EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTBEG00000005015 (Gene tree)
Gene ID: -
Gene Symbol: RC3H1
Alias: KIAA2025|RNF198|RP5-1198E17.5|roquin
Full Name: ring finger and CCCH-type domains 1
Gene Type: protein_coding
Species: Tupaia_belangeri
Status: putative
Strand: Minus strand
Length: 128669 bases
Position: chrGeneScaffold_5544:325061-453729
Accession: 29434
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTBEP00000004332	zf-CCCH	PF00642.24	0.00011	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTBET00000005031	RC3H1-201	3396	-	ENSTBEP00000004332	1131 (aa)	-	UPI0000F603C6

Gene Model

Click here to download ENSTBEG00000005015's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTBEG00000005015's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTBEG00000005015	RC3H1	64	61.248	ENSTBEG00000009622	RC3H2	72	60.468

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTBEG00000005015	RC3H1	89	97.561	ENSG00000135870	RC3H1	89	97.561	Homo_sapiens
ENSTBEG00000005015	RC3H1	93	90.909	ENSAMEG00000015657	RC3H1	93	90.909	Ailuropoda_melanoleuca
ENSTBEG00000005015	RC3H1	93	84.924	ENSAPLG00000005341	RC3H1	93	84.365	Anas_platyrhynchos
ENSTBEG00000005015	RC3H1	89	89.530	ENSACAG00000015271	RC3H1	89	88.829	Anolis_carolinensis
ENSTBEG00000005015	RC3H1	93	91.096	ENSANAG00000036716	RC3H1	93	91.781	Aotus_nancymaae
ENSTBEG00000005015	RC3H1	93	89.923	ENSBTAG00000052708	RC3H1	94	89.923	Bos_taurus
ENSTBEG00000005015	RC3H1	93	90.361	ENSCJAG00000009106	RC3H1	93	90.411	Callithrix_jacchus
ENSTBEG00000005015	RC3H1	89	97.275	ENSCAFG00000014434	RC3H1	89	97.275	Canis_familiaris
ENSTBEG00000005015	RC3H1	89	97.275	ENSCAFG00020017112	RC3H1	99	98.202	Canis_lupus_dingo
ENSTBEG00000005015	RC3H1	93	90.471	ENSCHIG00000002873	RC3H1	94	90.471	Capra_hircus
ENSTBEG00000005015	RC3H1	93	90.044	ENSTSYG00000003913	RC3H1	93	90.044	Carlito_syrichta
ENSTBEG00000005015	RC3H1	89	91.973	ENSCPOG00000004349	RC3H1	88	91.973	Cavia_porcellus
ENSTBEG00000005015	RC3H1	93	90.033	ENSCCAG00000025652	RC3H1	93	90.033	Cebus_capucinus
ENSTBEG00000005015	RC3H1	89	97.561	ENSCATG00000033497	RC3H1	89	97.561	Cercocebus_atys
ENSTBEG00000005015	RC3H1	89	96.871	ENSCLAG00000011267	RC3H1	89	96.871	Chinchilla_lanigera
ENSTBEG00000005015	RC3H1	84	97.561	ENSCSAG00000011823	RC3H1	74	97.561	Chlorocebus_sabaeus
ENSTBEG00000005015	RC3H1	88	91.610	ENSCPBG00000014670	RC3H1	87	96.304	Chrysemys_picta_bellii
ENSTBEG00000005015	RC3H1	89	97.561	ENSCANG00000032120	RC3H1	89	97.561	Colobus_angolensis_palliatus
ENSTBEG00000005015	RC3H1	89	95.640	ENSCGRG00001020812	Rc3h1	89	95.640	Cricetulus_griseus_chok1gshd
ENSTBEG00000005015	RC3H1	89	95.640	ENSCGRG00000011952	Rc3h1	89	95.640	Cricetulus_griseus_crigri
ENSTBEG00000005015	RC3H1	89	95.913	ENSDORG00000004855	Rc3h1	93	91.034	Dipodomys_ordii
ENSTBEG00000005015	RC3H1	77	95.434	ENSETEG00000012064	RC3H1	82	95.434	Echinops_telfairi
ENSTBEG00000005015	RC3H1	88	96.458	ENSEASG00005017000	RC3H1	89	96.458	Equus_asinus_asinus
ENSTBEG00000005015	RC3H1	88	96.322	ENSECAG00000021208	RC3H1	90	96.322	Equus_caballus
ENSTBEG00000005015	RC3H1	82	87.640	ENSEEUG00000014861	RC3H1	86	87.640	Erinaceus_europaeus
ENSTBEG00000005015	RC3H1	89	96.866	ENSFCAG00000014924	RC3H1	89	96.866	Felis_catus
ENSTBEG00000005015	RC3H1	89	90.013	ENSFALG00000002947	RC3H1	88	89.595	Ficedula_albicollis
ENSTBEG00000005015	RC3H1	93	89.716	ENSFDAG00000013303	RC3H1	93	89.716	Fukomys_damarensis
ENSTBEG00000005015	RC3H1	88	91.216	ENSGALG00000004587	RC3H1	92	90.528	Gallus_gallus
ENSTBEG00000005015	RC3H1	88	90.244	ENSGAGG00000018194	RC3H1	90	89.702	Gopherus_agassizii
ENSTBEG00000005015	RC3H1	84	96.730	ENSGGOG00000005735	RC3H1	86	96.730	Gorilla_gorilla
ENSTBEG00000005015	RC3H1	81	88.435	ENSHGLG00000004183	-	92	88.435	Heterocephalus_glaber_female
ENSTBEG00000005015	RC3H1	93	89.606	ENSHGLG00100008577	RC3H1	93	89.606	Heterocephalus_glaber_male
ENSTBEG00000005015	RC3H1	89	96.594	ENSSTOG00000016033	RC3H1	88	96.594	Ictidomys_tridecemlineatus
ENSTBEG00000005015	RC3H1	89	96.185	ENSJJAG00000018915	Rc3h1	89	96.185	Jaculus_jaculus
ENSTBEG00000005015	RC3H1	88	80.458	ENSLACG00000016186	RC3H1	91	80.863	Latimeria_chalumnae
ENSTBEG00000005015	RC3H1	90	90.800	ENSLAFG00000004367	RC3H1	93	90.800	Loxodonta_africana
ENSTBEG00000005015	RC3H1	89	97.561	ENSMFAG00000033725	RC3H1	89	97.561	Macaca_fascicularis
ENSTBEG00000005015	RC3H1	89	97.561	ENSMMUG00000000630	RC3H1	89	97.561	Macaca_mulatta
ENSTBEG00000005015	RC3H1	89	97.561	ENSMNEG00000035968	RC3H1	89	97.561	Macaca_nemestrina
ENSTBEG00000005015	RC3H1	89	97.561	ENSMLEG00000037455	RC3H1	89	97.561	Mandrillus_leucophaeus
ENSTBEG00000005015	RC3H1	85	95.640	ENSMAUG00000020864	Rc3h1	90	95.640	Mesocricetus_auratus
ENSTBEG00000005015	RC3H1	89	96.866	ENSMICG00000003000	RC3H1	89	96.866	Microcebus_murinus
ENSTBEG00000005015	RC3H1	82	94.368	ENSMOCG00000016587	Rc3h1	86	94.368	Microtus_ochrogaster
ENSTBEG00000005015	RC3H1	89	93.733	ENSMODG00000004289	RC3H1	89	93.733	Monodelphis_domestica
ENSTBEG00000005015	RC3H1	88	94.918	MGP_CAROLIEiJ_G0014756	Rc3h1	89	94.687	Mus_caroli
ENSTBEG00000005015	RC3H1	89	94.823	ENSMUSG00000040423	Rc3h1	89	94.823	Mus_musculus
ENSTBEG00000005015	RC3H1	89	94.550	MGP_PahariEiJ_G0027992	Rc3h1	89	94.550	Mus_pahari
ENSTBEG00000005015	RC3H1	89	94.823	MGP_SPRETEiJ_G0015563	Rc3h1	89	94.823	Mus_spretus
ENSTBEG00000005015	RC3H1	88	96.858	ENSMPUG00000004747	RC3H1	88	96.858	Mustela_putorius_furo
ENSTBEG00000005015	RC3H1	93	89.655	ENSMLUG00000011127	RC3H1	93	89.655	Myotis_lucifugus
ENSTBEG00000005015	RC3H1	89	95.913	ENSNGAG00000011135	Rc3h1	89	95.913	Nannospalax_galili
ENSTBEG00000005015	RC3H1	89	96.730	ENSNLEG00000015327	RC3H1	89	96.730	Nomascus_leucogenys
ENSTBEG00000005015	RC3H1	88	88.618	ENSOPRG00000013068	RC3H1	89	88.618	Ochotona_princeps
ENSTBEG00000005015	RC3H1	89	95.918	ENSODEG00000014185	RC3H1	89	95.918	Octodon_degus
ENSTBEG00000005015	RC3H1	89	93.623	ENSOANG00000000924	RC3H1	88	93.623	Ornithorhynchus_anatinus
ENSTBEG00000005015	RC3H1	92	90.142	ENSOCUG00000004930	RC3H1	92	90.142	Oryctolagus_cuniculus
ENSTBEG00000005015	RC3H1	93	90.345	ENSOGAG00000004044	RC3H1	93	90.345	Otolemur_garnettii
ENSTBEG00000005015	RC3H1	93	90.471	ENSOARG00000013011	RC3H1	93	90.471	Ovis_aries
ENSTBEG00000005015	RC3H1	89	97.561	ENSPPAG00000039253	RC3H1	89	97.561	Pan_paniscus
ENSTBEG00000005015	RC3H1	93	91.019	ENSPPRG00000009007	RC3H1	94	91.019	Panthera_pardus
ENSTBEG00000005015	RC3H1	89	97.139	ENSPTIG00000015326	RC3H1	88	97.139	Panthera_tigris_altaica
ENSTBEG00000005015	RC3H1	89	97.561	ENSPTRG00000001702	RC3H1	89	97.561	Pan_troglodytes
ENSTBEG00000005015	RC3H1	89	97.561	ENSPANG00000008886	RC3H1	89	97.561	Papio_anubis
ENSTBEG00000005015	RC3H1	88	91.633	ENSPSIG00000016181	RC3H1	89	91.498	Pelodiscus_sinensis
ENSTBEG00000005015	RC3H1	89	94.823	ENSPEMG00000011966	Rc3h1	89	94.687	Peromyscus_maniculatus_bairdii
ENSTBEG00000005015	RC3H1	65	93.324	ENSPCIG00000002058	RC3H1	95	98.430	Phascolarctos_cinereus
ENSTBEG00000005015	RC3H1	93	90.909	ENSPPYG00000000490	RC3H1	93	90.909	Pongo_abelii
ENSTBEG00000005015	RC3H1	74	100.000	ENSPCAG00000010775	RC3H1	80	100.000	Procavia_capensis
ENSTBEG00000005015	RC3H1	76	88.966	ENSPCOG00000021795	RC3H1	88	88.966	Propithecus_coquereli
ENSTBEG00000005015	RC3H1	93	85.517	ENSPVAG00000007593	RC3H1	93	85.517	Pteropus_vampyrus
ENSTBEG00000005015	RC3H1	81	70.732	ENSPNAG00000023439	rc3h1a	95	90.991	Pygocentrus_nattereri
ENSTBEG00000005015	RC3H1	89	97.561	ENSRBIG00000037743	RC3H1	89	97.561	Rhinopithecus_bieti
ENSTBEG00000005015	RC3H1	89	96.748	ENSRROG00000036546	RC3H1	89	96.748	Rhinopithecus_roxellana
ENSTBEG00000005015	RC3H1	84	89.234	ENSSBOG00000010664	RC3H1	95	89.234	Saimiri_boliviensis_boliviensis
ENSTBEG00000005015	RC3H1	89	93.188	ENSSHAG00000007589	RC3H1	89	93.188	Sarcophilus_harrisii
ENSTBEG00000005015	RC3H1	78	86.712	ENSSARG00000004660	RC3H1	79	86.712	Sorex_araneus
ENSTBEG00000005015	RC3H1	89	85.580	ENSSPUG00000018472	RC3H1	88	85.580	Sphenodon_punctatus
ENSTBEG00000005015	RC3H1	93	91.724	ENSSSCG00000015498	RC3H1	90	96.594	Sus_scrofa
ENSTBEG00000005015	RC3H1	89	90.676	ENSTGUG00000004090	RC3H1	89	90.122	Taeniopygia_guttata
ENSTBEG00000005015	RC3H1	93	91.019	ENSTTRG00000008572	RC3H1	93	91.019	Tursiops_truncatus
ENSTBEG00000005015	RC3H1	89	95.122	ENSUAMG00000019525	RC3H1	88	95.122	Ursus_americanus
ENSTBEG00000005015	RC3H1	93	90.690	ENSUMAG00000020087	RC3H1	93	90.690	Ursus_maritimus
ENSTBEG00000005015	RC3H1	80	98.649	ENSVPAG00000002591	RC3H1	80	98.649	Vicugna_pacos
ENSTBEG00000005015	RC3H1	89	96.748	ENSVVUG00000014201	RC3H1	93	96.903	Vulpes_vulpes
ENSTBEG00000005015	RC3H1	89	85.007	ENSXETG00000020030	rc3h1	89	84.739	Xenopus_tropicalis