIG00000007987	SF3B5	100	98.837	Capra_hircus
ENSTBEG00000003072	SF3B5	100	98.837	ENSTSYG00000012236	SF3B5	100	98.837	Carlito_syrichta
ENSTBEG00000003072	SF3B5	100	98.837	ENSCPOG00000012435	SF3B5	100	98.837	Cavia_porcellus
ENSTBEG00000003072	SF3B5	100	98.837	ENSCCAG00000006528	SF3B5	100	98.837	Cebus_capucinus
ENSTBEG00000003072	SF3B5	100	98.837	ENSCATG00000010192	SF3B5	100	98.837	Cercocebus_atys
ENSTBEG00000003072	SF3B5	100	98.837	ENSCLAG00000017802	SF3B5	100	98.837	Chinchilla_lanigera
ENSTBEG00000003072	SF3B5	100	98.837	ENSCSAG00000000187	SF3B5	100	98.837	Chlorocebus_sabaeus
ENSTBEG00000003072	SF3B5	100	97.674	ENSCPBG00000017148	SF3B5	100	97.674	Chrysemys_picta_bellii
ENSTBEG00000003072	SF3B5	97	75.904	ENSCING00000021953	-	97	75.904	Ciona_intestinalis
ENSTBEG00000003072	SF3B5	100	98.837	ENSCANG00000002639	SF3B5	100	98.837	Colobus_angolensis_palliatus
ENSTBEG00000003072	SF3B5	100	97.674	ENSCGRG00001007249	Sf3b5	100	97.674	Cricetulus_griseus_chok1gshd
ENSTBEG00000003072	SF3B5	100	97.674	ENSCGRG00000019185	Sf3b5	100	97.674	Cricetulus_griseus_crigri
ENSTBEG00000003072	SF3B5	100	93.023	ENSCSEG00000003216	sf3b5	100	93.023	Cynoglossus_semilaevis
ENSTBEG00000003072	SF3B5	99	94.118	ENSCVAG00000005040	sf3b5	99	94.118	Cyprinodon_variegatus
ENSTBEG00000003072	SF3B5	99	96.471	ENSDARG00000016855	sf3b5	99	96.471	Danio_rerio
ENSTBEG00000003072	SF3B5	100	98.837	ENSDNOG00000048829	SF3B5	82	98.837	Dasypus_novemcinctus
ENSTBEG00000003072	SF3B5	100	98.837	ENSDORG00000005838	Sf3b5	100	98.837	Dipodomys_ordii
ENSTBEG00000003072	SF3B5	99	84.706	FBgn0040534	Sf3b5	100	84.706	Drosophila_melanogaster
ENSTBEG00000003072	SF3B5	100	98.837	ENSETEG00000004047	SF3B5	100	98.837	Echinops_telfairi
ENSTBEG00000003072	SF3B5	99	83.529	ENSEBUG00000002311	sf3b5	100	83.529	Eptatretus_burgeri
ENSTBEG00000003072	SF3B5	100	98.837	ENSEASG00005009522	SF3B5	100	98.837	Equus_asinus_asinus
ENSTBEG00000003072	SF3B5	100	98.837	ENSECAG00000005457	SF3B5	100	98.837	Equus_caballus
ENSTBEG00000003072	SF3B5	99	92.941	ENSELUG00000014290	SF3B5	99	92.941	Esox_lucius
ENSTBEG00000003072	SF3B5	100	98.837	ENSFCAG00000000936	SF3B5	100	98.837	Felis_catus
ENSTBEG00000003072	SF3B5	100	94.186	ENSFALG00000015012	SF3B5	100	94.186	Ficedula_albicollis
ENSTBEG00000003072	SF3B5	100	98.837	ENSFDAG00000003664	SF3B5	100	98.837	Fukomys_damarensis
ENSTBEG00000003072	SF3B5	99	94.118	ENSFHEG00000020301	sf3b5	99	94.118	Fundulus_heteroclitus
ENSTBEG00000003072	SF3B5	99	94.118	ENSGMOG00000019972	sf3b5	99	94.118	Gadus_morhua
ENSTBEG00000003072	SF3B5	100	96.512	ENSGALG00000030824	SF3B5	100	96.512	Gallus_gallus
ENSTBEG00000003072	SF3B5	99	94.118	ENSGAFG00000000271	sf3b5	99	94.118	Gambusia_affinis
ENSTBEG00000003072	SF3B5	99	94.118	ENSGACG00000010363	sf3b5	99	94.118	Gasterosteus_aculeatus
ENSTBEG00000003072	SF3B5	100	97.674	ENSGAGG00000011434	SF3B5	100	97.674	Gopherus_agassizii
ENSTBEG00000003072	SF3B5	100	91.860	ENSGAGG00000000646	-	100	91.860	Gopherus_agassizii
ENSTBEG00000003072	SF3B5	100	98.837	ENSGGOG00000001537	SF3B5	100	98.837	Gorilla_gorilla
ENSTBEG00000003072	SF3B5	99	95.294	ENSHBUG00000008925	sf3b5	99	95.294	Haplochromis_burtoni
ENSTBEG00000003072	SF3B5	100	98.837	ENSHGLG00000021406	SF3B5	100	98.837	Heterocephalus_glaber_female
ENSTBEG00000003072	SF3B5	100	98.837	ENSHGLG00100020370	SF3B5	100	98.837	Heterocephalus_glaber_male
ENSTBEG00000003072	SF3B5	99	92.941	ENSHCOG00000016802	sf3b5	99	92.941	Hippocampus_comes
ENSTBEG00000003072	SF3B5	99	92.941	ENSHCOG00000016806	sf3b5	99	92.941	Hippocampus_comes
ENSTBEG00000003072	SF3B5	99	92.941	ENSHCOG00000009115	-	99	92.941	Hippocampus_comes
ENSTBEG00000003072	SF3B5	99	96.471	ENSIPUG00000015166	sf3b5	99	96.471	Ictalurus_punctatus
ENSTBEG00000003072	SF3B5	100	98.837	ENSSTOG00000003347	SF3B5	100	98.837	Ictidomys_tridecemlineatus
ENSTBEG00000003072	SF3B5	100	98.837	ENSJJAG00000001857	Sf3b5	100	98.837	Jaculus_jaculus
ENSTBEG00000003072	SF3B5	99	94.118	ENSKMAG00000002249	sf3b5	99	94.118	Kryptolebias_marmoratus
ENSTBEG00000003072	SF3B5	99	94.118	ENSLBEG00000019847	sf3b5	99	94.118	Labrus_bergylta
ENSTBEG00000003072	SF3B5	100	94.186	ENSLACG00000000946	SF3B5	100	94.186	Latimeria_chalumnae
ENSTBEG00000003072	SF3B5	99	95.294	ENSLOCG00000017352	sf3b5	99	95.294	Lepisosteus_oculatus
ENSTBEG00000003072	SF3B5	100	98.837	ENSLAFG00000032489	SF3B5	100	98.837	Loxodonta_africana
ENSTBEG00000003072	SF3B5	100	98.837	ENSMFAG00000029753	SF3B5	100	98.837	Macaca_fascicularis
ENSTBEG00000003072	SF3B5	100	98.837	ENSMMUG00000047691	SF3B5	100	98.837	Macaca_mulatta
ENSTBEG00000003072	SF3B5	100	98.837	ENSMNEG00000028236	SF3B5	100	98.837	Macaca_nemestrina
ENSTBEG00000003072	SF3B5	100	98.837	ENSMLEG00000007622	SF3B5	100	98.837	Mandrillus_leucophaeus
ENSTBEG00000003072	SF3B5	99	95.294	ENSMAMG00000021639	sf3b5	99	95.294	Mastacembelus_armatus
ENSTBEG00000003072	SF3B5	99	95.294	ENSMZEG00005028115	SF3B5	99	95.294	Maylandia_zebra
ENSTBEG00000003072	SF3B5	99	83.529	ENSMZEG00005027407	sf3b5	99	83.529	Maylandia_zebra
ENSTBEG00000003072	SF3B5	99	95.294	ENSMZEG00005027408	sf3b5	99	95.294	Maylandia_zebra
ENSTBEG00000003072	SF3B5	100	96.512	ENSMGAG00000015849	SF3B5	100	96.512	Meleagris_gallopavo
ENSTBEG00000003072	SF3B5	100	97.674	ENSMAUG00000008283	Sf3b5	100	97.674	Mesocricetus_auratus
ENSTBEG00000003072	SF3B5	100	98.837	ENSMICG00000014922	SF3B5	100	98.837	Microcebus_murinus
ENSTBEG00000003072	SF3B5	100	97.674	ENSMOCG00000001713	Sf3b5	100	97.674	Microtus_ochrogaster
ENSTBEG00000003072	SF3B5	99	95.294	ENSMMOG00000007956	sf3b5	99	95.294	Mola_mola
ENSTBEG00000003072	SF3B5	100	98.837	ENSMODG00000023291	SF3B5	83	98.837	Monodelphis_domestica
ENSTBEG00000003072	SF3B5	91	91.358	ENSMALG00000020357	sf3b5	99	91.358	Monopterus_albus
ENSTBEG00000003072	SF3B5	100	97.674	MGP_CAROLIEiJ_G0015120	Sf3b5	100	97.674	Mus_caroli
ENSTBEG00000003072	SF3B5	100	97.674	ENSMUSG00000078348	Sf3b5	100	97.674	Mus_musculus
ENSTBEG00000003072	SF3B5	100	97.674	MGP_PahariEiJ_G0023739	Sf3b5	100	97.674	Mus_pahari
ENSTBEG00000003072	SF3B5	100	97.674	MGP_SPRETEiJ_G0015928	Sf3b5	100	97.674	Mus_spretus
ENSTBEG00000003072	SF3B5	100	98.837	ENSMPUG00000018379	SF3B5	100	98.837	Mustela_putorius_furo
ENSTBEG00000003072	SF3B5	93	95.000	ENSMLUG00000025546	-	93	95.000	Myotis_lucifugus
ENSTBEG00000003072	SF3B5	100	98.837	ENSMLUG00000028504	-	100	98.837	Myotis_lucifugus
ENSTBEG00000003072	SF3B5	100	94.186	ENSMLUG00000010802	-	100	94.186	Myotis_lucifugus
ENSTBEG00000003072	SF3B5	100	98.837	ENSNGAG00000010732	Sf3b5	100	98.837	Nannospalax_galili
ENSTBEG00000003072	SF3B5	99	95.294	ENSNBRG00000014383	sf3b5	99	95.294	Neolamprologus_brichardi
ENSTBEG00000003072	SF3B5	100	98.837	ENSNLEG00000019307	SF3B5	100	98.837	Nomascus_leucogenys
ENSTBEG00000003072	SF3B5	100	98.837	ENSMEUG00000005440	-	100	98.837	Notamacropus_eugenii
ENSTBEG00000003072	SF3B5	100	98.837	ENSMEUG00000005445	-	100	98.837	Notamacropus_eugenii
ENSTBEG00000003072	SF3B5	100	97.674	ENSOPRG00000015107	SF3B5	100	97.674	Ochotona_princeps
ENSTBEG00000003072	SF3B5	100	98.837	ENSODEG00000019507	SF3B5	100	98.837	Octodon_degus
ENSTBEG00000003072	SF3B5	99	95.294	ENSONIG00000020725	sf3b5	99	95.294	Oreochromis_niloticus
ENSTBEG00000003072	SF3B5	69	98.305	ENSOANG00000015301	SF3B5	97	98.305	Ornithorhynchus_anatinus
ENSTBEG00000003072	SF3B5	100	98.837	ENSOCUG00000008752	SF3B5	100	98.837	Oryctolagus_cuniculus
ENSTBEG00000003072	SF3B5	99	96.471	ENSORLG00000004925	sf3b5	99	96.471	Oryzias_latipes
ENSTBEG00000003072	SF3B5	99	96.471	ENSORLG00020011625	sf3b5	99	96.471	Oryzias_latipes_hni
ENSTBEG00000003072	SF3B5	99	96.471	ENSORLG00015017061	sf3b5	99	96.471	Oryzias_latipes_hsok
ENSTBEG00000003072	SF3B5	99	96.471	ENSOMEG00000010620	sf3b5	99	96.471	Oryzias_melastigma
ENSTBEG00000003072	SF3B5	100	98.837	ENSOGAG00000012152	SF3B5	100	98.837	Otolemur_garnettii
ENSTBEG00000003072	SF3B5	100	95.349	ENSOARG00000002617	SF3B5	100	95.349	Ovis_aries
ENSTBEG00000003072	SF3B5	92	98.734	ENSOARG00000019486	-	95	98.734	Ovis_aries
ENSTBEG00000003072	SF3B5	100	98.837	ENSPPAG00000012940	SF3B5	100	98.837	Pan_paniscus
ENSTBEG00000003072	SF3B5	100	98.837	ENSPPRG00000021262	SF3B5	100	98.837	Panthera_pardus
ENSTBEG00000003072	SF3B5	100	98.837	ENSPTIG00000001952	SF3B5	100	98.837	Panthera_tigris_altaica
ENSTBEG00000003072	SF3B5	100	98.837	ENSPTRG00000018676	SF3B5	100	98.837	Pan_troglodytes
ENSTBEG00000003072	SF3B5	100	98.837	ENSPANG00000034242	SF3B5	100	98.837	Papio_anubis
ENSTBEG00000003072	SF3B5	99	95.294	ENSPKIG00000006057	sf3b5	99	95.294	Paramormyrops_kingsleyae
ENSTBEG00000003072	SF3B5	100	97.674	ENSPSIG00000001262	SF3B5	100	97.674	Pelodiscus_sinensis
ENSTBEG00000003072	SF3B5	99	92.941	ENSPMGG00000014804	sf3b5	99	92.941	Periophthalmus_magnuspinnatus
ENSTBEG00000003072	SF3B5	100	97.674	ENSPEMG00000012931	Sf3b5	100	97.674	Peromyscus_maniculatus_bairdii
ENSTBEG00000003072	SF3B5	99	91.765	ENSPMAG00000010296	sf3b5	99	91.765	Petromyzon_marinus
ENSTBEG00000003072	SF3B5	100	77.907	ENSPCIG00000025007	-	100	77.907	Phascolarctos_cinereus
ENSTBEG00000003072	SF3B5	93	100.000	ENSPCIG00000011344	-	78	100.000	Phascolarctos_cinereus
ENSTBEG00000003072	SF3B5	99	94.118	ENSPFOG00000019994	sf3b5	99	94.118	Poecilia_formosa
ENSTBEG00000003072	SF3B5	99	94.118	ENSPLAG00000008412	sf3b5	99	94.118	Poecilia_latipinna
ENSTBEG00000003072	SF3B5	99	94.118	ENSPMEG00000020050	sf3b5	99	94.118	Poecilia_mexicana
ENSTBEG00000003072	SF3B5	99	94.118	ENSPREG00000009242	sf3b5	99	94.118	Poecilia_reticulata
ENSTBEG00000003072	SF3B5	100	98.837	ENSPPYG00000017068	SF3B5	100	98.837	Pongo_abelii
ENSTBEG00000003072	SF3B5	100	98.837	ENSPCAG00000009332	SF3B5	100	98.837	Procavia_capensis
ENSTBEG00000003072	SF3B5	100	98.837	ENSPCOG00000013754	SF3B5	100	98.837	Propithecus_coquereli
ENSTBEG00000003072	SF3B5	56	100.000	ENSPVAG00000002820	SF3B5	100	100.000	Pteropus_vampyrus
ENSTBEG00000003072	SF3B5	99	95.294	ENSPNYG00000002075	sf3b5	99	95.294	Pundamilia_nyererei
ENSTBEG00000003072	SF3B5	99	97.647	ENSPNAG00000004942	sf3b5	99	97.647	Pygocentrus_nattereri
ENSTBEG00000003072	SF3B5	100	97.674	ENSRNOG00000014908	Sf3b5	100	97.674	Rattus_norvegicus
ENSTBEG00000003072	SF3B5	100	98.837	ENSRBIG00000006301	SF3B5	100	98.837	Rhinopithecus_bieti
ENSTBEG00000003072	SF3B5	100	98.837	ENSRROG00000037067	SF3B5	100	98.837	Rhinopithecus_roxellana
ENSTBEG00000003072	SF3B5	100	98.837	ENSSBOG00000006122	SF3B5	100	98.837	Saimiri_boliviensis_boliviensis
ENSTBEG00000003072	SF3B5	100	97.674	ENSSHAG00000015670	SF3B5	100	97.674	Sarcophilus_harrisii
ENSTBEG00000003072	SF3B5	99	96.471	ENSSFOG00015015767	sf3b5	99	96.471	Scleropages_formosus
ENSTBEG00000003072	SF3B5	99	92.941	ENSSMAG00000018852	sf3b5	99	92.941	Scophthalmus_maximus
ENSTBEG00000003072	SF3B5	99	94.118	ENSSDUG00000018161	sf3b5	99	94.118	Seriola_dumerili
ENSTBEG00000003072	SF3B5	99	94.118	ENSSLDG00000014547	sf3b5	99	94.118	Seriola_lalandi_dorsalis
ENSTBEG00000003072	SF3B5	100	98.837	ENSSARG00000007820	SF3B5	100	98.837	Sorex_araneus
ENSTBEG00000003072	SF3B5	99	92.941	ENSSPAG00000017371	-	99	92.941	Stegastes_partitus
ENSTBEG00000003072	SF3B5	99	92.941	ENSSPAG00000009244	sf3b5	99	92.941	Stegastes_partitus
ENSTBEG00000003072	SF3B5	100	98.837	ENSSSCG00000035578	SF3B5	100	98.837	Sus_scrofa
ENSTBEG00000003072	SF3B5	100	96.512	ENSTGUG00000010810	SF3B5	100	96.512	Taeniopygia_guttata
ENSTBEG00000003072	SF3B5	100	91.860	ENSTRUG00000005577	sf3b5	100	91.860	Takifugu_rubripes
ENSTBEG00000003072	SF3B5	100	91.860	ENSTNIG00000001265	sf3b5	100	91.860	Tetraodon_nigroviridis
ENSTBEG00000003072	SF3B5	100	98.837	ENSTTRG00000008817	SF3B5	100	98.837	Tursiops_truncatus
ENSTBEG00000003072	SF3B5	100	98.837	ENSUAMG00000027296	SF3B5	100	98.837	Ursus_americanus
ENSTBEG00000003072	SF3B5	100	98.837	ENSUMAG00000005448	SF3B5	100	98.837	Ursus_maritimus
ENSTBEG00000003072	SF3B5	100	98.837	ENSVPAG00000003826	SF3B5	100	98.837	Vicugna_pacos
ENSTBEG00000003072	SF3B5	100	98.837	ENSVVUG00000004703	SF3B5	100	98.837	Vulpes_vulpes
ENSTBEG00000003072	SF3B5	100	96.512	ENSXETG00000021409	sf3b5	100	96.512	Xenopus_tropicalis
ENSTBEG00000003072	SF3B5	99	94.118	ENSXMAG00000019971	sf3b5	99	94.118	Xiphophorus_maculatus