EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTBEG00000003220 (Gene tree)
Gene ID: -
Gene Symbol: SMG7
Alias: C1orf16|EST1C|KIAA0250|SGA56M|SMG-7
Full Name: SMG7%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Tupaia_belangeri
Status: putative
Strand: Plus strand
Length: 87305 bases
Position: chrGeneScaffold_1612:80612-167916
Accession: 16792
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTBEP00000002810	EST1	PF10374.9	2.7e-08	1	1
ENSTBEP00000002810	EST1_DNA_bind	PF10373.9	8.8e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTBET00000003249	SMG7-201	3495	-	ENSTBEP00000002810	1164 (aa)	-	UPI0000F60BFF

Gene Model

Click here to download ENSTBEG00000003220's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTBEG00000003220's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTBEG00000003220	SMG7	81	93.562	ENSG00000116698	SMG7	78	96.610	Homo_sapiens
ENSTBEG00000003220	SMG7	59	68.000	ENSAPOG00000009611	smg7	69	68.000	Acanthochromis_polyacanthus
ENSTBEG00000003220	SMG7	72	95.763	ENSAMEG00000002357	SMG7	78	95.763	Ailuropoda_melanoleuca
ENSTBEG00000003220	SMG7	62	64.667	ENSACIG00000015152	smg7	80	64.667	Amphilophus_citrinellus
ENSTBEG00000003220	SMG7	75	68.000	ENSAOCG00000013538	smg7	78	68.000	Amphiprion_ocellaris
ENSTBEG00000003220	SMG7	75	68.000	ENSAPEG00000007851	smg7	78	68.000	Amphiprion_percula
ENSTBEG00000003220	SMG7	72	68.000	ENSATEG00000006931	smg7	78	68.000	Anabas_testudineus
ENSTBEG00000003220	SMG7	71	87.166	ENSAPLG00000015811	SMG7	77	87.166	Anas_platyrhynchos
ENSTBEG00000003220	SMG7	75	87.342	ENSACAG00000014989	SMG7	78	87.342	Anolis_carolinensis
ENSTBEG00000003220	SMG7	80	94.206	ENSANAG00000028114	SMG7	81	93.777	Aotus_nancymaae
ENSTBEG00000003220	SMG7	75	68.000	ENSACLG00000022079	smg7	78	68.000	Astatotilapia_calliptera
ENSTBEG00000003220	SMG7	75	68.571	ENSAMXG00000020809	smg7	78	68.571	Astyanax_mexicanus
ENSTBEG00000003220	SMG7	75	96.186	ENSBTAG00000008003	SMG7	75	96.186	Bos_taurus
ENSTBEG00000003220	SMG7	81	93.562	ENSCJAG00000005135	SMG7	78	96.186	Callithrix_jacchus
ENSTBEG00000003220	SMG7	75	95.339	ENSCAFG00000013276	SMG7	75	95.339	Canis_familiaris
ENSTBEG00000003220	SMG7	75	95.339	ENSCAFG00020015475	SMG7	78	95.339	Canis_lupus_dingo
ENSTBEG00000003220	SMG7	75	95.763	ENSCHIG00000018192	SMG7	77	95.763	Capra_hircus
ENSTBEG00000003220	SMG7	81	93.133	ENSTSYG00000002667	SMG7	78	95.339	Carlito_syrichta
ENSTBEG00000003220	SMG7	75	95.763	ENSCPOG00000008906	SMG7	77	95.763	Cavia_porcellus
ENSTBEG00000003220	SMG7	72	96.186	ENSCCAG00000028596	SMG7	78	96.186	Cebus_capucinus
ENSTBEG00000003220	SMG7	75	97.034	ENSCATG00000011063	SMG7	78	97.034	Cercocebus_atys
ENSTBEG00000003220	SMG7	75	93.777	ENSCLAG00000010751	SMG7	77	93.348	Chinchilla_lanigera
ENSTBEG00000003220	SMG7	75	97.034	ENSCSAG00000012654	SMG7	75	97.034	Chlorocebus_sabaeus
ENSTBEG00000003220	SMG7	69	92.593	ENSCHOG00000010522	SMG7	72	92.593	Choloepus_hoffmanni
ENSTBEG00000003220	SMG7	75	91.561	ENSCPBG00000015724	SMG7	78	91.561	Chrysemys_picta_bellii
ENSTBEG00000003220	SMG7	72	96.610	ENSCANG00000015680	SMG7	78	96.610	Colobus_angolensis_palliatus
ENSTBEG00000003220	SMG7	75	93.644	ENSCGRG00001013705	Smg7	77	93.644	Cricetulus_griseus_chok1gshd
ENSTBEG00000003220	SMG7	75	93.644	ENSCGRG00000018401	Smg7	76	93.644	Cricetulus_griseus_crigri
ENSTBEG00000003220	SMG7	74	63.314	ENSCVAG00000011842	smg7	79	63.314	Cyprinodon_variegatus
ENSTBEG00000003220	SMG7	70	68.571	ENSDARG00000060767	smg7	78	68.571	Danio_rerio
ENSTBEG00000003220	SMG7	75	93.220	ENSDORG00000007331	Smg7	77	93.220	Dipodomys_ordii
ENSTBEG00000003220	SMG7	75	93.118	ENSETEG00000002654	SMG7	79	92.688	Echinops_telfairi
ENSTBEG00000003220	SMG7	75	95.763	ENSEASG00005006524	SMG7	77	95.763	Equus_asinus_asinus
ENSTBEG00000003220	SMG7	75	96.186	ENSECAG00000004313	SMG7	77	96.186	Equus_caballus
ENSTBEG00000003220	SMG7	80	92.489	ENSEEUG00000002024	SMG7	80	92.060	Erinaceus_europaeus
ENSTBEG00000003220	SMG7	75	68.000	ENSELUG00000010293	smg7	80	68.000	Esox_lucius
ENSTBEG00000003220	SMG7	81	92.489	ENSFCAG00000010900	SMG7	77	95.763	Felis_catus
ENSTBEG00000003220	SMG7	74	89.496	ENSFALG00000003047	SMG7	78	89.496	Ficedula_albicollis
ENSTBEG00000003220	SMG7	75	94.068	ENSFDAG00000012121	SMG7	77	94.068	Fukomys_damarensis
ENSTBEG00000003220	SMG7	69	65.143	ENSFHEG00000011073	smg7	77	65.143	Fundulus_heteroclitus
ENSTBEG00000003220	SMG7	69	66.286	ENSGMOG00000004916	smg7	75	66.286	Gadus_morhua
ENSTBEG00000003220	SMG7	71	86.702	ENSGALG00000004667	SMG7	77	86.702	Gallus_gallus
ENSTBEG00000003220	SMG7	72	65.341	ENSGAFG00000019000	smg7	78	65.341	Gambusia_affinis
ENSTBEG00000003220	SMG7	75	66.857	ENSGACG00000001634	smg7	79	66.857	Gasterosteus_aculeatus
ENSTBEG00000003220	SMG7	75	95.763	ENSGGOG00000002342	SMG7	78	95.763	Gorilla_gorilla
ENSTBEG00000003220	SMG7	75	68.000	ENSHBUG00000003726	smg7	80	68.000	Haplochromis_burtoni
ENSTBEG00000003220	SMG7	74	94.492	ENSHGLG00000009353	SMG7	77	94.492	Heterocephalus_glaber_female
ENSTBEG00000003220	SMG7	74	94.492	ENSHGLG00100009637	-	77	94.492	Heterocephalus_glaber_male
ENSTBEG00000003220	SMG7	75	85.622	ENSHGLG00100004878	-	77	85.193	Heterocephalus_glaber_male
ENSTBEG00000003220	SMG7	75	68.000	ENSIPUG00000016997	smg7	79	68.000	Ictalurus_punctatus
ENSTBEG00000003220	SMG7	75	96.186	ENSSTOG00000000401	SMG7	77	96.186	Ictidomys_tridecemlineatus
ENSTBEG00000003220	SMG7	75	92.373	ENSJJAG00000012351	Smg7	77	92.373	Jaculus_jaculus
ENSTBEG00000003220	SMG7	58	65.031	ENSKMAG00000004900	smg7	74	65.644	Kryptolebias_marmoratus
ENSTBEG00000003220	SMG7	70	66.857	ENSLBEG00000002983	smg7	77	66.857	Labrus_bergylta
ENSTBEG00000003220	SMG7	75	71.784	ENSLACG00000000972	SMG7	77	71.784	Latimeria_chalumnae
ENSTBEG00000003220	SMG7	75	69.714	ENSLOCG00000002010	smg7	77	69.714	Lepisosteus_oculatus
ENSTBEG00000003220	SMG7	75	95.339	ENSLAFG00000008186	SMG7	77	95.339	Loxodonta_africana
ENSTBEG00000003220	SMG7	75	97.034	ENSMFAG00000031653	SMG7	78	97.034	Macaca_fascicularis
ENSTBEG00000003220	SMG7	81	93.991	ENSMMUG00000018458	SMG7	78	97.034	Macaca_mulatta
ENSTBEG00000003220	SMG7	72	97.034	ENSMNEG00000034798	SMG7	78	97.034	Macaca_nemestrina
ENSTBEG00000003220	SMG7	75	97.034	ENSMLEG00000037170	SMG7	78	97.034	Mandrillus_leucophaeus
ENSTBEG00000003220	SMG7	66	67.429	ENSMAMG00000018733	smg7	68	67.429	Mastacembelus_armatus
ENSTBEG00000003220	SMG7	75	68.000	ENSMZEG00005015247	smg7	78	68.000	Maylandia_zebra
ENSTBEG00000003220	SMG7	71	87.166	ENSMGAG00000001561	SMG7	77	87.166	Meleagris_gallopavo
ENSTBEG00000003220	SMG7	75	94.068	ENSMAUG00000019484	Smg7	77	94.068	Mesocricetus_auratus
ENSTBEG00000003220	SMG7	75	96.610	ENSMICG00000007145	SMG7	76	96.610	Microcebus_murinus
ENSTBEG00000003220	SMG7	75	94.068	ENSMOCG00000020748	Smg7	77	94.068	Microtus_ochrogaster
ENSTBEG00000003220	SMG7	68	66.049	ENSMMOG00000001524	smg7	77	66.667	Mola_mola
ENSTBEG00000003220	SMG7	68	84.906	ENSMODG00000007139	SMG7	80	84.906	Monodelphis_domestica
ENSTBEG00000003220	SMG7	75	68.000	ENSMALG00000000061	smg7	73	68.000	Monopterus_albus
ENSTBEG00000003220	SMG7	75	94.492	MGP_CAROLIEiJ_G0014704	Smg7	77	94.492	Mus_caroli
ENSTBEG00000003220	SMG7	75	94.492	ENSMUSG00000042772	Smg7	77	94.492	Mus_musculus
ENSTBEG00000003220	SMG7	75	94.492	MGP_PahariEiJ_G0027940	Smg7	77	94.492	Mus_pahari
ENSTBEG00000003220	SMG7	75	94.492	MGP_SPRETEiJ_G0015511	Smg7	77	94.492	Mus_spretus
ENSTBEG00000003220	SMG7	74	95.339	ENSMPUG00000011732	SMG7	75	95.339	Mustela_putorius_furo
ENSTBEG00000003220	SMG7	75	94.068	ENSMLUG00000015417	SMG7	77	94.068	Myotis_lucifugus
ENSTBEG00000003220	SMG7	75	92.489	ENSNGAG00000009836	Smg7	76	92.373	Nannospalax_galili
ENSTBEG00000003220	SMG7	68	67.073	ENSNBRG00000024343	smg7	77	67.073	Neolamprologus_brichardi
ENSTBEG00000003220	SMG7	75	96.610	ENSNLEG00000018018	SMG7	78	96.610	Nomascus_leucogenys
ENSTBEG00000003220	SMG7	56	100.000	ENSMEUG00000004681	SMG7	57	100.000	Notamacropus_eugenii
ENSTBEG00000003220	SMG7	77	83.262	ENSOPRG00000013942	SMG7	80	81.545	Ochotona_princeps
ENSTBEG00000003220	SMG7	75	93.644	ENSODEG00000010390	SMG7	77	93.644	Octodon_degus
ENSTBEG00000003220	SMG7	70	68.000	ENSONIG00000000277	smg7	76	68.000	Oreochromis_niloticus
ENSTBEG00000003220	SMG7	74	92.405	ENSOANG00000000994	SMG7	77	92.405	Ornithorhynchus_anatinus
ENSTBEG00000003220	SMG7	75	87.097	ENSOCUG00000005887	SMG7	71	86.667	Oryctolagus_cuniculus
ENSTBEG00000003220	SMG7	75	66.286	ENSORLG00000007314	smg7	79	66.286	Oryzias_latipes
ENSTBEG00000003220	SMG7	75	66.286	ENSORLG00020015779	smg7	79	66.286	Oryzias_latipes_hni
ENSTBEG00000003220	SMG7	75	66.286	ENSORLG00015012289	smg7	79	66.286	Oryzias_latipes_hsok
ENSTBEG00000003220	SMG7	75	66.286	ENSOMEG00000002328	smg7	79	66.286	Oryzias_melastigma
ENSTBEG00000003220	SMG7	81	91.202	ENSOGAG00000003107	SMG7	81	90.558	Otolemur_garnettii
ENSTBEG00000003220	SMG7	75	94.492	ENSOARG00000001352	SMG7	76	94.086	Ovis_aries
ENSTBEG00000003220	SMG7	72	96.610	ENSPPAG00000031619	SMG7	78	96.610	Pan_paniscus
ENSTBEG00000003220	SMG7	81	92.489	ENSPPRG00000011222	SMG7	80	91.845	Panthera_pardus
ENSTBEG00000003220	SMG7	81	92.489	ENSPTIG00000007242	SMG7	78	96.186	Panthera_tigris_altaica
ENSTBEG00000003220	SMG7	81	93.991	ENSPTRG00000001764	SMG7	78	96.610	Pan_troglodytes
ENSTBEG00000003220	SMG7	81	93.991	ENSPANG00000004520	SMG7	81	93.562	Papio_anubis
ENSTBEG00000003220	SMG7	70	66.857	ENSPKIG00000007242	smg7	77	66.857	Paramormyrops_kingsleyae
ENSTBEG00000003220	SMG7	75	91.983	ENSPSIG00000012201	SMG7	77	91.983	Pelodiscus_sinensis
ENSTBEG00000003220	SMG7	75	94.068	ENSPEMG00000011315	Smg7	77	94.068	Peromyscus_maniculatus_bairdii
ENSTBEG00000003220	SMG7	75	92.827	ENSPCIG00000003786	SMG7	78	92.827	Phascolarctos_cinereus
ENSTBEG00000003220	SMG7	75	65.714	ENSPFOG00000019219	smg7	78	65.714	Poecilia_formosa
ENSTBEG00000003220	SMG7	72	65.714	ENSPLAG00000001446	smg7	78	65.714	Poecilia_latipinna
ENSTBEG00000003220	SMG7	72	65.714	ENSPMEG00000005218	smg7	80	65.714	Poecilia_mexicana
ENSTBEG00000003220	SMG7	66	65.143	ENSPREG00000019039	smg7	72	65.143	Poecilia_reticulata
ENSTBEG00000003220	SMG7	71	96.237	ENSPPYG00000000427	SMG7	77	93.264	Pongo_abelii
ENSTBEG00000003220	SMG7	74	94.388	ENSPCAG00000008360	SMG7	75	94.388	Procavia_capensis
ENSTBEG00000003220	SMG7	81	93.562	ENSPCOG00000011996	SMG7	77	96.610	Propithecus_coquereli
ENSTBEG00000003220	SMG7	81	92.291	ENSPVAG00000000851	SMG7	81	91.863	Pteropus_vampyrus
ENSTBEG00000003220	SMG7	75	68.000	ENSPNYG00000007643	smg7	78	68.000	Pundamilia_nyererei
ENSTBEG00000003220	SMG7	75	68.571	ENSPNAG00000011374	smg7	78	68.571	Pygocentrus_nattereri
ENSTBEG00000003220	SMG7	75	92.405	ENSRNOG00000027962	Smg7	81	91.845	Rattus_norvegicus
ENSTBEG00000003220	SMG7	75	96.610	ENSRBIG00000036316	SMG7	78	96.610	Rhinopithecus_bieti
ENSTBEG00000003220	SMG7	75	96.610	ENSRROG00000035719	SMG7	78	96.610	Rhinopithecus_roxellana
ENSTBEG00000003220	SMG7	75	94.915	ENSSBOG00000023454	SMG7	78	94.915	Saimiri_boliviensis_boliviensis
ENSTBEG00000003220	SMG7	73	84.615	ENSSHAG00000013147	SMG7	78	84.211	Sarcophilus_harrisii
ENSTBEG00000003220	SMG7	75	67.429	ENSSFOG00015017252	smg7	76	69.935	Scleropages_formosus
ENSTBEG00000003220	SMG7	69	68.000	ENSSMAG00000006067	smg7	79	68.000	Scophthalmus_maximus
ENSTBEG00000003220	SMG7	66	68.000	ENSSDUG00000017543	smg7	78	68.000	Seriola_dumerili
ENSTBEG00000003220	SMG7	71	84.615	ENSSPUG00000002064	SMG7	78	84.615	Sphenodon_punctatus
ENSTBEG00000003220	SMG7	69	66.667	ENSSPAG00000008733	smg7	77	66.667	Stegastes_partitus
ENSTBEG00000003220	SMG7	75	94.915	ENSSSCG00000015558	SMG7	77	94.915	Sus_scrofa
ENSTBEG00000003220	SMG7	71	86.170	ENSTGUG00000003928	SMG7	78	86.170	Taeniopygia_guttata
ENSTBEG00000003220	SMG7	75	64.205	ENSTNIG00000002802	smg7	78	64.205	Tetraodon_nigroviridis
ENSTBEG00000003220	SMG7	81	93.348	ENSTTRG00000014778	SMG7	81	92.918	Tursiops_truncatus
ENSTBEG00000003220	SMG7	68	95.161	ENSUAMG00000017473	SMG7	76	92.228	Ursus_americanus
ENSTBEG00000003220	SMG7	72	95.339	ENSUMAG00000016389	SMG7	77	95.339	Ursus_maritimus
ENSTBEG00000003220	SMG7	75	95.339	ENSVVUG00000008976	SMG7	77	95.339	Vulpes_vulpes
ENSTBEG00000003220	SMG7	72	69.524	ENSXETG00000012528	smg7	78	69.524	Xenopus_tropicalis
ENSTBEG00000003220	SMG7	72	66.286	ENSXMAG00000007123	smg7	78	66.286	Xiphophorus_maculatus