EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTBEG00000004556 (Gene tree)
Gene ID: -
Gene Symbol: SRBD1
Alias: FLJ10379
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Tupaia_belangeri
Status: putative
Strand: Minus strand
Length: 228275 bases
Position: chrGeneScaffold_389:83756-312030
Accession: 25521
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTBEP00000003951	S1	PF00575.23	3.9e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTBET00000004583	SRBD1-201	2961	-	ENSTBEP00000003951	986 (aa)	-	UPI0000F5FCBD

Gene Model

Click here to download ENSTBEG00000004556's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTBEG00000004556's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTBEG00000004556	SRBD1	82	98.936	ENSG00000068784	SRBD1	83	98.936	Homo_sapiens
ENSTBEG00000004556	SRBD1	70	80.851	ENSAPOG00000005103	si:ch211-117n7.8	64	80.851	Acanthochromis_polyacanthus
ENSTBEG00000004556	SRBD1	82	98.936	ENSAMEG00000005993	SRBD1	82	98.936	Ailuropoda_melanoleuca
ENSTBEG00000004556	SRBD1	53	79.787	ENSACIG00000009875	si:ch211-117n7.8	68	79.787	Amphilophus_citrinellus
ENSTBEG00000004556	SRBD1	69	80.851	ENSAOCG00000024718	si:ch211-117n7.8	65	80.851	Amphiprion_ocellaris
ENSTBEG00000004556	SRBD1	66	80.851	ENSAPEG00000002645	si:ch211-117n7.8	69	80.851	Amphiprion_percula
ENSTBEG00000004556	SRBD1	63	81.915	ENSATEG00000010844	si:ch211-117n7.8	65	81.915	Anabas_testudineus
ENSTBEG00000004556	SRBD1	76	95.745	ENSAPLG00000006313	SRBD1	76	95.745	Anas_platyrhynchos
ENSTBEG00000004556	SRBD1	76	98.936	ENSANAG00000025573	SRBD1	76	98.936	Aotus_nancymaae
ENSTBEG00000004556	SRBD1	64	80.851	ENSACLG00000024219	si:ch211-117n7.8	66	80.851	Astatotilapia_calliptera
ENSTBEG00000004556	SRBD1	67	80.851	ENSAMXG00000004294	SRBD1	74	80.851	Astyanax_mexicanus
ENSTBEG00000004556	SRBD1	82	96.809	ENSBTAG00000007508	SRBD1	80	96.809	Bos_taurus
ENSTBEG00000004556	SRBD1	76	97.872	ENSCJAG00000000727	SRBD1	76	97.872	Callithrix_jacchus
ENSTBEG00000004556	SRBD1	76	100.000	ENSCAFG00000002554	SRBD1	76	100.000	Canis_familiaris
ENSTBEG00000004556	SRBD1	76	100.000	ENSCAFG00020026284	SRBD1	77	100.000	Canis_lupus_dingo
ENSTBEG00000004556	SRBD1	82	97.872	ENSCHIG00000016535	SRBD1	81	97.872	Capra_hircus
ENSTBEG00000004556	SRBD1	76	98.947	ENSTSYG00000012797	SRBD1	76	98.947	Carlito_syrichta
ENSTBEG00000004556	SRBD1	76	96.809	ENSCPOG00000004773	SRBD1	76	96.809	Cavia_porcellus
ENSTBEG00000004556	SRBD1	76	98.936	ENSCCAG00000025589	SRBD1	76	98.936	Cebus_capucinus
ENSTBEG00000004556	SRBD1	82	98.936	ENSCATG00000039530	SRBD1	83	98.936	Cercocebus_atys
ENSTBEG00000004556	SRBD1	76	98.936	ENSCLAG00000008623	SRBD1	82	98.936	Chinchilla_lanigera
ENSTBEG00000004556	SRBD1	82	98.936	ENSCSAG00000013350	SRBD1	83	98.936	Chlorocebus_sabaeus
ENSTBEG00000004556	SRBD1	64	97.895	ENSCHOG00000003805	SRBD1	64	97.895	Choloepus_hoffmanni
ENSTBEG00000004556	SRBD1	76	95.745	ENSCPBG00000005677	SRBD1	76	95.745	Chrysemys_picta_bellii
ENSTBEG00000004556	SRBD1	82	98.936	ENSCANG00000016307	SRBD1	82	98.936	Colobus_angolensis_palliatus
ENSTBEG00000004556	SRBD1	82	97.872	ENSCGRG00001000513	Srbd1	82	97.872	Cricetulus_griseus_chok1gshd
ENSTBEG00000004556	SRBD1	82	97.872	ENSCGRG00000002283	Srbd1	82	97.872	Cricetulus_griseus_crigri
ENSTBEG00000004556	SRBD1	55	81.915	ENSCSEG00000000856	si:ch211-117n7.8	56	81.915	Cynoglossus_semilaevis
ENSTBEG00000004556	SRBD1	54	80.851	ENSCVAG00000020212	si:ch211-117n7.8	59	80.851	Cyprinodon_variegatus
ENSTBEG00000004556	SRBD1	76	98.947	ENSDNOG00000018686	SRBD1	76	98.947	Dasypus_novemcinctus
ENSTBEG00000004556	SRBD1	82	94.681	ENSDORG00000010468	Srbd1	82	94.681	Dipodomys_ordii
ENSTBEG00000004556	SRBD1	55	97.143	ENSETEG00000000739	SRBD1	56	97.143	Echinops_telfairi
ENSTBEG00000004556	SRBD1	53	70.213	ENSEBUG00000008902	si:ch211-117n7.8	70	70.213	Eptatretus_burgeri
ENSTBEG00000004556	SRBD1	70	98.947	ENSEASG00005003132	SRBD1	73	98.947	Equus_asinus_asinus
ENSTBEG00000004556	SRBD1	76	98.947	ENSECAG00000013865	SRBD1	75	98.947	Equus_caballus
ENSTBEG00000004556	SRBD1	69	82.979	ENSELUG00000012592	si:ch211-117n7.8	66	82.979	Esox_lucius
ENSTBEG00000004556	SRBD1	82	98.936	ENSFCAG00000005101	SRBD1	83	98.936	Felis_catus
ENSTBEG00000004556	SRBD1	82	92.553	ENSFALG00000012966	SRBD1	76	92.553	Ficedula_albicollis
ENSTBEG00000004556	SRBD1	78	98.936	ENSFDAG00000016670	SRBD1	79	98.936	Fukomys_damarensis
ENSTBEG00000004556	SRBD1	65	79.787	ENSFHEG00000019480	si:ch211-117n7.8	65	79.787	Fundulus_heteroclitus
ENSTBEG00000004556	SRBD1	82	95.745	ENSGALG00000009990	SRBD1	82	95.745	Gallus_gallus
ENSTBEG00000004556	SRBD1	69	80.851	ENSGAFG00000019664	si:ch211-117n7.8	65	80.851	Gambusia_affinis
ENSTBEG00000004556	SRBD1	61	95.745	ENSGAGG00000006166	SRBD1	77	95.745	Gopherus_agassizii
ENSTBEG00000004556	SRBD1	80	98.936	ENSGGOG00000005910	SRBD1	81	98.936	Gorilla_gorilla
ENSTBEG00000004556	SRBD1	76	98.936	ENSHGLG00000018153	-	82	98.936	Heterocephalus_glaber_female
ENSTBEG00000004556	SRBD1	76	98.936	ENSHGLG00100015183	-	76	98.936	Heterocephalus_glaber_male
ENSTBEG00000004556	SRBD1	65	80.851	ENSIPUG00000009661	srbd1	76	80.851	Ictalurus_punctatus
ENSTBEG00000004556	SRBD1	82	97.872	ENSSTOG00000005898	SRBD1	83	97.872	Ictidomys_tridecemlineatus
ENSTBEG00000004556	SRBD1	82	98.936	ENSJJAG00000022244	Srbd1	81	98.936	Jaculus_jaculus
ENSTBEG00000004556	SRBD1	54	80.851	ENSKMAG00000003473	si:ch211-117n7.8	54	80.851	Kryptolebias_marmoratus
ENSTBEG00000004556	SRBD1	69	78.723	ENSLBEG00000027518	si:ch211-117n7.8	64	78.723	Labrus_bergylta
ENSTBEG00000004556	SRBD1	68	87.234	ENSLACG00000009790	SRBD1	79	87.234	Latimeria_chalumnae
ENSTBEG00000004556	SRBD1	70	81.915	ENSLOCG00000016360	si:ch211-117n7.8	71	81.915	Lepisosteus_oculatus
ENSTBEG00000004556	SRBD1	82	98.936	ENSMFAG00000042026	SRBD1	83	98.936	Macaca_fascicularis
ENSTBEG00000004556	SRBD1	82	98.936	ENSMMUG00000003490	SRBD1	83	98.936	Macaca_mulatta
ENSTBEG00000004556	SRBD1	82	81.720	ENSMNEG00000034701	SRBD1	82	83.516	Macaca_nemestrina
ENSTBEG00000004556	SRBD1	82	98.936	ENSMLEG00000000745	SRBD1	83	98.936	Mandrillus_leucophaeus
ENSTBEG00000004556	SRBD1	64	80.851	ENSMZEG00005027369	si:ch211-117n7.8	66	80.851	Maylandia_zebra
ENSTBEG00000004556	SRBD1	56	95.745	ENSMGAG00000010273	SRBD1	70	95.745	Meleagris_gallopavo
ENSTBEG00000004556	SRBD1	56	96.809	ENSMAUG00000013916	Srbd1	65	96.809	Mesocricetus_auratus
ENSTBEG00000004556	SRBD1	82	97.872	ENSMICG00000007835	SRBD1	83	97.872	Microcebus_murinus
ENSTBEG00000004556	SRBD1	82	94.681	ENSMOCG00000018716	Srbd1	80	94.681	Microtus_ochrogaster
ENSTBEG00000004556	SRBD1	63	79.787	ENSMMOG00000007507	si:ch211-117n7.8	67	79.787	Mola_mola
ENSTBEG00000004556	SRBD1	69	79.787	ENSMALG00000001562	si:ch211-117n7.8	65	79.787	Monopterus_albus
ENSTBEG00000004556	SRBD1	82	95.745	MGP_CAROLIEiJ_G0021934	Srbd1	82	95.745	Mus_caroli
ENSTBEG00000004556	SRBD1	82	95.745	ENSMUSG00000024135	Srbd1	82	95.745	Mus_musculus
ENSTBEG00000004556	SRBD1	82	95.745	MGP_PahariEiJ_G0020924	Srbd1	82	95.745	Mus_pahari
ENSTBEG00000004556	SRBD1	82	95.745	MGP_SPRETEiJ_G0022850	Srbd1	82	95.745	Mus_spretus
ENSTBEG00000004556	SRBD1	76	98.936	ENSMLUG00000007039	SRBD1	74	98.936	Myotis_lucifugus
ENSTBEG00000004556	SRBD1	76	98.936	ENSNGAG00000011893	Srbd1	74	98.936	Nannospalax_galili
ENSTBEG00000004556	SRBD1	61	80.851	ENSNBRG00000012873	si:ch211-117n7.8	61	80.851	Neolamprologus_brichardi
ENSTBEG00000004556	SRBD1	82	97.872	ENSNLEG00000016877	SRBD1	83	97.872	Nomascus_leucogenys
ENSTBEG00000004556	SRBD1	82	97.872	ENSODEG00000012095	SRBD1	83	97.872	Octodon_degus
ENSTBEG00000004556	SRBD1	69	79.787	ENSONIG00000000945	si:ch211-117n7.8	66	79.787	Oreochromis_niloticus
ENSTBEG00000004556	SRBD1	76	98.947	ENSOCUG00000015385	SRBD1	76	98.947	Oryctolagus_cuniculus
ENSTBEG00000004556	SRBD1	52	78.723	ENSORLG00000004427	si:ch211-117n7.8	55	78.723	Oryzias_latipes
ENSTBEG00000004556	SRBD1	69	78.723	ENSORLG00020012792	si:ch211-117n7.8	56	78.723	Oryzias_latipes_hni
ENSTBEG00000004556	SRBD1	69	78.723	ENSORLG00015018598	si:ch211-117n7.8	56	78.723	Oryzias_latipes_hsok
ENSTBEG00000004556	SRBD1	73	77.660	ENSOMEG00000012229	si:ch211-117n7.8	65	77.660	Oryzias_melastigma
ENSTBEG00000004556	SRBD1	76	96.809	ENSOGAG00000001076	SRBD1	76	96.809	Otolemur_garnettii
ENSTBEG00000004556	SRBD1	82	97.872	ENSOARG00000005958	SRBD1	80	97.872	Ovis_aries
ENSTBEG00000004556	SRBD1	82	98.936	ENSPPAG00000038442	SRBD1	84	98.913	Pan_paniscus
ENSTBEG00000004556	SRBD1	82	98.936	ENSPPRG00000003449	SRBD1	83	98.936	Panthera_pardus
ENSTBEG00000004556	SRBD1	76	100.000	ENSPTIG00000012495	SRBD1	83	98.936	Panthera_tigris_altaica
ENSTBEG00000004556	SRBD1	82	98.936	ENSPTRG00000011889	SRBD1	83	98.936	Pan_troglodytes
ENSTBEG00000004556	SRBD1	82	98.936	ENSPANG00000008063	SRBD1	83	98.936	Papio_anubis
ENSTBEG00000004556	SRBD1	66	78.723	ENSPKIG00000021973	si:ch211-117n7.8	67	78.723	Paramormyrops_kingsleyae
ENSTBEG00000004556	SRBD1	76	95.745	ENSPSIG00000008992	SRBD1	76	95.745	Pelodiscus_sinensis
ENSTBEG00000004556	SRBD1	51	78.723	ENSPMGG00000013348	si:ch211-117n7.8	78	78.723	Periophthalmus_magnuspinnatus
ENSTBEG00000004556	SRBD1	82	97.872	ENSPEMG00000020684	Srbd1	81	97.872	Peromyscus_maniculatus_bairdii
ENSTBEG00000004556	SRBD1	69	80.851	ENSPFOG00000010650	si:ch211-117n7.8	64	80.851	Poecilia_formosa
ENSTBEG00000004556	SRBD1	69	80.851	ENSPLAG00000002141	si:ch211-117n7.8	64	80.851	Poecilia_latipinna
ENSTBEG00000004556	SRBD1	69	80.851	ENSPMEG00000018537	si:ch211-117n7.8	64	80.851	Poecilia_mexicana
ENSTBEG00000004556	SRBD1	54	80.851	ENSPREG00000003258	si:ch211-117n7.8	56	80.851	Poecilia_reticulata
ENSTBEG00000004556	SRBD1	80	98.485	ENSPPYG00000012444	SRBD1	74	98.485	Pongo_abelii
ENSTBEG00000004556	SRBD1	59	90.558	ENSPCAG00000005629	SRBD1	61	90.558	Procavia_capensis
ENSTBEG00000004556	SRBD1	70	100.000	ENSPCOG00000017669	SRBD1	70	100.000	Propithecus_coquereli
ENSTBEG00000004556	SRBD1	73	96.970	ENSPVAG00000001782	SRBD1	73	96.970	Pteropus_vampyrus
ENSTBEG00000004556	SRBD1	74	82.979	ENSPNAG00000013492	SRBD1	75	82.979	Pygocentrus_nattereri
ENSTBEG00000004556	SRBD1	82	95.745	ENSRNOG00000014720	Srbd1	82	95.745	Rattus_norvegicus
ENSTBEG00000004556	SRBD1	82	98.936	ENSRBIG00000033486	SRBD1	82	98.936	Rhinopithecus_bieti
ENSTBEG00000004556	SRBD1	82	98.936	ENSRROG00000041599	SRBD1	82	98.936	Rhinopithecus_roxellana
ENSTBEG00000004556	SRBD1	76	98.936	ENSSBOG00000024982	SRBD1	76	98.936	Saimiri_boliviensis_boliviensis
ENSTBEG00000004556	SRBD1	64	80.851	ENSSFOG00015001128	si:ch211-117n7.8	72	80.851	Scleropages_formosus
ENSTBEG00000004556	SRBD1	54	78.723	ENSSMAG00000018256	si:ch211-117n7.8	54	78.723	Scophthalmus_maximus
ENSTBEG00000004556	SRBD1	54	79.787	ENSSLDG00000023189	si:ch211-117n7.8	54	79.787	Seriola_lalandi_dorsalis
ENSTBEG00000004556	SRBD1	68	98.936	ENSSARG00000009740	SRBD1	74	98.936	Sorex_araneus
ENSTBEG00000004556	SRBD1	74	91.489	ENSSPUG00000010475	SRBD1	81	91.489	Sphenodon_punctatus
ENSTBEG00000004556	SRBD1	54	80.851	ENSSPAG00000008092	-	67	80.851	Stegastes_partitus
ENSTBEG00000004556	SRBD1	76	100.000	ENSSSCG00000008445	SRBD1	78	100.000	Sus_scrofa
ENSTBEG00000004556	SRBD1	67	95.745	ENSTGUG00000003878	SRBD1	79	95.745	Taeniopygia_guttata
ENSTBEG00000004556	SRBD1	77	80.851	ENSTRUG00000007080	si:ch211-117n7.8	74	80.851	Takifugu_rubripes
ENSTBEG00000004556	SRBD1	69	78.947	ENSTNIG00000007464	si:ch211-117n7.8	64	78.947	Tetraodon_nigroviridis
ENSTBEG00000004556	SRBD1	75	98.947	ENSTTRG00000011871	SRBD1	75	98.947	Tursiops_truncatus
ENSTBEG00000004556	SRBD1	82	98.936	ENSUAMG00000008126	SRBD1	84	98.936	Ursus_americanus
ENSTBEG00000004556	SRBD1	76	100.000	ENSUMAG00000012902	SRBD1	81	98.936	Ursus_maritimus
ENSTBEG00000004556	SRBD1	67	98.947	ENSVPAG00000006825	SRBD1	74	98.947	Vicugna_pacos
ENSTBEG00000004556	SRBD1	76	100.000	ENSVVUG00000005389	SRBD1	76	100.000	Vulpes_vulpes
ENSTBEG00000004556	SRBD1	75	76.842	ENSXETG00000002760	srbd1	73	76.842	Xenopus_tropicalis
ENSTBEG00000004556	SRBD1	69	80.851	ENSXMAG00000016861	si:ch211-117n7.8	64	80.851	Xiphophorus_maculatus