EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTBEG00000003999 (Gene tree)
Gene ID: -
Gene Symbol: SND1
Alias: TDRD11|p100
Full Name: staphylococcal nuclease and tudor domain containing 1
Gene Type: protein_coding
Species: Tupaia_belangeri
Status: putative
Strand: Plus strand
Length: 470311 bases
Position: chrGeneScaffold_5454:52819-523129
Accession: 30646
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTBEP00000003478	TUDOR	PF00567.24	2.9e-28	1	1
ENSTBEP00000003478	SNase	PF00565.17	3e-61	1	4
ENSTBEP00000003478	SNase	PF00565.17	3e-61	2	4
ENSTBEP00000003478	SNase	PF00565.17	3e-61	3	4
ENSTBEP00000003478	SNase	PF00565.17	3e-61	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTBET00000004010	SND1-201	2544	-	ENSTBEP00000003478	848 (aa)	-	UPI0000F606A6

Gene Model

Click here to download ENSTBEG00000003999's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTBEG00000003999's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTBEG00000003999	SND1	100	93.042	ENSG00000197157	SND1	93	93.042	Homo_sapiens
ENSTBEG00000003999	SND1	100	79.176	ENSAPOG00000017599	snd1	93	79.176	Acanthochromis_polyacanthus
ENSTBEG00000003999	SND1	100	92.824	ENSAMEG00000004664	SND1	88	92.824	Ailuropoda_melanoleuca
ENSTBEG00000003999	SND1	100	76.090	ENSACIG00000003551	snd1	93	76.090	Amphilophus_citrinellus
ENSTBEG00000003999	SND1	100	78.941	ENSAOCG00000014166	snd1	93	78.941	Amphiprion_ocellaris
ENSTBEG00000003999	SND1	100	78.941	ENSAPEG00000007067	snd1	93	78.941	Amphiprion_percula
ENSTBEG00000003999	SND1	100	78.824	ENSATEG00000018475	snd1	85	78.824	Anabas_testudineus
ENSTBEG00000003999	SND1	100	93.160	ENSANAG00000034463	SND1	95	93.160	Aotus_nancymaae
ENSTBEG00000003999	SND1	100	78.588	ENSACLG00000022897	snd1	93	78.588	Astatotilapia_calliptera
ENSTBEG00000003999	SND1	100	79.225	ENSAMXG00000016318	snd1	95	79.225	Astyanax_mexicanus
ENSTBEG00000003999	SND1	100	92.689	ENSBTAG00000010692	SND1	93	92.689	Bos_taurus
ENSTBEG00000003999	SND1	100	43.284	WBGene00006626	tsn-1	94	43.578	Caenorhabditis_elegans
ENSTBEG00000003999	SND1	100	92.925	ENSCJAG00000017668	SND1	95	92.925	Callithrix_jacchus
ENSTBEG00000003999	SND1	100	93.278	ENSCAFG00000001700	SND1	93	93.278	Canis_familiaris
ENSTBEG00000003999	SND1	100	93.278	ENSCAFG00020021639	SND1	93	93.278	Canis_lupus_dingo
ENSTBEG00000003999	SND1	100	93.042	ENSCHIG00000023390	SND1	94	93.042	Capra_hircus
ENSTBEG00000003999	SND1	67	90.493	ENSTSYG00000004979	SND1	96	90.493	Carlito_syrichta
ENSTBEG00000003999	SND1	100	79.176	ENSCAPG00000010677	SND1	93	79.176	Cavia_aperea
ENSTBEG00000003999	SND1	100	92.217	ENSCPOG00000006251	SND1	93	92.217	Cavia_porcellus
ENSTBEG00000003999	SND1	100	93.278	ENSCCAG00000036847	SND1	94	93.278	Cebus_capucinus
ENSTBEG00000003999	SND1	100	93.160	ENSCATG00000035214	SND1	96	93.160	Cercocebus_atys
ENSTBEG00000003999	SND1	100	92.571	ENSCLAG00000011796	SND1	93	92.571	Chinchilla_lanigera
ENSTBEG00000003999	SND1	100	93.160	ENSCSAG00000010182	SND1	93	93.160	Chlorocebus_sabaeus
ENSTBEG00000003999	SND1	79	91.176	ENSCHOG00000002218	SND1	86	91.176	Choloepus_hoffmanni
ENSTBEG00000003999	SND1	100	87.382	ENSCPBG00000018094	SND1	93	87.382	Chrysemys_picta_bellii
ENSTBEG00000003999	SND1	100	51.916	ENSCING00000000524	-	93	51.916	Ciona_intestinalis
ENSTBEG00000003999	SND1	100	53.396	ENSCSAVG00000008807	-	93	53.396	Ciona_savignyi
ENSTBEG00000003999	SND1	100	93.160	ENSCANG00000035119	SND1	93	93.160	Colobus_angolensis_palliatus
ENSTBEG00000003999	SND1	100	91.745	ENSCGRG00001022514	Snd1	96	91.745	Cricetulus_griseus_chok1gshd
ENSTBEG00000003999	SND1	100	91.745	ENSCGRG00000012277	Snd1	96	91.745	Cricetulus_griseus_crigri
ENSTBEG00000003999	SND1	100	78.706	ENSCSEG00000008661	snd1	96	78.706	Cynoglossus_semilaevis
ENSTBEG00000003999	SND1	100	79.529	ENSCVAG00000010316	snd1	96	79.137	Cyprinodon_variegatus
ENSTBEG00000003999	SND1	100	80.141	ENSDARG00000006766	snd1	93	88.272	Danio_rerio
ENSTBEG00000003999	SND1	100	90.235	ENSDNOG00000006795	SND1	96	90.235	Dasypus_novemcinctus
ENSTBEG00000003999	SND1	100	93.278	ENSDORG00000000336	Snd1	93	93.278	Dipodomys_ordii
ENSTBEG00000003999	SND1	100	47.440	FBgn0035121	Tudor-SN	93	47.440	Drosophila_melanogaster
ENSTBEG00000003999	SND1	92	70.769	ENSETEG00000000375	SND1	88	70.769	Echinops_telfairi
ENSTBEG00000003999	SND1	65	55.405	ENSEBUG00000014201	-	84	75.956	Eptatretus_burgeri
ENSTBEG00000003999	SND1	100	93.278	ENSEASG00005008513	SND1	93	91.551	Equus_asinus_asinus
ENSTBEG00000003999	SND1	100	93.160	ENSECAG00000011451	SND1	93	93.160	Equus_caballus
ENSTBEG00000003999	SND1	100	83.491	ENSEEUG00000014737	SND1	93	83.491	Erinaceus_europaeus
ENSTBEG00000003999	SND1	100	77.817	ENSELUG00000001805	snd1	90	77.817	Esox_lucius
ENSTBEG00000003999	SND1	100	93.278	ENSFCAG00000008289	SND1	93	93.278	Felis_catus
ENSTBEG00000003999	SND1	100	92.807	ENSFDAG00000015881	SND1	93	92.807	Fukomys_damarensis
ENSTBEG00000003999	SND1	100	79.176	ENSFHEG00000004093	snd1	96	79.176	Fundulus_heteroclitus
ENSTBEG00000003999	SND1	61	73.502	ENSGMOG00000018932	snd1	59	73.502	Gadus_morhua
ENSTBEG00000003999	SND1	100	79.529	ENSGAFG00000008421	snd1	96	79.529	Gambusia_affinis
ENSTBEG00000003999	SND1	90	76.025	ENSGACG00000019793	snd1	85	76.025	Gasterosteus_aculeatus
ENSTBEG00000003999	SND1	100	93.160	ENSGGOG00000009614	SND1	95	93.160	Gorilla_gorilla
ENSTBEG00000003999	SND1	100	78.588	ENSHBUG00000019135	snd1	94	78.588	Haplochromis_burtoni
ENSTBEG00000003999	SND1	100	92.571	ENSHGLG00000003618	SND1	93	92.571	Heterocephalus_glaber_female
ENSTBEG00000003999	SND1	100	92.571	ENSHGLG00100012449	SND1	94	92.571	Heterocephalus_glaber_male
ENSTBEG00000003999	SND1	100	78.471	ENSHCOG00000005266	snd1	93	78.471	Hippocampus_comes
ENSTBEG00000003999	SND1	100	78.052	ENSIPUG00000013279	snd1	93	78.052	Ictalurus_punctatus
ENSTBEG00000003999	SND1	100	93.278	ENSSTOG00000002140	SND1	93	93.278	Ictidomys_tridecemlineatus
ENSTBEG00000003999	SND1	100	93.042	ENSJJAG00000009561	Snd1	93	93.042	Jaculus_jaculus
ENSTBEG00000003999	SND1	100	79.176	ENSKMAG00000016997	snd1	93	79.176	Kryptolebias_marmoratus
ENSTBEG00000003999	SND1	100	77.882	ENSLBEG00000013563	snd1	95	77.882	Labrus_bergylta
ENSTBEG00000003999	SND1	100	79.837	ENSLOCG00000015537	snd1	93	79.837	Lepisosteus_oculatus
ENSTBEG00000003999	SND1	100	92.335	ENSLAFG00000009696	SND1	93	92.335	Loxodonta_africana
ENSTBEG00000003999	SND1	100	93.160	ENSMFAG00000038114	SND1	96	93.160	Macaca_fascicularis
ENSTBEG00000003999	SND1	100	93.160	ENSMMUG00000015432	SND1	93	93.160	Macaca_mulatta
ENSTBEG00000003999	SND1	100	93.160	ENSMNEG00000039808	SND1	96	93.160	Macaca_nemestrina
ENSTBEG00000003999	SND1	100	93.042	ENSMLEG00000029040	SND1	96	93.042	Mandrillus_leucophaeus
ENSTBEG00000003999	SND1	100	78.706	ENSMAMG00000011739	snd1	93	78.706	Mastacembelus_armatus
ENSTBEG00000003999	SND1	100	78.588	ENSMZEG00005005681	snd1	95	78.588	Maylandia_zebra
ENSTBEG00000003999	SND1	100	93.396	ENSMICG00000000097	SND1	93	93.396	Microcebus_murinus
ENSTBEG00000003999	SND1	100	92.335	ENSMOCG00000005040	Snd1	93	92.335	Microtus_ochrogaster
ENSTBEG00000003999	SND1	100	78.706	ENSMMOG00000001795	snd1	93	78.706	Mola_mola
ENSTBEG00000003999	SND1	100	89.858	ENSMODG00000015182	SND1	93	89.858	Monodelphis_domestica
ENSTBEG00000003999	SND1	100	78.000	ENSMALG00000012071	snd1	95	78.000	Monopterus_albus
ENSTBEG00000003999	SND1	100	92.099	MGP_CAROLIEiJ_G0028159	Snd1	93	92.099	Mus_caroli
ENSTBEG00000003999	SND1	100	92.099	ENSMUSG00000001424	Snd1	93	92.099	Mus_musculus
ENSTBEG00000003999	SND1	100	92.099	MGP_PahariEiJ_G0021917	Snd1	96	89.594	Mus_pahari
ENSTBEG00000003999	SND1	100	92.099	MGP_SPRETEiJ_G0029159	Snd1	93	92.099	Mus_spretus
ENSTBEG00000003999	SND1	100	93.042	ENSMPUG00000006545	SND1	93	93.042	Mustela_putorius_furo
ENSTBEG00000003999	SND1	100	91.502	ENSMLUG00000017130	SND1	96	91.502	Myotis_lucifugus
ENSTBEG00000003999	SND1	100	92.335	ENSNGAG00000011186	Snd1	93	92.335	Nannospalax_galili
ENSTBEG00000003999	SND1	100	78.471	ENSNBRG00000006681	snd1	93	78.471	Neolamprologus_brichardi
ENSTBEG00000003999	SND1	100	93.160	ENSNLEG00000012263	SND1	96	93.160	Nomascus_leucogenys
ENSTBEG00000003999	SND1	92	94.359	ENSOPRG00000013405	SND1	86	94.359	Ochotona_princeps
ENSTBEG00000003999	SND1	100	92.807	ENSODEG00000011502	SND1	93	92.807	Octodon_degus
ENSTBEG00000003999	SND1	100	78.471	ENSONIG00000011481	snd1	91	78.471	Oreochromis_niloticus
ENSTBEG00000003999	SND1	100	88.443	ENSOANG00000000817	SND1	93	88.443	Ornithorhynchus_anatinus
ENSTBEG00000003999	SND1	100	91.627	ENSOCUG00000001620	SND1	93	91.627	Oryctolagus_cuniculus
ENSTBEG00000003999	SND1	100	78.588	ENSORLG00000015201	snd1	95	78.588	Oryzias_latipes
ENSTBEG00000003999	SND1	100	78.706	ENSORLG00020013991	snd1	95	78.706	Oryzias_latipes_hni
ENSTBEG00000003999	SND1	100	78.706	ENSORLG00015012436	snd1	93	78.706	Oryzias_latipes_hsok
ENSTBEG00000003999	SND1	100	78.706	ENSOMEG00000006406	snd1	93	78.706	Oryzias_melastigma
ENSTBEG00000003999	SND1	100	92.941	ENSOGAG00000013356	SND1	88	92.941	Otolemur_garnettii
ENSTBEG00000003999	SND1	100	90.094	ENSOARG00000002149	SND1	96	90.094	Ovis_aries
ENSTBEG00000003999	SND1	100	93.042	ENSPPAG00000042947	SND1	95	93.042	Pan_paniscus
ENSTBEG00000003999	SND1	100	93.278	ENSPPRG00000004494	SND1	93	93.278	Panthera_pardus
ENSTBEG00000003999	SND1	100	93.160	ENSPTIG00000014214	SND1	94	93.160	Panthera_tigris_altaica
ENSTBEG00000003999	SND1	100	93.042	ENSPTRG00000023911	SND1	95	93.042	Pan_troglodytes
ENSTBEG00000003999	SND1	100	93.160	ENSPANG00000011997	SND1	96	93.160	Papio_anubis
ENSTBEG00000003999	SND1	100	76.429	ENSPKIG00000023494	snd1	93	76.429	Paramormyrops_kingsleyae
ENSTBEG00000003999	SND1	98	77.311	ENSPMGG00000003629	snd1	99	77.311	Periophthalmus_magnuspinnatus
ENSTBEG00000003999	SND1	100	92.453	ENSPEMG00000010240	Snd1	93	92.453	Peromyscus_maniculatus_bairdii
ENSTBEG00000003999	SND1	100	70.188	ENSPMAG00000007915	-	96	70.188	Petromyzon_marinus
ENSTBEG00000003999	SND1	100	90.448	ENSPCIG00000011561	SND1	93	90.448	Phascolarctos_cinereus
ENSTBEG00000003999	SND1	100	78.941	ENSPFOG00000001557	snd1	93	78.941	Poecilia_formosa
ENSTBEG00000003999	SND1	100	79.059	ENSPLAG00000018459	snd1	91	79.059	Poecilia_latipinna
ENSTBEG00000003999	SND1	100	79.412	ENSPMEG00000006803	snd1	93	79.412	Poecilia_mexicana
ENSTBEG00000003999	SND1	100	79.294	ENSPREG00000002189	snd1	94	79.294	Poecilia_reticulata
ENSTBEG00000003999	SND1	92	92.564	ENSPPYG00000017972	SND1	93	92.564	Pongo_abelii
ENSTBEG00000003999	SND1	100	91.392	ENSPCAG00000011305	SND1	93	91.392	Procavia_capensis
ENSTBEG00000003999	SND1	100	93.160	ENSPCOG00000026791	SND1	96	93.160	Propithecus_coquereli
ENSTBEG00000003999	SND1	100	93.750	ENSPVAG00000013945	SND1	93	93.750	Pteropus_vampyrus
ENSTBEG00000003999	SND1	100	78.588	ENSPNYG00000000932	snd1	93	78.588	Pundamilia_nyererei
ENSTBEG00000003999	SND1	100	78.756	ENSPNAG00000001206	snd1	93	78.756	Pygocentrus_nattereri
ENSTBEG00000003999	SND1	100	91.863	ENSRNOG00000031173	Snd1	96	90.448	Rattus_norvegicus
ENSTBEG00000003999	SND1	57	99.379	ENSRBIG00000027782	-	93	99.372	Rhinopithecus_bieti
ENSTBEG00000003999	SND1	100	93.160	ENSRROG00000033020	SND1	93	93.160	Rhinopithecus_roxellana
ENSTBEG00000003999	SND1	100	93.160	ENSSBOG00000032461	SND1	95	93.160	Saimiri_boliviensis_boliviensis
ENSTBEG00000003999	SND1	100	87.146	ENSSHAG00000015359	SND1	95	87.146	Sarcophilus_harrisii
ENSTBEG00000003999	SND1	100	78.413	ENSSFOG00015001103	snd1	93	78.413	Scleropages_formosus
ENSTBEG00000003999	SND1	100	78.000	ENSSMAG00000001932	snd1	88	78.000	Scophthalmus_maximus
ENSTBEG00000003999	SND1	100	78.824	ENSSDUG00000002699	snd1	87	78.824	Seriola_dumerili
ENSTBEG00000003999	SND1	100	76.028	ENSSLDG00000001950	snd1	93	76.028	Seriola_lalandi_dorsalis
ENSTBEG00000003999	SND1	92	98.113	ENSSARG00000004877	SND1	92	98.113	Sorex_araneus
ENSTBEG00000003999	SND1	61	100.000	ENSSPUG00000017586	SND1	97	100.000	Sphenodon_punctatus
ENSTBEG00000003999	SND1	67	78.584	ENSSPAG00000021398	snd1	94	78.584	Stegastes_partitus
ENSTBEG00000003999	SND1	100	92.807	ENSSSCG00000016590	SND1	93	92.807	Sus_scrofa
ENSTBEG00000003999	SND1	100	84.314	ENSTRUG00000014067	snd1	93	78.000	Takifugu_rubripes
ENSTBEG00000003999	SND1	100	78.824	ENSTNIG00000011019	snd1	94	79.335	Tetraodon_nigroviridis
ENSTBEG00000003999	SND1	100	87.972	ENSTTRG00000006059	SND1	93	87.972	Tursiops_truncatus
ENSTBEG00000003999	SND1	93	88.776	ENSUAMG00000005604	-	87	88.776	Ursus_americanus
ENSTBEG00000003999	SND1	58	89.415	ENSUAMG00000002820	-	83	89.415	Ursus_americanus
ENSTBEG00000003999	SND1	100	93.160	ENSUMAG00000005960	SND1	93	93.160	Ursus_maritimus
ENSTBEG00000003999	SND1	74	93.443	ENSVPAG00000008302	SND1	70	93.443	Vicugna_pacos
ENSTBEG00000003999	SND1	100	93.042	ENSVVUG00000007226	SND1	93	93.042	Vulpes_vulpes
ENSTBEG00000003999	SND1	100	80.471	ENSXETG00000023043	snd1	98	79.439	Xenopus_tropicalis
ENSTBEG00000003999	SND1	98	76.591	ENSXCOG00000013629	snd1	98	76.591	Xiphophorus_couchianus
ENSTBEG00000003999	SND1	100	79.529	ENSXMAG00000011469	snd1	93	79.529	Xiphophorus_maculatus