EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTBEG00000005046 (Gene tree)
Gene ID: -
Gene Symbol: TNRC6C
Alias: FLJ20015|KIAA1582
Full Name: trinucleotide repeat containing 6C
Gene Type: protein_coding
Species: Tupaia_belangeri
Status: putative
Strand: Plus strand
Length: 44653 bases
Position: chrGeneScaffold_5920:74136-118788
Accession: 29318
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTBEP00000004369	Ago_hook	PF10427.9	1.7e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTBET00000005070	TNRC6C-201	3396	-	ENSTBEP00000004369	1132 (aa)	-	UPI0000F5E768

Gene Model

Click here to download ENSTBEG00000005046's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTBEG00000005046's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTBEG00000005046	TNRC6C	84	43.723	ENSTBEG00000014965	TNRC6A	52	42.424

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTBEG00000005046	TNRC6C	100	82.410	ENSG00000078687	TNRC6C	100	85.345	Homo_sapiens
ENSTBEG00000005046	TNRC6C	100	50.761	ENSAPOG00000019749	tnrc6c1	64	52.554	Acanthochromis_polyacanthus
ENSTBEG00000005046	TNRC6C	95	81.905	ENSAMEG00000013756	TNRC6C	62	81.235	Ailuropoda_melanoleuca
ENSTBEG00000005046	TNRC6C	100	47.333	ENSACIG00000008075	tnrc6c1	65	49.028	Amphilophus_citrinellus
ENSTBEG00000005046	TNRC6C	96	58.606	ENSAOCG00000023968	tnrc6c1	64	63.033	Amphiprion_ocellaris
ENSTBEG00000005046	TNRC6C	100	50.166	ENSAPEG00000009020	tnrc6c1	65	51.952	Amphiprion_percula
ENSTBEG00000005046	TNRC6C	95	77.143	ENSAPLG00000005456	TNRC6C	59	77.262	Anas_platyrhynchos
ENSTBEG00000005046	TNRC6C	95	78.571	ENSACAG00000016198	TNRC6C	57	78.087	Anolis_carolinensis
ENSTBEG00000005046	TNRC6C	100	82.498	ENSANAG00000021554	TNRC6C	64	90.234	Aotus_nancymaae
ENSTBEG00000005046	TNRC6C	95	46.423	ENSACLG00000000424	tnrc6c1	65	48.114	Astatotilapia_calliptera
ENSTBEG00000005046	TNRC6C	95	89.453	ENSBTAG00000018658	TNRC6C	64	89.453	Bos_taurus
ENSTBEG00000005046	TNRC6C	100	82.586	ENSCJAG00000019431	TNRC6C	64	90.234	Callithrix_jacchus
ENSTBEG00000005046	TNRC6C	95	85.091	ENSCAFG00000005224	TNRC6C	58	84.000	Canis_familiaris
ENSTBEG00000005046	TNRC6C	95	89.453	ENSCAFG00020006661	TNRC6C	62	88.546	Canis_lupus_dingo
ENSTBEG00000005046	TNRC6C	95	89.844	ENSCHIG00000026004	TNRC6C	64	89.844	Capra_hircus
ENSTBEG00000005046	TNRC6C	95	85.922	ENSTSYG00000005403	TNRC6C	65	85.558	Carlito_syrichta
ENSTBEG00000005046	TNRC6C	98	73.563	ENSCAPG00000007307	TNRC6C	56	78.005	Cavia_aperea
ENSTBEG00000005046	TNRC6C	94	89.844	ENSCPOG00000000467	TNRC6C	62	89.844	Cavia_porcellus
ENSTBEG00000005046	TNRC6C	100	82.762	ENSCCAG00000030524	TNRC6C	65	85.680	Cebus_capucinus
ENSTBEG00000005046	TNRC6C	100	82.410	ENSCATG00000033135	TNRC6C	67	82.058	Cercocebus_atys
ENSTBEG00000005046	TNRC6C	95	90.625	ENSCLAG00000011139	TNRC6C	57	90.625	Chinchilla_lanigera
ENSTBEG00000005046	TNRC6C	100	79.677	ENSCSAG00000005167	TNRC6C	61	79.422	Chlorocebus_sabaeus
ENSTBEG00000005046	TNRC6C	95	88.281	ENSCPBG00000027960	TNRC6C	64	88.281	Chrysemys_picta_bellii
ENSTBEG00000005046	TNRC6C	100	82.322	ENSCANG00000041771	TNRC6C	67	81.970	Colobus_angolensis_palliatus
ENSTBEG00000005046	TNRC6C	99	79.895	ENSCGRG00001022686	Tnrc6c	62	88.546	Cricetulus_griseus_chok1gshd
ENSTBEG00000005046	TNRC6C	99	80.458	ENSCGRG00000018041	Tnrc6c	62	88.546	Cricetulus_griseus_crigri
ENSTBEG00000005046	TNRC6C	100	48.684	ENSCSEG00000012744	tnrc6c1	62	48.617	Cynoglossus_semilaevis
ENSTBEG00000005046	TNRC6C	91	67.293	ENSDARG00000076847	tnrc6c1	67	59.333	Danio_rerio
ENSTBEG00000005046	TNRC6C	95	83.192	ENSDNOG00000003247	TNRC6C	59	82.346	Dasypus_novemcinctus
ENSTBEG00000005046	TNRC6C	95	88.672	ENSDORG00000004558	Tnrc6c	64	88.672	Dipodomys_ordii
ENSTBEG00000005046	TNRC6C	80	82.031	ENSETEG00000005527	TNRC6C	53	82.031	Echinops_telfairi
ENSTBEG00000005046	TNRC6C	95	87.938	ENSEASG00005004799	TNRC6C	64	87.938	Equus_asinus_asinus
ENSTBEG00000005046	TNRC6C	95	87.938	ENSECAG00000012486	TNRC6C	57	87.938	Equus_caballus
ENSTBEG00000005046	TNRC6C	89	89.844	ENSEEUG00000010008	TNRC6C	58	89.844	Erinaceus_europaeus
ENSTBEG00000005046	TNRC6C	95	89.844	ENSFCAG00000028358	TNRC6C	64	89.844	Felis_catus
ENSTBEG00000005046	TNRC6C	95	77.003	ENSFALG00000000848	TNRC6C	65	76.423	Ficedula_albicollis
ENSTBEG00000005046	TNRC6C	93	90.234	ENSFDAG00000010368	TNRC6C	61	90.234	Fukomys_damarensis
ENSTBEG00000005046	TNRC6C	100	49.013	ENSFHEG00000002936	tnrc6c1	65	48.485	Fundulus_heteroclitus
ENSTBEG00000005046	TNRC6C	95	88.281	ENSGALG00000001725	TNRC6C	64	88.281	Gallus_gallus
ENSTBEG00000005046	TNRC6C	100	49.094	ENSGAFG00000019019	tnrc6c1	68	50.341	Gambusia_affinis
ENSTBEG00000005046	TNRC6C	100	49.873	ENSGACG00000012320	tnrc6c1	60	50.351	Gasterosteus_aculeatus
ENSTBEG00000005046	TNRC6C	95	89.062	ENSGAGG00000022043	TNRC6C	61	89.062	Gopherus_agassizii
ENSTBEG00000005046	TNRC6C	100	81.547	ENSGGOG00000011304	TNRC6C	65	83.981	Gorilla_gorilla
ENSTBEG00000005046	TNRC6C	100	47.556	ENSHBUG00000010846	tnrc6c1	68	49.071	Haplochromis_burtoni
ENSTBEG00000005046	TNRC6C	95	89.453	ENSHGLG00000004809	TNRC6C	57	89.453	Heterocephalus_glaber_female
ENSTBEG00000005046	TNRC6C	95	89.453	ENSHGLG00100012597	TNRC6C	57	89.453	Heterocephalus_glaber_male
ENSTBEG00000005046	TNRC6C	99	54.226	ENSIPUG00000000818	tnrc6c1	63	54.220	Ictalurus_punctatus
ENSTBEG00000005046	TNRC6C	100	82.762	ENSSTOG00000009101	TNRC6C	62	90.234	Ictidomys_tridecemlineatus
ENSTBEG00000005046	TNRC6C	99	81.190	ENSJJAG00000017055	Tnrc6c	57	90.234	Jaculus_jaculus
ENSTBEG00000005046	TNRC6C	100	48.938	ENSKMAG00000021023	tnrc6c1	69	49.783	Kryptolebias_marmoratus
ENSTBEG00000005046	TNRC6C	95	73.366	ENSLACG00000015283	TNRC6C	59	72.881	Latimeria_chalumnae
ENSTBEG00000005046	TNRC6C	96	57.325	ENSLOCG00000013377	tnrc6c1	63	56.988	Lepisosteus_oculatus
ENSTBEG00000005046	TNRC6C	95	90.625	ENSLAFG00000011122	TNRC6C	58	90.625	Loxodonta_africana
ENSTBEG00000005046	TNRC6C	100	82.498	ENSMFAG00000043943	TNRC6C	67	82.146	Macaca_fascicularis
ENSTBEG00000005046	TNRC6C	100	82.498	ENSMMUG00000011924	TNRC6C	67	82.146	Macaca_mulatta
ENSTBEG00000005046	TNRC6C	100	82.410	ENSMNEG00000030405	TNRC6C	67	82.058	Macaca_nemestrina
ENSTBEG00000005046	TNRC6C	100	82.410	ENSMLEG00000033436	TNRC6C	67	82.058	Mandrillus_leucophaeus
ENSTBEG00000005046	TNRC6C	100	48.966	ENSMAMG00000023613	tnrc6c1	71	49.123	Mastacembelus_armatus
ENSTBEG00000005046	TNRC6C	100	47.390	ENSMZEG00005010920	tnrc6c1	65	48.114	Maylandia_zebra
ENSTBEG00000005046	TNRC6C	95	77.088	ENSMGAG00000003906	TNRC6C	58	76.969	Meleagris_gallopavo
ENSTBEG00000005046	TNRC6C	99	79.983	ENSMAUG00000021618	Tnrc6c	67	79.633	Mesocricetus_auratus
ENSTBEG00000005046	TNRC6C	100	82.762	ENSMICG00000003952	TNRC6C	64	91.016	Microcebus_murinus
ENSTBEG00000005046	TNRC6C	99	82.042	ENSMOCG00000015879	Tnrc6c	62	89.844	Microtus_ochrogaster
ENSTBEG00000005046	TNRC6C	100	50.549	ENSMMOG00000005203	tnrc6c1	68	50.348	Mola_mola
ENSTBEG00000005046	TNRC6C	100	77.710	ENSMODG00000001785	TNRC6C	57	88.672	Monodelphis_domestica
ENSTBEG00000005046	TNRC6C	99	82.042	MGP_CAROLIEiJ_G0017465	Tnrc6c	62	90.234	Mus_caroli
ENSTBEG00000005046	TNRC6C	99	81.954	ENSMUSG00000025571	Tnrc6c	62	90.234	Mus_musculus
ENSTBEG00000005046	TNRC6C	99	81.866	MGP_PahariEiJ_G0018593	Tnrc6c	62	90.625	Mus_pahari
ENSTBEG00000005046	TNRC6C	99	81.866	MGP_SPRETEiJ_G0018309	Tnrc6c	62	89.844	Mus_spretus
ENSTBEG00000005046	TNRC6C	92	83.291	ENSMPUG00000013348	TNRC6C	57	83.394	Mustela_putorius_furo
ENSTBEG00000005046	TNRC6C	90	78.074	ENSMLUG00000014431	TNRC6C	57	78.081	Myotis_lucifugus
ENSTBEG00000005046	TNRC6C	100	80.262	ENSNGAG00000012203	Tnrc6c	57	89.062	Nannospalax_galili
ENSTBEG00000005046	TNRC6C	100	48.259	ENSNBRG00000005344	tnrc6c1	65	48.518	Neolamprologus_brichardi
ENSTBEG00000005046	TNRC6C	100	75.676	ENSNLEG00000000047	TNRC6C	60	74.916	Nomascus_leucogenys
ENSTBEG00000005046	TNRC6C	95	81.641	ENSMEUG00000005104	TNRC6C	63	81.641	Notamacropus_eugenii
ENSTBEG00000005046	TNRC6C	94	89.844	ENSODEG00000012499	TNRC6C	64	89.844	Octodon_degus
ENSTBEG00000005046	TNRC6C	100	50.469	ENSONIG00000002210	tnrc6c1	77	47.034	Oreochromis_niloticus
ENSTBEG00000005046	TNRC6C	90	86.328	ENSOANG00000009758	-	55	86.328	Ornithorhynchus_anatinus
ENSTBEG00000005046	TNRC6C	82	89.275	ENSOCUG00000006122	TNRC6C	56	81.437	Oryctolagus_cuniculus
ENSTBEG00000005046	TNRC6C	100	48.793	ENSORLG00000009837	tnrc6c1	64	50.000	Oryzias_latipes
ENSTBEG00000005046	TNRC6C	100	48.841	ENSORLG00020016510	tnrc6c1	67	50.129	Oryzias_latipes_hni
ENSTBEG00000005046	TNRC6C	86	46.012	ENSORLG00015000171	tnrc6c1	71	47.508	Oryzias_latipes_hsok
ENSTBEG00000005046	TNRC6C	100	48.964	ENSOMEG00000000357	tnrc6c1	65	49.664	Oryzias_melastigma
ENSTBEG00000005046	TNRC6C	95	83.738	ENSOGAG00000007197	TNRC6C	65	83.859	Otolemur_garnettii
ENSTBEG00000005046	TNRC6C	95	77.627	ENSOARG00000006041	TNRC6C	58	77.966	Ovis_aries
ENSTBEG00000005046	TNRC6C	100	82.410	ENSPPAG00000027160	TNRC6C	64	90.234	Pan_paniscus
ENSTBEG00000005046	TNRC6C	95	90.234	ENSPPRG00000018881	TNRC6C	64	90.234	Panthera_pardus
ENSTBEG00000005046	TNRC6C	93	89.844	ENSPTIG00000008791	TNRC6C	59	89.844	Panthera_tigris_altaica
ENSTBEG00000005046	TNRC6C	100	82.322	ENSPTRG00000009699	TNRC6C	64	89.844	Pan_troglodytes
ENSTBEG00000005046	TNRC6C	100	82.410	ENSPANG00000019994	TNRC6C	67	82.058	Papio_anubis
ENSTBEG00000005046	TNRC6C	61	64.381	ENSPKIG00000005428	tnrc6c1	67	54.849	Paramormyrops_kingsleyae
ENSTBEG00000005046	TNRC6C	95	88.281	ENSPSIG00000018069	TNRC6C	61	88.281	Pelodiscus_sinensis
ENSTBEG00000005046	TNRC6C	89	44.177	ENSPMGG00000022911	tnrc6c1	60	48.289	Periophthalmus_magnuspinnatus
ENSTBEG00000005046	TNRC6C	99	81.112	ENSPEMG00000009785	Tnrc6c	64	89.062	Peromyscus_maniculatus_bairdii
ENSTBEG00000005046	TNRC6C	52	75.897	ENSPCIG00000017421	-	59	75.385	Phascolarctos_cinereus
ENSTBEG00000005046	TNRC6C	100	49.711	ENSPFOG00000012560	tnrc6c1	97	49.950	Poecilia_formosa
ENSTBEG00000005046	TNRC6C	100	49.545	ENSPLAG00000021055	tnrc6c1	70	48.814	Poecilia_latipinna
ENSTBEG00000005046	TNRC6C	100	79.422	ENSPPYG00000008679	TNRC6C	57	84.830	Pongo_abelii
ENSTBEG00000005046	TNRC6C	90	88.281	ENSPCAG00000012510	TNRC6C	59	88.281	Procavia_capensis
ENSTBEG00000005046	TNRC6C	100	82.938	ENSPCOG00000021451	TNRC6C	64	91.016	Propithecus_coquereli
ENSTBEG00000005046	TNRC6C	90	89.224	ENSPVAG00000002008	TNRC6C	60	88.987	Pteropus_vampyrus
ENSTBEG00000005046	TNRC6C	100	47.277	ENSPNYG00000014477	tnrc6c1	69	48.780	Pundamilia_nyererei
ENSTBEG00000005046	TNRC6C	99	81.602	ENSRNOG00000022395	Tnrc6c	64	90.234	Rattus_norvegicus
ENSTBEG00000005046	TNRC6C	100	82.498	ENSRBIG00000027777	TNRC6C	67	82.146	Rhinopithecus_bieti
ENSTBEG00000005046	TNRC6C	100	82.586	ENSRROG00000042912	TNRC6C	67	82.234	Rhinopithecus_roxellana
ENSTBEG00000005046	TNRC6C	100	79.422	ENSSBOG00000023981	TNRC6C	65	84.951	Saimiri_boliviensis_boliviensis
ENSTBEG00000005046	TNRC6C	63	76.649	ENSSHAG00000018330	-	76	86.946	Sarcophilus_harrisii
ENSTBEG00000005046	TNRC6C	79	54.613	ENSSFOG00015004735	-	62	56.115	Scleropages_formosus
ENSTBEG00000005046	TNRC6C	96	52.300	ENSSFOG00015006475	tnrc6c1	65	51.637	Scleropages_formosus
ENSTBEG00000005046	TNRC6C	99	50.587	ENSSMAG00000012761	tnrc6c1	68	51.354	Scophthalmus_maximus
ENSTBEG00000005046	TNRC6C	100	50.593	ENSSDUG00000002366	tnrc6c1	64	51.436	Seriola_dumerili
ENSTBEG00000005046	TNRC6C	100	49.216	ENSSLDG00000025613	tnrc6c1	68	50.169	Seriola_lalandi_dorsalis
ENSTBEG00000005046	TNRC6C	88	86.638	ENSSARG00000006816	TNRC6C	59	86.344	Sorex_araneus
ENSTBEG00000005046	TNRC6C	95	79.257	ENSSPUG00000007341	TNRC6C	71	79.137	Sphenodon_punctatus
ENSTBEG00000005046	TNRC6C	100	50.289	ENSSPAG00000014977	tnrc6c1	64	51.441	Stegastes_partitus
ENSTBEG00000005046	TNRC6C	97	78.494	ENSSSCG00000034373	TNRC6C	64	88.281	Sus_scrofa
ENSTBEG00000005046	TNRC6C	95	88.281	ENSTGUG00000007733	TNRC6C	62	88.281	Taeniopygia_guttata
ENSTBEG00000005046	TNRC6C	100	48.036	ENSTRUG00000011685	tnrc6c1	69	48.311	Takifugu_rubripes
ENSTBEG00000005046	TNRC6C	100	49.154	ENSTNIG00000005273	tnrc6c1	84	51.981	Tetraodon_nigroviridis
ENSTBEG00000005046	TNRC6C	95	91.016	ENSTTRG00000010828	TNRC6C	62	91.016	Tursiops_truncatus
ENSTBEG00000005046	TNRC6C	95	90.234	ENSUMAG00000013614	TNRC6C	57	90.234	Ursus_maritimus
ENSTBEG00000005046	TNRC6C	72	89.655	ENSVPAG00000006765	-	93	89.427	Vicugna_pacos
ENSTBEG00000005046	TNRC6C	95	89.453	ENSVVUG00000015268	TNRC6C	64	89.453	Vulpes_vulpes
ENSTBEG00000005046	TNRC6C	100	67.160	ENSXETG00000019470	tnrc6c	66	67.560	Xenopus_tropicalis
ENSTBEG00000005046	TNRC6C	100	50.084	ENSXMAG00000025971	tnrc6c1	67	50.948	Xiphophorus_maculatus