EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTBEG00000004418 (Gene tree)
Gene ID: -
Gene Symbol: RTCB
Alias: C22orf28|FAAP|HSPC117
Full Name: RNA 2'%2C3'-cyclic phosphate and 5'-OH ligase
Gene Type: protein_coding
Species: Tupaia_belangeri
Status: putative
Strand: Minus strand
Length: 44275 bases
Position: chrGeneScaffold_1327:5878-50152
Accession: 26935
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTBEP00000003808	RtcB	PF01139.17	2.2e-118	1	2
ENSTBEP00000003808	RtcB	PF01139.17	2.2e-118	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTBET00000004412	RTCB-201	1512	-	ENSTBEP00000003808	503 (aa)	-	UPI0000F60A31

Gene Model

Click here to download ENSTBEG00000004418's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTBEG00000004418's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTBEG00000004418	RTCB	100	86.139	ENSG00000100220	RTCB	100	86.139	Homo_sapiens
ENSTBEG00000004418	RTCB	100	81.782	ENSAPOG00000006040	rtcb	100	81.782	Acanthochromis_polyacanthus
ENSTBEG00000004418	RTCB	100	85.941	ENSAMEG00000016152	RTCB	100	85.941	Ailuropoda_melanoleuca
ENSTBEG00000004418	RTCB	100	78.175	ENSACIG00000009083	rtcb	100	78.175	Amphilophus_citrinellus
ENSTBEG00000004418	RTCB	100	81.980	ENSAOCG00000005662	rtcb	97	86.130	Amphiprion_ocellaris
ENSTBEG00000004418	RTCB	100	81.980	ENSAPEG00000024701	rtcb	100	81.980	Amphiprion_percula
ENSTBEG00000004418	RTCB	88	81.879	ENSAPEG00000024653	rtcb	92	81.879	Amphiprion_percula
ENSTBEG00000004418	RTCB	100	81.386	ENSATEG00000000618	rtcb	100	81.386	Anabas_testudineus
ENSTBEG00000004418	RTCB	100	81.503	ENSACAG00000014817	RTCB	100	81.503	Anolis_carolinensis
ENSTBEG00000004418	RTCB	72	97.222	ENSANAG00000023724	-	84	97.222	Aotus_nancymaae
ENSTBEG00000004418	RTCB	100	73.861	ENSANAG00000018191	-	91	73.861	Aotus_nancymaae
ENSTBEG00000004418	RTCB	100	80.396	ENSACLG00000008367	rtcb	97	84.787	Astatotilapia_calliptera
ENSTBEG00000004418	RTCB	100	81.386	ENSAMXG00000042320	rtcb	100	81.386	Astyanax_mexicanus
ENSTBEG00000004418	RTCB	100	85.941	ENSBTAG00000011070	RTCB	100	85.941	Bos_taurus
ENSTBEG00000004418	RTCB	100	62.772	WBGene00008877	rtcb-1	100	62.772	Caenorhabditis_elegans
ENSTBEG00000004418	RTCB	100	85.743	ENSCJAG00000006128	RTCB	100	85.743	Callithrix_jacchus
ENSTBEG00000004418	RTCB	100	85.941	ENSCAFG00000001785	RTCB	100	85.941	Canis_familiaris
ENSTBEG00000004418	RTCB	100	82.970	ENSCAFG00000010789	-	100	82.970	Canis_familiaris
ENSTBEG00000004418	RTCB	100	85.941	ENSCAFG00020004890	-	100	85.941	Canis_lupus_dingo
ENSTBEG00000004418	RTCB	87	81.818	ENSCAFG00020018953	-	99	81.818	Canis_lupus_dingo
ENSTBEG00000004418	RTCB	100	86.139	ENSCHIG00000027009	-	100	86.139	Capra_hircus
ENSTBEG00000004418	RTCB	100	85.743	ENSTSYG00000012320	RTCB	100	85.743	Carlito_syrichta
ENSTBEG00000004418	RTCB	88	90.380	ENSCAPG00000011647	RTCB	90	90.380	Cavia_aperea
ENSTBEG00000004418	RTCB	100	85.743	ENSCCAG00000000618	RTCB	100	85.743	Cebus_capucinus
ENSTBEG00000004418	RTCB	100	85.743	ENSCATG00000033424	RTCB	100	85.743	Cercocebus_atys
ENSTBEG00000004418	RTCB	100	85.743	ENSCLAG00000007997	RTCB	100	85.743	Chinchilla_lanigera
ENSTBEG00000004418	RTCB	100	85.545	ENSCSAG00000008351	RTCB	100	85.545	Chlorocebus_sabaeus
ENSTBEG00000004418	RTCB	100	71.485	ENSCHOG00000009123	RTCB	100	71.485	Choloepus_hoffmanni
ENSTBEG00000004418	RTCB	100	83.564	ENSCPBG00000023184	RTCB	100	83.564	Chrysemys_picta_bellii
ENSTBEG00000004418	RTCB	100	70.891	ENSCING00000003830	-	100	70.891	Ciona_intestinalis
ENSTBEG00000004418	RTCB	100	71.089	ENSCSAVG00000008124	-	99	72.477	Ciona_savignyi
ENSTBEG00000004418	RTCB	100	81.980	ENSCANG00000001891	RTCB	100	81.980	Colobus_angolensis_palliatus
ENSTBEG00000004418	RTCB	100	85.941	ENSCGRG00001011173	Rtcb	100	85.941	Cricetulus_griseus_chok1gshd
ENSTBEG00000004418	RTCB	88	90.380	ENSCGRG00000009587	-	91	90.380	Cricetulus_griseus_crigri
ENSTBEG00000004418	RTCB	100	80.792	ENSCSEG00000003986	rtcb	100	80.792	Cynoglossus_semilaevis
ENSTBEG00000004418	RTCB	82	83.413	ENSCVAG00000000569	rtcb	95	83.413	Cyprinodon_variegatus
ENSTBEG00000004418	RTCB	100	80.990	ENSDARG00000101047	rtcb	100	80.990	Danio_rerio
ENSTBEG00000004418	RTCB	78	91.094	ENSDNOG00000012425	RTCB	96	91.094	Dasypus_novemcinctus
ENSTBEG00000004418	RTCB	100	85.545	ENSDORG00000010855	Rtcb	100	85.545	Dipodomys_ordii
ENSTBEG00000004418	RTCB	99	74.354	FBgn0032781	RtcB	99	74.354	Drosophila_melanogaster
ENSTBEG00000004418	RTCB	87	100.000	ENSETEG00000001988	RTCB	87	100.000	Echinops_telfairi
ENSTBEG00000004418	RTCB	100	73.069	ENSEBUG00000014235	rtcb	100	73.069	Eptatretus_burgeri
ENSTBEG00000004418	RTCB	100	86.337	ENSEASG00005019059	RTCB	100	86.337	Equus_asinus_asinus
ENSTBEG00000004418	RTCB	100	86.337	ENSECAG00000023998	RTCB	100	86.337	Equus_caballus
ENSTBEG00000004418	RTCB	73	97.910	ENSEEUG00000006251	RTCB	83	97.910	Erinaceus_europaeus
ENSTBEG00000004418	RTCB	100	70.699	ENSELUG00000009275	rtcb	100	70.699	Esox_lucius
ENSTBEG00000004418	RTCB	100	86.139	ENSFCAG00000026480	RTCB	100	86.139	Felis_catus
ENSTBEG00000004418	RTCB	100	84.554	ENSFALG00000013334	RTCB	100	84.554	Ficedula_albicollis
ENSTBEG00000004418	RTCB	100	85.941	ENSFDAG00000018150	RTCB	100	85.941	Fukomys_damarensis
ENSTBEG00000004418	RTCB	100	80.990	ENSFHEG00000009595	rtcb	100	80.990	Fundulus_heteroclitus
ENSTBEG00000004418	RTCB	100	79.010	ENSGMOG00000018882	rtcb	100	79.010	Gadus_morhua
ENSTBEG00000004418	RTCB	100	84.554	ENSGALG00000012611	RTCB	100	84.554	Gallus_gallus
ENSTBEG00000004418	RTCB	100	81.782	ENSGAFG00000004198	rtcb	100	81.782	Gambusia_affinis
ENSTBEG00000004418	RTCB	100	80.792	ENSGACG00000000586	rtcb	100	80.792	Gasterosteus_aculeatus
ENSTBEG00000004418	RTCB	93	81.915	ENSGAGG00000019133	RTCB	98	81.915	Gopherus_agassizii
ENSTBEG00000004418	RTCB	100	86.139	ENSGGOG00000011402	RTCB	100	86.139	Gorilla_gorilla
ENSTBEG00000004418	RTCB	100	80.396	ENSHBUG00000020571	rtcb	100	80.396	Haplochromis_burtoni
ENSTBEG00000004418	RTCB	100	85.941	ENSHGLG00000004492	RTCB	100	85.941	Heterocephalus_glaber_female
ENSTBEG00000004418	RTCB	88	68.161	ENSHGLG00000001066	-	95	68.161	Heterocephalus_glaber_female
ENSTBEG00000004418	RTCB	100	85.941	ENSHGLG00100008965	RTCB	100	85.941	Heterocephalus_glaber_male
ENSTBEG00000004418	RTCB	100	79.290	ENSHCOG00000006450	rtcb	100	79.290	Hippocampus_comes
ENSTBEG00000004418	RTCB	100	81.782	ENSIPUG00000015443	rtcb	100	81.782	Ictalurus_punctatus
ENSTBEG00000004418	RTCB	100	85.941	ENSSTOG00000003878	RTCB	100	85.941	Ictidomys_tridecemlineatus
ENSTBEG00000004418	RTCB	100	85.545	ENSJJAG00000010667	Rtcb	100	85.545	Jaculus_jaculus
ENSTBEG00000004418	RTCB	100	81.188	ENSKMAG00000013178	rtcb	100	81.188	Kryptolebias_marmoratus
ENSTBEG00000004418	RTCB	100	80.396	ENSLBEG00000000214	rtcb	100	80.396	Labrus_bergylta
ENSTBEG00000004418	RTCB	100	81.386	ENSLBEG00000010566	RTCB	100	81.386	Labrus_bergylta
ENSTBEG00000004418	RTCB	100	82.178	ENSLACG00000013033	RTCB	100	82.178	Latimeria_chalumnae
ENSTBEG00000004418	RTCB	100	81.584	ENSLOCG00000016515	rtcb	99	81.584	Lepisosteus_oculatus
ENSTBEG00000004418	RTCB	100	85.545	ENSLAFG00000002082	RTCB	100	85.545	Loxodonta_africana
ENSTBEG00000004418	RTCB	100	85.545	ENSMFAG00000034419	RTCB	100	85.545	Macaca_fascicularis
ENSTBEG00000004418	RTCB	100	85.545	ENSMMUG00000006720	RTCB	100	85.545	Macaca_mulatta
ENSTBEG00000004418	RTCB	100	85.545	ENSMNEG00000040669	RTCB	100	85.545	Macaca_nemestrina
ENSTBEG00000004418	RTCB	100	85.743	ENSMLEG00000040505	RTCB	100	85.743	Mandrillus_leucophaeus
ENSTBEG00000004418	RTCB	100	81.782	ENSMAMG00000020676	rtcb	100	81.782	Mastacembelus_armatus
ENSTBEG00000004418	RTCB	100	80.396	ENSMZEG00005018942	rtcb	100	80.396	Maylandia_zebra
ENSTBEG00000004418	RTCB	100	84.221	ENSMGAG00000012805	RTCB	100	84.221	Meleagris_gallopavo
ENSTBEG00000004418	RTCB	100	85.941	ENSMICG00000013303	-	100	85.941	Microcebus_murinus
ENSTBEG00000004418	RTCB	100	68.254	ENSMICG00000036677	-	100	68.254	Microcebus_murinus
ENSTBEG00000004418	RTCB	100	85.941	ENSMOCG00000002440	Rtcb	100	85.941	Microtus_ochrogaster
ENSTBEG00000004418	RTCB	100	81.782	ENSMMOG00000005987	rtcb	100	81.782	Mola_mola
ENSTBEG00000004418	RTCB	100	85.149	ENSMODG00000001414	RTCB	100	85.149	Monodelphis_domestica
ENSTBEG00000004418	RTCB	100	81.386	ENSMALG00000007603	rtcb	100	81.386	Monopterus_albus
ENSTBEG00000004418	RTCB	100	85.941	MGP_CAROLIEiJ_G0015689	Rtcb	100	85.941	Mus_caroli
ENSTBEG00000004418	RTCB	100	85.941	ENSMUSG00000001783	Rtcb	100	85.941	Mus_musculus
ENSTBEG00000004418	RTCB	100	85.941	MGP_PahariEiJ_G0031396	Rtcb	100	85.941	Mus_pahari
ENSTBEG00000004418	RTCB	100	85.941	MGP_SPRETEiJ_G0016507	Rtcb	100	85.941	Mus_spretus
ENSTBEG00000004418	RTCB	100	85.941	ENSMPUG00000012285	RTCB	100	85.941	Mustela_putorius_furo
ENSTBEG00000004418	RTCB	100	84.813	ENSMLUG00000007803	RTCB	100	84.813	Myotis_lucifugus
ENSTBEG00000004418	RTCB	72	100.000	ENSNGAG00000005093	Rtcb	100	100.000	Nannospalax_galili
ENSTBEG00000004418	RTCB	100	80.396	ENSNBRG00000017202	rtcb	100	80.396	Neolamprologus_brichardi
ENSTBEG00000004418	RTCB	100	86.139	ENSNLEG00000004960	RTCB	100	86.139	Nomascus_leucogenys
ENSTBEG00000004418	RTCB	64	100.000	ENSMEUG00000007809	-	64	100.000	Notamacropus_eugenii
ENSTBEG00000004418	RTCB	73	100.000	ENSOPRG00000003488	RTCB	79	100.000	Ochotona_princeps
ENSTBEG00000004418	RTCB	70	100.000	ENSODEG00000013033	-	92	100.000	Octodon_degus
ENSTBEG00000004418	RTCB	100	54.762	ENSODEG00000005042	-	100	54.762	Octodon_degus
ENSTBEG00000004418	RTCB	100	81.386	ENSONIG00000007474	rtcb	100	81.386	Oreochromis_niloticus
ENSTBEG00000004418	RTCB	100	85.149	ENSOANG00000005524	RTCB	100	85.149	Ornithorhynchus_anatinus
ENSTBEG00000004418	RTCB	93	85.106	ENSOCUG00000008270	RTCB	96	85.106	Oryctolagus_cuniculus
ENSTBEG00000004418	RTCB	100	80.792	ENSORLG00000020093	rtcb	100	80.792	Oryzias_latipes
ENSTBEG00000004418	RTCB	100	80.990	ENSORLG00020003706	rtcb	100	80.990	Oryzias_latipes_hni
ENSTBEG00000004418	RTCB	100	80.990	ENSORLG00015002968	rtcb	100	80.990	Oryzias_latipes_hsok
ENSTBEG00000004418	RTCB	100	80.594	ENSOMEG00000021278	rtcb	100	80.594	Oryzias_melastigma
ENSTBEG00000004418	RTCB	100	85.347	ENSOGAG00000001425	RTCB	100	85.347	Otolemur_garnettii
ENSTBEG00000004418	RTCB	100	86.139	ENSOARG00000018008	RTCB	100	86.139	Ovis_aries
ENSTBEG00000004418	RTCB	100	86.139	ENSPPAG00000028667	RTCB	100	86.139	Pan_paniscus
ENSTBEG00000004418	RTCB	100	86.139	ENSPPRG00000004038	RTCB	100	86.139	Panthera_pardus
ENSTBEG00000004418	RTCB	88	85.682	ENSPTIG00000020499	RTCB	92	86.801	Panthera_tigris_altaica
ENSTBEG00000004418	RTCB	100	86.139	ENSPTRG00000014287	RTCB	100	86.139	Pan_troglodytes
ENSTBEG00000004418	RTCB	100	85.545	ENSPANG00000016035	RTCB	100	85.545	Papio_anubis
ENSTBEG00000004418	RTCB	100	80.000	ENSPKIG00000001881	rtcb	100	80.000	Paramormyrops_kingsleyae
ENSTBEG00000004418	RTCB	88	88.789	ENSPSIG00000011690	RTCB	97	88.789	Pelodiscus_sinensis
ENSTBEG00000004418	RTCB	100	82.178	ENSPMGG00000016672	rtcb	100	82.178	Periophthalmus_magnuspinnatus
ENSTBEG00000004418	RTCB	100	85.941	ENSPEMG00000019548	Rtcb	100	85.941	Peromyscus_maniculatus_bairdii
ENSTBEG00000004418	RTCB	100	79.406	ENSPMAG00000005657	rtcb	100	79.406	Petromyzon_marinus
ENSTBEG00000004418	RTCB	100	85.545	ENSPCIG00000009467	RTCB	100	85.545	Phascolarctos_cinereus
ENSTBEG00000004418	RTCB	100	81.782	ENSPFOG00000003058	rtcb	100	81.782	Poecilia_formosa
ENSTBEG00000004418	RTCB	100	81.584	ENSPLAG00000017663	rtcb	100	81.584	Poecilia_latipinna
ENSTBEG00000004418	RTCB	100	81.782	ENSPMEG00000006227	rtcb	100	81.782	Poecilia_mexicana
ENSTBEG00000004418	RTCB	100	81.386	ENSPREG00000018467	rtcb	100	81.386	Poecilia_reticulata
ENSTBEG00000004418	RTCB	100	86.139	ENSPPYG00000011752	RTCB	100	86.139	Pongo_abelii
ENSTBEG00000004418	RTCB	93	67.161	ENSPCAG00000013641	RTCB	100	67.161	Procavia_capensis
ENSTBEG00000004418	RTCB	100	85.743	ENSPCOG00000017243	RTCB	100	85.743	Propithecus_coquereli
ENSTBEG00000004418	RTCB	93	84.043	ENSPVAG00000002380	RTCB	100	84.043	Pteropus_vampyrus
ENSTBEG00000004418	RTCB	100	80.396	ENSPNYG00000022760	rtcb	100	80.396	Pundamilia_nyererei
ENSTBEG00000004418	RTCB	100	81.980	ENSPNAG00000009209	rtcb	100	81.980	Pygocentrus_nattereri
ENSTBEG00000004418	RTCB	100	85.941	ENSRNOG00000004813	Rtcb	100	85.941	Rattus_norvegicus
ENSTBEG00000004418	RTCB	100	76.877	ENSRBIG00000042090	RTCB	100	76.877	Rhinopithecus_bieti
ENSTBEG00000004418	RTCB	100	82.574	ENSSBOG00000020085	-	100	82.574	Saimiri_boliviensis_boliviensis
ENSTBEG00000004418	RTCB	88	90.380	ENSSHAG00000016277	RTCB	94	90.380	Sarcophilus_harrisii
ENSTBEG00000004418	RTCB	100	80.792	ENSSFOG00015011572	RTCB	100	80.792	Scleropages_formosus
ENSTBEG00000004418	RTCB	100	80.198	ENSSFOG00015000763	rtcb	100	80.198	Scleropages_formosus
ENSTBEG00000004418	RTCB	94	87.097	ENSSMAG00000005096	rtcb	100	78.020	Scophthalmus_maximus
ENSTBEG00000004418	RTCB	100	80.990	ENSSDUG00000012605	rtcb	100	80.990	Seriola_dumerili
ENSTBEG00000004418	RTCB	100	80.990	ENSSLDG00000019458	rtcb	100	80.990	Seriola_lalandi_dorsalis
ENSTBEG00000004418	RTCB	56	100.000	ENSSARG00000004799	-	60	100.000	Sorex_araneus
ENSTBEG00000004418	RTCB	100	82.970	ENSSPUG00000012814	RTCB	100	82.970	Sphenodon_punctatus
ENSTBEG00000004418	RTCB	100	81.980	ENSSPAG00000004623	rtcb	100	81.980	Stegastes_partitus
ENSTBEG00000004418	RTCB	100	86.139	ENSSSCG00000000158	RTCB	100	86.139	Sus_scrofa
ENSTBEG00000004418	RTCB	100	84.554	ENSTGUG00000010947	RTCB	99	84.554	Taeniopygia_guttata
ENSTBEG00000004418	RTCB	88	86.130	ENSTRUG00000009880	rtcb	97	86.130	Takifugu_rubripes
ENSTBEG00000004418	RTCB	100	80.198	ENSTNIG00000002484	rtcb	100	80.198	Tetraodon_nigroviridis
ENSTBEG00000004418	RTCB	93	84.255	ENSTTRG00000006417	RTCB	100	84.255	Tursiops_truncatus
ENSTBEG00000004418	RTCB	100	85.941	ENSUAMG00000022792	RTCB	100	85.941	Ursus_americanus
ENSTBEG00000004418	RTCB	100	85.941	ENSUMAG00000017225	RTCB	100	85.941	Ursus_maritimus
ENSTBEG00000004418	RTCB	100	85.941	ENSVPAG00000005375	RTCB	100	85.941	Vicugna_pacos
ENSTBEG00000004418	RTCB	100	85.941	ENSVVUG00000023408	RTCB	100	90.418	Vulpes_vulpes
ENSTBEG00000004418	RTCB	100	82.178	ENSXETG00000011523	rtcb	100	82.178	Xenopus_tropicalis
ENSTBEG00000004418	RTCB	100	81.584	ENSXMAG00000002855	rtcb	100	81.584	Xiphophorus_maculatus