EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTBEG00000003727 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Tupaia_belangeri
Status: putative
Strand: Plus strand
Length: 4603 bases
Position: chrGeneScaffold_4557:35239-39841
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTBEP00000003226	zf-CCHC	PF00098.23	5.4e-08	1	1
ENSTBEP00000003226	RRM_5	PF13893.6	5.4e-08	1	2
ENSTBEP00000003226	RRM_5	PF13893.6	5.4e-08	2	2
ENSTBEP00000003226	RRM_1	PF00076.22	1.5e-28	1	2
ENSTBEP00000003226	RRM_1	PF00076.22	1.5e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTBET00000003717	-	945	-	ENSTBEP00000003226	314 (aa)	-	UPI0000F5E7CA

Gene Model

Click here to download ENSTBEG00000003727's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTBEG00000003727's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTBEG00000003727	-	68	94.366	ENSTBEG00000003748	RBM4B	64	93.636

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTBEG00000003727	-	68	94.836	ENSG00000173914	RBM4B	97	97.619	Homo_sapiens
ENSTBEG00000003727	-	70	100.000	ENSG00000173933	RBM4	96	100.000	Homo_sapiens
ENSTBEG00000003727	-	70	62.273	ENSG00000248643	RBM14-RBM4	94	42.424	Homo_sapiens
ENSTBEG00000003727	-	70	99.545	ENSAMEG00000010914	RBM4	63	99.545	Ailuropoda_melanoleuca
ENSTBEG00000003727	-	68	94.836	ENSAMEG00000010906	RBM4B	64	94.091	Ailuropoda_melanoleuca
ENSTBEG00000003727	-	68	94.836	ENSANAG00000023478	RBM4B	97	97.619	Aotus_nancymaae
ENSTBEG00000003727	-	68	95.305	ENSBTAG00000000423	RBM4B	62	98.400	Bos_taurus
ENSTBEG00000003727	-	70	98.636	ENSBTAG00000031688	RBM4	64	98.636	Bos_taurus
ENSTBEG00000003727	-	68	94.836	ENSCJAG00000013666	RBM4B	97	97.619	Callithrix_jacchus
ENSTBEG00000003727	-	68	94.836	ENSCAFG00000012378	RBM4B	64	94.091	Canis_familiaris
ENSTBEG00000003727	-	70	99.545	ENSCAFG00000012388	RBM4	63	99.545	Canis_familiaris
ENSTBEG00000003727	-	70	99.545	ENSCAFG00020015515	RBM4	63	99.545	Canis_lupus_dingo
ENSTBEG00000003727	-	68	94.836	ENSCAFG00020015519	RBM4B	92	83.117	Canis_lupus_dingo
ENSTBEG00000003727	-	68	95.305	ENSCHIG00000008907	RBM4B	64	94.545	Capra_hircus
ENSTBEG00000003727	-	70	98.636	ENSCHIG00000020613	RBM4	64	98.636	Capra_hircus
ENSTBEG00000003727	-	68	94.836	ENSCAPG00000009570	RBM4B	64	94.091	Cavia_aperea
ENSTBEG00000003727	-	70	99.545	ENSCAPG00000016600	RBM4	96	99.200	Cavia_aperea
ENSTBEG00000003727	-	68	94.836	ENSCPOG00000013689	RBM4B	64	94.091	Cavia_porcellus
ENSTBEG00000003727	-	70	99.545	ENSCPOG00000013194	RBM4	96	99.200	Cavia_porcellus
ENSTBEG00000003727	-	60	72.872	ENSCCAG00000023319	-	99	72.872	Cebus_capucinus
ENSTBEG00000003727	-	68	94.836	ENSCCAG00000016501	RBM4B	97	97.619	Cebus_capucinus
ENSTBEG00000003727	-	68	94.836	ENSCATG00000035353	RBM4B	97	97.619	Cercocebus_atys
ENSTBEG00000003727	-	70	99.545	ENSCLAG00000014756	RBM4	96	99.200	Chinchilla_lanigera
ENSTBEG00000003727	-	68	94.836	ENSCLAG00000015287	RBM4B	64	94.091	Chinchilla_lanigera
ENSTBEG00000003727	-	68	94.836	ENSCSAG00000008361	RBM4B	64	94.091	Chlorocebus_sabaeus
ENSTBEG00000003727	-	68	94.836	ENSCHOG00000002892	RBM4B	64	94.091	Choloepus_hoffmanni
ENSTBEG00000003727	-	68	88.263	ENSCPBG00000023800	-	74	96.000	Chrysemys_picta_bellii
ENSTBEG00000003727	-	68	94.836	ENSCANG00000021868	RBM4B	97	97.619	Colobus_angolensis_palliatus
ENSTBEG00000003727	-	68	94.860	ENSCGRG00001024693	Rbm4b	64	94.545	Cricetulus_griseus_chok1gshd
ENSTBEG00000003727	-	70	98.182	ENSCGRG00001016609	-	96	98.400	Cricetulus_griseus_chok1gshd
ENSTBEG00000003727	-	70	98.182	ENSCGRG00000010183	-	96	98.400	Cricetulus_griseus_crigri
ENSTBEG00000003727	-	68	94.860	ENSCGRG00000012112	Rbm4b	64	94.545	Cricetulus_griseus_crigri
ENSTBEG00000003727	-	68	94.836	ENSDNOG00000019500	-	64	94.091	Dasypus_novemcinctus
ENSTBEG00000003727	-	70	98.636	ENSDNOG00000032390	RBM4	64	98.636	Dasypus_novemcinctus
ENSTBEG00000003727	-	68	94.366	ENSDNOG00000045639	-	64	93.636	Dasypus_novemcinctus
ENSTBEG00000003727	-	68	94.836	ENSDORG00000029108	Rbm4b	65	94.091	Dipodomys_ordii
ENSTBEG00000003727	-	70	97.727	ENSDORG00000004538	-	96	97.600	Dipodomys_ordii
ENSTBEG00000003727	-	68	94.836	ENSEASG00005005068	RBM4B	64	94.091	Equus_asinus_asinus
ENSTBEG00000003727	-	70	99.545	ENSEASG00005005064	RBM4	64	99.545	Equus_asinus_asinus
ENSTBEG00000003727	-	70	99.545	ENSECAG00000022940	RBM4	64	99.545	Equus_caballus
ENSTBEG00000003727	-	68	94.836	ENSECAG00000022987	RBM4B	64	94.091	Equus_caballus
ENSTBEG00000003727	-	70	93.607	ENSEEUG00000000058	RBM4B	63	93.636	Erinaceus_europaeus
ENSTBEG00000003727	-	68	94.836	ENSFCAG00000007394	RBM4B	97	97.619	Felis_catus
ENSTBEG00000003727	-	70	99.545	ENSFCAG00000029651	RBM4	96	100.000	Felis_catus
ENSTBEG00000003727	-	69	88.073	ENSFALG00000002073	-	63	88.073	Ficedula_albicollis
ENSTBEG00000003727	-	70	98.636	ENSFDAG00000005447	RBM4	96	99.200	Fukomys_damarensis
ENSTBEG00000003727	-	68	94.836	ENSFDAG00000015530	RBM4B	64	94.091	Fukomys_damarensis
ENSTBEG00000003727	-	51	92.800	ENSFDAG00000013661	-	92	92.800	Fukomys_damarensis
ENSTBEG00000003727	-	69	88.073	ENSGALG00000037946	-	62	88.073	Gallus_gallus
ENSTBEG00000003727	-	68	88.263	ENSGAGG00000008553	-	60	88.263	Gopherus_agassizii
ENSTBEG00000003727	-	68	94.836	ENSGGOG00000011698	RBM4B	97	97.619	Gorilla_gorilla
ENSTBEG00000003727	-	70	98.636	ENSHGLG00000009991	RBM4	96	99.200	Heterocephalus_glaber_female
ENSTBEG00000003727	-	67	81.517	ENSHGLG00000002853	-	67	80.455	Heterocephalus_glaber_female
ENSTBEG00000003727	-	68	94.836	ENSHGLG00000016412	-	64	94.091	Heterocephalus_glaber_female
ENSTBEG00000003727	-	67	81.517	ENSHGLG00100020033	-	69	80.455	Heterocephalus_glaber_male
ENSTBEG00000003727	-	70	98.636	ENSHGLG00100003854	RBM4	96	99.200	Heterocephalus_glaber_male
ENSTBEG00000003727	-	68	94.836	ENSHGLG00100003978	-	64	94.091	Heterocephalus_glaber_male
ENSTBEG00000003727	-	68	94.393	ENSSTOG00000011226	RBM4B	64	94.091	Ictidomys_tridecemlineatus
ENSTBEG00000003727	-	70	100.000	ENSSTOG00000022811	RBM4	96	100.000	Ictidomys_tridecemlineatus
ENSTBEG00000003727	-	68	91.080	ENSJJAG00000020870	Rbm4b	64	90.455	Jaculus_jaculus
ENSTBEG00000003727	-	68	91.549	ENSLAFG00000002285	RBM4B	64	90.909	Loxodonta_africana
ENSTBEG00000003727	-	70	98.182	ENSLAFG00000028147	-	67	98.174	Loxodonta_africana
ENSTBEG00000003727	-	68	94.836	ENSMFAG00000033927	RBM4B	96	98.400	Macaca_fascicularis
ENSTBEG00000003727	-	68	94.836	ENSMNEG00000043371	RBM4B	97	97.619	Macaca_nemestrina
ENSTBEG00000003727	-	68	94.836	ENSMLEG00000028563	RBM4B	97	97.619	Mandrillus_leucophaeus
ENSTBEG00000003727	-	68	94.393	ENSMAUG00000017027	Rbm4b	65	94.091	Mesocricetus_auratus
ENSTBEG00000003727	-	68	94.366	ENSMICG00000003820	RBM4B	97	97.619	Microcebus_murinus
ENSTBEG00000003727	-	68	94.366	ENSMOCG00000001835	Rbm4b	64	93.636	Microtus_ochrogaster
ENSTBEG00000003727	-	68	92.488	ENSMODG00000008056	-	63	91.818	Monodelphis_domestica
ENSTBEG00000003727	-	69	60.829	MGP_CAROLIEiJ_G0022514	-	94	42.424	Mus_caroli
ENSTBEG00000003727	-	68	94.836	MGP_CAROLIEiJ_G0022515	Rbm4b	64	94.091	Mus_caroli
ENSTBEG00000003727	-	70	98.182	MGP_CAROLIEiJ_G0022516	-	96	98.400	Mus_caroli
ENSTBEG00000003727	-	68	94.393	ENSMUSG00000033760	Rbm4b	91	97.619	Mus_musculus
ENSTBEG00000003727	-	70	98.636	ENSMUSG00000094936	Rbm4	99	98.742	Mus_musculus
ENSTBEG00000003727	-	70	98.636	ENSMUSG00000096370	Gm21992	73	98.636	Mus_musculus
ENSTBEG00000003727	-	70	98.636	MGP_PahariEiJ_G0014013	-	96	98.400	Mus_pahari
ENSTBEG00000003727	-	68	94.393	MGP_PahariEiJ_G0014012	Rbm4b	64	94.091	Mus_pahari
ENSTBEG00000003727	-	70	98.636	MGP_PahariEiJ_G0014011	-	64	98.636	Mus_pahari
ENSTBEG00000003727	-	70	71.282	MGP_SPRETEiJ_G0023428	-	94	42.424	Mus_spretus
ENSTBEG00000003727	-	68	79.195	MGP_SPRETEiJ_G0023429	-	54	78.846	Mus_spretus
ENSTBEG00000003727	-	70	71.282	MGP_SPRETEiJ_G0023430	-	60	71.282	Mus_spretus
ENSTBEG00000003727	-	68	94.836	ENSMPUG00000003450	RBM4B	64	94.091	Mustela_putorius_furo
ENSTBEG00000003727	-	70	99.545	ENSMPUG00000003443	RBM4	63	99.545	Mustela_putorius_furo
ENSTBEG00000003727	-	68	94.836	ENSMLUG00000001290	RBM4B	66	94.091	Myotis_lucifugus
ENSTBEG00000003727	-	70	99.091	ENSMLUG00000004076	RBM4	61	99.091	Myotis_lucifugus
ENSTBEG00000003727	-	70	94.064	ENSNGAG00000016292	Rbm4b	64	94.091	Nannospalax_galili
ENSTBEG00000003727	-	70	100.000	ENSNLEG00000035021	RBM4	96	100.000	Nomascus_leucogenys
ENSTBEG00000003727	-	68	94.393	ENSNLEG00000006213	RBM4B	97	97.619	Nomascus_leucogenys
ENSTBEG00000003727	-	68	92.958	ENSMEUG00000001445	-	63	92.273	Notamacropus_eugenii
ENSTBEG00000003727	-	68	94.836	ENSOPRG00000009158	RBM4B	64	94.091	Ochotona_princeps
ENSTBEG00000003727	-	70	99.545	ENSOPRG00000009149	RBM4	63	99.545	Ochotona_princeps
ENSTBEG00000003727	-	68	94.836	ENSODEG00000017696	-	64	94.091	Octodon_degus
ENSTBEG00000003727	-	70	79.452	ENSODEG00000001866	-	63	79.545	Octodon_degus
ENSTBEG00000003727	-	74	89.177	ENSOANG00000011036	-	71	89.177	Ornithorhynchus_anatinus
ENSTBEG00000003727	-	65	94.146	ENSOANG00000003143	-	56	94.146	Ornithorhynchus_anatinus
ENSTBEG00000003727	-	70	100.000	ENSOCUG00000004731	RBM4	67	100.000	Oryctolagus_cuniculus
ENSTBEG00000003727	-	68	94.836	ENSOCUG00000006695	LARK	64	94.091	Oryctolagus_cuniculus
ENSTBEG00000003727	-	70	100.000	ENSOGAG00000015647	RBM4	63	100.000	Otolemur_garnettii
ENSTBEG00000003727	-	68	94.393	ENSOGAG00000015648	RBM4B	64	94.091	Otolemur_garnettii
ENSTBEG00000003727	-	68	95.305	ENSOARG00000007759	RBM4B	63	94.545	Ovis_aries
ENSTBEG00000003727	-	68	98.598	ENSOARG00000007700	RBM4	63	98.598	Ovis_aries
ENSTBEG00000003727	-	68	94.836	ENSPPAG00000015125	RBM4B	97	97.619	Pan_paniscus
ENSTBEG00000003727	-	70	99.545	ENSPPRG00000003533	RBM4	96	100.000	Panthera_pardus
ENSTBEG00000003727	-	68	94.836	ENSPPRG00000003388	RBM4B	97	97.619	Panthera_pardus
ENSTBEG00000003727	-	70	99.091	ENSPTIG00000016180	RBM4	96	99.200	Panthera_tigris_altaica
ENSTBEG00000003727	-	68	94.836	ENSPTIG00000015426	RBM4B	97	97.619	Panthera_tigris_altaica
ENSTBEG00000003727	-	68	94.836	ENSPTRG00000003935	RBM4B	97	97.619	Pan_troglodytes
ENSTBEG00000003727	-	68	94.836	ENSPANG00000020672	RBM4B	97	97.619	Papio_anubis
ENSTBEG00000003727	-	70	83.556	ENSPSIG00000003477	-	74	86.854	Pelodiscus_sinensis
ENSTBEG00000003727	-	68	87.793	ENSPSIG00000003430	-	61	87.793	Pelodiscus_sinensis
ENSTBEG00000003727	-	68	94.836	ENSPEMG00000009144	Rbm4b	64	94.091	Peromyscus_maniculatus_bairdii
ENSTBEG00000003727	-	70	98.624	ENSPPYG00000003012	RBM4	63	98.624	Pongo_abelii
ENSTBEG00000003727	-	68	94.836	ENSPPYG00000003010	RBM4B	64	94.091	Pongo_abelii
ENSTBEG00000003727	-	70	97.727	ENSPCAG00000003393	-	60	97.727	Procavia_capensis
ENSTBEG00000003727	-	68	94.366	ENSPCOG00000027885	RBM4B	97	97.619	Propithecus_coquereli
ENSTBEG00000003727	-	68	94.836	ENSPVAG00000010487	RBM4B	64	94.091	Pteropus_vampyrus
ENSTBEG00000003727	-	70	99.545	ENSPVAG00000010486	RBM4	64	99.545	Pteropus_vampyrus
ENSTBEG00000003727	-	68	94.393	ENSRNOG00000061795	Rbm4b	64	94.091	Rattus_norvegicus
ENSTBEG00000003727	-	70	98.636	ENSRNOG00000050741	Rbm4	96	98.400	Rattus_norvegicus
ENSTBEG00000003727	-	68	94.836	ENSRBIG00000019394	RBM4B	97	97.619	Rhinopithecus_bieti
ENSTBEG00000003727	-	68	94.836	ENSRROG00000032850	RBM4B	97	97.619	Rhinopithecus_roxellana
ENSTBEG00000003727	-	68	93.925	ENSSBOG00000034474	RBM4B	97	96.825	Saimiri_boliviensis_boliviensis
ENSTBEG00000003727	-	68	95.305	ENSSHAG00000008386	-	67	94.545	Sarcophilus_harrisii
ENSTBEG00000003727	-	68	95.305	ENSSARG00000010710	RBM4B	64	94.545	Sorex_araneus
ENSTBEG00000003727	-	70	99.545	ENSSSCG00000032437	RBM4	63	99.545	Sus_scrofa
ENSTBEG00000003727	-	69	86.697	ENSTGUG00000016779	-	75	86.697	Taeniopygia_guttata
ENSTBEG00000003727	-	70	98.636	ENSTTRG00000011164	RBM4	64	98.636	Tursiops_truncatus
ENSTBEG00000003727	-	68	94.366	ENSTTRG00000011166	RBM4B	64	93.636	Tursiops_truncatus
ENSTBEG00000003727	-	70	99.545	ENSUAMG00000014882	RBM4	96	100.000	Ursus_americanus
ENSTBEG00000003727	-	68	94.836	ENSUAMG00000004745	RBM4B	64	94.091	Ursus_americanus
ENSTBEG00000003727	-	100	81.871	ENSUMAG00000011738	-	96	99.200	Ursus_maritimus
ENSTBEG00000003727	-	68	99.070	ENSVPAG00000001949	RBM4	64	99.070	Vicugna_pacos
ENSTBEG00000003727	-	68	94.836	ENSVPAG00000001950	RBM4B	64	94.091	Vicugna_pacos
ENSTBEG00000003727	-	68	94.836	ENSVVUG00000010619	RBM4B	64	94.091	Vulpes_vulpes
ENSTBEG00000003727	-	70	98.636	ENSVVUG00000010622	RBM4	63	98.636	Vulpes_vulpes