EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTBEG00000005216 (Gene tree)
Gene ID: -
Gene Symbol: ZC3HC1
Alias: NIPA
Full Name: zinc finger C3HC-type containing 1
Gene Type: protein_coding
Species: Tupaia_belangeri
Status: putative
Strand: Minus strand
Length: 73578 bases
Position: chrGeneScaffold_5207:241982-315559
Accession: 29913
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTBEP00000004497	zf-C3HC	PF07967.13	2.7e-11	1	1
ENSTBEP00000004497	Rsm1	PF08600.10	2.9e-17	1	2
ENSTBEP00000004497	Rsm1	PF08600.10	2.9e-17	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTBET00000005215	ZC3HC1-201	1509	-	ENSTBEP00000004497	502 (aa)	-	UPI0000F5F85C

Gene Model

Click here to download ENSTBEG00000005216's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTBEG00000005216's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTBEG00000005216	ZC3HC1	99	83.034	ENSG00000091732	ZC3HC1	100	91.837	Homo_sapiens
ENSTBEG00000005216	ZC3HC1	95	36.917	ENSAPOG00000009078	zc3hc1	95	36.364	Acanthochromis_polyacanthus
ENSTBEG00000005216	ZC3HC1	99	78.728	ENSAMEG00000005425	ZC3HC1	99	78.728	Ailuropoda_melanoleuca
ENSTBEG00000005216	ZC3HC1	72	40.526	ENSACIG00000019513	zc3hc1	73	40.052	Amphilophus_citrinellus
ENSTBEG00000005216	ZC3HC1	95	37.525	ENSAOCG00000024310	zc3hc1	95	36.970	Amphiprion_ocellaris
ENSTBEG00000005216	ZC3HC1	95	37.525	ENSAPEG00000004907	zc3hc1	95	36.970	Amphiprion_percula
ENSTBEG00000005216	ZC3HC1	81	39.202	ENSATEG00000016898	zc3hc1	85	38.785	Anabas_testudineus
ENSTBEG00000005216	ZC3HC1	88	51.236	ENSAPLG00000003832	ZC3HC1	99	51.236	Anas_platyrhynchos
ENSTBEG00000005216	ZC3HC1	99	52.055	ENSACAG00000001638	ZC3HC1	99	52.055	Anolis_carolinensis
ENSTBEG00000005216	ZC3HC1	99	81.873	ENSANAG00000022213	ZC3HC1	98	89.706	Aotus_nancymaae
ENSTBEG00000005216	ZC3HC1	87	37.802	ENSACLG00000025033	zc3hc1	95	37.802	Astatotilapia_calliptera
ENSTBEG00000005216	ZC3HC1	94	37.267	ENSAMXG00000036792	zc3hc1	97	37.267	Astyanax_mexicanus
ENSTBEG00000005216	ZC3HC1	99	79.840	ENSBTAG00000011247	ZC3HC1	99	79.840	Bos_taurus
ENSTBEG00000005216	ZC3HC1	99	81.238	ENSCJAG00000010536	ZC3HC1	98	89.216	Callithrix_jacchus
ENSTBEG00000005216	ZC3HC1	99	80.639	ENSCAFG00000029401	-	98	80.639	Canis_familiaris
ENSTBEG00000005216	ZC3HC1	99	80.639	ENSCAFG00000031850	-	99	80.639	Canis_familiaris
ENSTBEG00000005216	ZC3HC1	90	90.698	ENSCAFG00000001499	-	88	90.698	Canis_familiaris
ENSTBEG00000005216	ZC3HC1	99	80.639	ENSCAFG00000028735	-	99	80.639	Canis_familiaris
ENSTBEG00000005216	ZC3HC1	99	80.716	ENSCAFG00020023333	-	99	80.716	Canis_lupus_dingo
ENSTBEG00000005216	ZC3HC1	99	80.439	ENSCAFG00020006829	-	99	80.439	Canis_lupus_dingo
ENSTBEG00000005216	ZC3HC1	88	87.654	ENSCHIG00000014103	ZC3HC1	91	87.654	Capra_hircus
ENSTBEG00000005216	ZC3HC1	99	78.643	ENSTSYG00000002843	ZC3HC1	99	78.643	Carlito_syrichta
ENSTBEG00000005216	ZC3HC1	64	90.625	ENSCAPG00000016300	ZC3HC1	82	90.625	Cavia_aperea
ENSTBEG00000005216	ZC3HC1	99	74.052	ENSCPOG00000014034	ZC3HC1	99	73.453	Cavia_porcellus
ENSTBEG00000005216	ZC3HC1	90	88.372	ENSCCAG00000020384	ZC3HC1	99	91.150	Cebus_capucinus
ENSTBEG00000005216	ZC3HC1	99	82.834	ENSCATG00000023130	ZC3HC1	96	92.033	Cercocebus_atys
ENSTBEG00000005216	ZC3HC1	88	60.759	ENSCLAG00000008260	ZC3HC1	96	60.759	Chinchilla_lanigera
ENSTBEG00000005216	ZC3HC1	73	92.308	ENSCSAG00000009881	ZC3HC1	96	92.308	Chlorocebus_sabaeus
ENSTBEG00000005216	ZC3HC1	90	78.714	ENSCHOG00000011846	ZC3HC1	99	78.714	Choloepus_hoffmanni
ENSTBEG00000005216	ZC3HC1	96	58.230	ENSCPBG00000017519	ZC3HC1	99	57.738	Chrysemys_picta_bellii
ENSTBEG00000005216	ZC3HC1	99	82.635	ENSCANG00000029091	ZC3HC1	98	89.216	Colobus_angolensis_palliatus
ENSTBEG00000005216	ZC3HC1	99	76.447	ENSCGRG00001018805	Zc3hc1	99	76.447	Cricetulus_griseus_chok1gshd
ENSTBEG00000005216	ZC3HC1	90	85.440	ENSCGRG00000017114	Zc3hc1	90	85.440	Cricetulus_griseus_crigri
ENSTBEG00000005216	ZC3HC1	96	35.503	ENSCSEG00000009284	zc3hc1	95	35.108	Cynoglossus_semilaevis
ENSTBEG00000005216	ZC3HC1	95	34.879	ENSCVAG00000011566	zc3hc1	95	34.476	Cyprinodon_variegatus
ENSTBEG00000005216	ZC3HC1	95	39.673	ENSDARG00000062651	zc3hc1	95	39.673	Danio_rerio
ENSTBEG00000005216	ZC3HC1	99	79.641	ENSDNOG00000045016	ZC3HC1	99	79.641	Dasypus_novemcinctus
ENSTBEG00000005216	ZC3HC1	82	81.319	ENSDORG00000008697	Zc3hc1	89	81.319	Dipodomys_ordii
ENSTBEG00000005216	ZC3HC1	90	79.379	ENSEASG00005008789	ZC3HC1	97	79.379	Equus_asinus_asinus
ENSTBEG00000005216	ZC3HC1	99	79.880	ENSECAG00000017886	ZC3HC1	99	79.880	Equus_caballus
ENSTBEG00000005216	ZC3HC1	66	87.500	ENSEEUG00000003123	ZC3HC1	66	87.500	Erinaceus_europaeus
ENSTBEG00000005216	ZC3HC1	95	34.677	ENSELUG00000023168	zc3hc1	95	35.857	Esox_lucius
ENSTBEG00000005216	ZC3HC1	99	79.441	ENSFCAG00000010429	ZC3HC1	99	79.441	Felis_catus
ENSTBEG00000005216	ZC3HC1	72	58.556	ENSFALG00000005006	ZC3HC1	79	58.556	Ficedula_albicollis
ENSTBEG00000005216	ZC3HC1	99	75.649	ENSFDAG00000019897	ZC3HC1	99	75.649	Fukomys_damarensis
ENSTBEG00000005216	ZC3HC1	95	35.366	ENSFHEG00000020149	zc3hc1	99	33.855	Fundulus_heteroclitus
ENSTBEG00000005216	ZC3HC1	94	35.270	ENSGMOG00000002914	zc3hc1	95	34.426	Gadus_morhua
ENSTBEG00000005216	ZC3HC1	99	53.785	ENSGALG00000008003	ZC3HC1	99	53.785	Gallus_gallus
ENSTBEG00000005216	ZC3HC1	95	36.122	ENSGAFG00000016095	zc3hc1	95	35.772	Gambusia_affinis
ENSTBEG00000005216	ZC3HC1	95	37.347	ENSGACG00000019706	zc3hc1	95	37.602	Gasterosteus_aculeatus
ENSTBEG00000005216	ZC3HC1	73	66.757	ENSGAGG00000016106	ZC3HC1	94	66.757	Gopherus_agassizii
ENSTBEG00000005216	ZC3HC1	99	82.834	ENSGGOG00000015504	ZC3HC1	98	90.196	Gorilla_gorilla
ENSTBEG00000005216	ZC3HC1	95	36.437	ENSHBUG00000008347	zc3hc1	95	36.437	Haplochromis_burtoni
ENSTBEG00000005216	ZC3HC1	99	77.246	ENSHGLG00000005085	ZC3HC1	98	80.488	Heterocephalus_glaber_female
ENSTBEG00000005216	ZC3HC1	99	77.046	ENSHGLG00100011395	ZC3HC1	98	79.268	Heterocephalus_glaber_male
ENSTBEG00000005216	ZC3HC1	95	35.052	ENSHCOG00000014309	zc3hc1	95	36.214	Hippocampus_comes
ENSTBEG00000005216	ZC3HC1	99	77.445	ENSSTOG00000023599	-	99	77.445	Ictidomys_tridecemlineatus
ENSTBEG00000005216	ZC3HC1	95	35.628	ENSKMAG00000015315	zc3hc1	89	35.020	Kryptolebias_marmoratus
ENSTBEG00000005216	ZC3HC1	95	36.874	ENSLBEG00000017325	zc3hc1	95	36.400	Labrus_bergylta
ENSTBEG00000005216	ZC3HC1	79	46.829	ENSLACG00000013032	ZC3HC1	97	46.829	Latimeria_chalumnae
ENSTBEG00000005216	ZC3HC1	99	43.195	ENSLOCG00000015963	zc3hc1	99	43.110	Lepisosteus_oculatus
ENSTBEG00000005216	ZC3HC1	90	88.372	ENSLAFG00000001292	ZC3HC1	89	88.372	Loxodonta_africana
ENSTBEG00000005216	ZC3HC1	99	83.234	ENSMFAG00000030176	ZC3HC1	97	92.308	Macaca_fascicularis
ENSTBEG00000005216	ZC3HC1	90	93.023	ENSMMUG00000006155	ZC3HC1	98	92.287	Macaca_mulatta
ENSTBEG00000005216	ZC3HC1	99	83.234	ENSMNEG00000011833	ZC3HC1	99	92.417	Macaca_nemestrina
ENSTBEG00000005216	ZC3HC1	99	83.034	ENSMLEG00000027328	ZC3HC1	97	92.308	Mandrillus_leucophaeus
ENSTBEG00000005216	ZC3HC1	95	36.917	ENSMAMG00000010691	zc3hc1	95	36.566	Mastacembelus_armatus
ENSTBEG00000005216	ZC3HC1	95	36.235	ENSMZEG00005007142	zc3hc1	95	36.235	Maylandia_zebra
ENSTBEG00000005216	ZC3HC1	99	52.756	ENSMGAG00000002977	ZC3HC1	99	53.425	Meleagris_gallopavo
ENSTBEG00000005216	ZC3HC1	72	78.862	ENSMAUG00000017032	Zc3hc1	84	78.862	Mesocricetus_auratus
ENSTBEG00000005216	ZC3HC1	99	80.838	ENSMICG00000009167	ZC3HC1	99	80.838	Microcebus_murinus
ENSTBEG00000005216	ZC3HC1	99	74.451	ENSMOCG00000015239	Zc3hc1	99	74.451	Microtus_ochrogaster
ENSTBEG00000005216	ZC3HC1	71	38.624	ENSMMOG00000002204	zc3hc1	82	38.095	Mola_mola
ENSTBEG00000005216	ZC3HC1	99	63.198	ENSMODG00000014630	ZC3HC1	99	63.198	Monodelphis_domestica
ENSTBEG00000005216	ZC3HC1	94	36.531	ENSMALG00000014447	zc3hc1	95	36.970	Monopterus_albus
ENSTBEG00000005216	ZC3HC1	99	75.301	MGP_CAROLIEiJ_G0028183	Zc3hc1	99	75.301	Mus_caroli
ENSTBEG00000005216	ZC3HC1	99	74.900	ENSMUSG00000039130	Zc3hc1	99	74.900	Mus_musculus
ENSTBEG00000005216	ZC3HC1	84	82.335	MGP_PahariEiJ_G0021941	Zc3hc1	89	82.335	Mus_pahari
ENSTBEG00000005216	ZC3HC1	99	74.900	MGP_SPRETEiJ_G0029183	Zc3hc1	99	74.900	Mus_spretus
ENSTBEG00000005216	ZC3HC1	95	78.288	ENSMPUG00000005297	ZC3HC1	95	78.288	Mustela_putorius_furo
ENSTBEG00000005216	ZC3HC1	99	77.381	ENSMLUG00000000063	-	89	87.209	Myotis_lucifugus
ENSTBEG00000005216	ZC3HC1	67	82.216	ENSMLUG00000029228	-	99	82.216	Myotis_lucifugus
ENSTBEG00000005216	ZC3HC1	99	76.494	ENSNGAG00000019014	Zc3hc1	99	76.494	Nannospalax_galili
ENSTBEG00000005216	ZC3HC1	95	36.308	ENSNBRG00000004577	zc3hc1	95	35.903	Neolamprologus_brichardi
ENSTBEG00000005216	ZC3HC1	99	81.637	ENSNLEG00000012698	ZC3HC1	97	91.460	Nomascus_leucogenys
ENSTBEG00000005216	ZC3HC1	98	68.560	ENSMEUG00000011023	ZC3HC1	98	68.560	Notamacropus_eugenii
ENSTBEG00000005216	ZC3HC1	65	65.116	ENSOPRG00000007867	-	66	65.116	Ochotona_princeps
ENSTBEG00000005216	ZC3HC1	99	73.653	ENSODEG00000014604	ZC3HC1	99	76.829	Octodon_degus
ENSTBEG00000005216	ZC3HC1	95	36.437	ENSONIG00000011644	zc3hc1	95	36.032	Oreochromis_niloticus
ENSTBEG00000005216	ZC3HC1	77	68.421	ENSOANG00000011460	ZC3HC1	86	68.421	Ornithorhynchus_anatinus
ENSTBEG00000005216	ZC3HC1	90	86.047	ENSOCUG00000017137	ZC3HC1	89	86.047	Oryctolagus_cuniculus
ENSTBEG00000005216	ZC3HC1	95	35.341	ENSORLG00000014409	zc3hc1	95	35.644	Oryzias_latipes
ENSTBEG00000005216	ZC3HC1	95	35.743	ENSORLG00020015874	zc3hc1	95	36.040	Oryzias_latipes_hni
ENSTBEG00000005216	ZC3HC1	95	35.341	ENSORLG00015014641	zc3hc1	95	35.644	Oryzias_latipes_hsok
ENSTBEG00000005216	ZC3HC1	95	37.372	ENSOMEG00000020604	zc3hc1	94	37.372	Oryzias_melastigma
ENSTBEG00000005216	ZC3HC1	95	37.372	ENSOMEG00000000215	zc3hc1	94	37.372	Oryzias_melastigma
ENSTBEG00000005216	ZC3HC1	99	81.238	ENSOGAG00000026193	ZC3HC1	99	81.238	Otolemur_garnettii
ENSTBEG00000005216	ZC3HC1	90	90.698	ENSOARG00000004907	ZC3HC1	88	90.698	Ovis_aries
ENSTBEG00000005216	ZC3HC1	99	83.034	ENSPPAG00000043172	ZC3HC1	98	90.196	Pan_paniscus
ENSTBEG00000005216	ZC3HC1	99	78.842	ENSPPRG00000001004	ZC3HC1	99	78.842	Panthera_pardus
ENSTBEG00000005216	ZC3HC1	99	79.441	ENSPTIG00000007823	ZC3HC1	99	79.441	Panthera_tigris_altaica
ENSTBEG00000005216	ZC3HC1	99	82.635	ENSPTRG00000019685	ZC3HC1	98	90.196	Pan_troglodytes
ENSTBEG00000005216	ZC3HC1	90	92.308	ENSPANG00000014229	ZC3HC1	98	89.706	Papio_anubis
ENSTBEG00000005216	ZC3HC1	95	40.702	ENSPKIG00000007172	zc3hc1	95	40.702	Paramormyrops_kingsleyae
ENSTBEG00000005216	ZC3HC1	93	52.621	ENSPSIG00000016646	ZC3HC1	99	51.267	Pelodiscus_sinensis
ENSTBEG00000005216	ZC3HC1	66	38.439	ENSPMGG00000003548	zc3hc1	72	34.262	Periophthalmus_magnuspinnatus
ENSTBEG00000005216	ZC3HC1	99	74.850	ENSPEMG00000000514	Zc3hc1	99	74.850	Peromyscus_maniculatus_bairdii
ENSTBEG00000005216	ZC3HC1	89	76.923	ENSPCIG00000020619	ZC3HC1	94	76.923	Phascolarctos_cinereus
ENSTBEG00000005216	ZC3HC1	95	36.235	ENSPFOG00000003466	zc3hc1	95	36.089	Poecilia_formosa
ENSTBEG00000005216	ZC3HC1	95	35.282	ENSPLAG00000022211	zc3hc1	95	35.141	Poecilia_latipinna
ENSTBEG00000005216	ZC3HC1	95	36.049	ENSPMEG00000001458	zc3hc1	95	35.903	Poecilia_mexicana
ENSTBEG00000005216	ZC3HC1	95	35.484	ENSPREG00000004004	zc3hc1	95	35.141	Poecilia_reticulata
ENSTBEG00000005216	ZC3HC1	99	76.143	ENSPPYG00000017998	ZC3HC1	90	90.698	Pongo_abelii
ENSTBEG00000005216	ZC3HC1	91	73.420	ENSPCAG00000001182	ZC3HC1	99	73.420	Procavia_capensis
ENSTBEG00000005216	ZC3HC1	99	81.238	ENSPCOG00000017354	ZC3HC1	99	81.238	Propithecus_coquereli
ENSTBEG00000005216	ZC3HC1	99	74.651	ENSPVAG00000003195	ZC3HC1	99	74.651	Pteropus_vampyrus
ENSTBEG00000005216	ZC3HC1	95	36.235	ENSPNYG00000020692	zc3hc1	95	36.235	Pundamilia_nyererei
ENSTBEG00000005216	ZC3HC1	93	37.945	ENSPNAG00000020746	zc3hc1	95	37.736	Pygocentrus_nattereri
ENSTBEG00000005216	ZC3HC1	90	83.791	ENSRNOG00000010154	Zc3hc1	89	83.791	Rattus_norvegicus
ENSTBEG00000005216	ZC3HC1	90	81.416	ENSRBIG00000029409	ZC3HC1	99	90.995	Rhinopithecus_bieti
ENSTBEG00000005216	ZC3HC1	99	82.635	ENSRROG00000041831	ZC3HC1	97	91.758	Rhinopithecus_roxellana
ENSTBEG00000005216	ZC3HC1	78	89.145	ENSSBOG00000032787	ZC3HC1	98	90.686	Saimiri_boliviensis_boliviensis
ENSTBEG00000005216	ZC3HC1	92	67.241	ENSSHAG00000002529	ZC3HC1	99	67.241	Sarcophilus_harrisii
ENSTBEG00000005216	ZC3HC1	95	42.474	ENSSFOG00015003667	zc3hc1	91	41.856	Scleropages_formosus
ENSTBEG00000005216	ZC3HC1	96	36.255	ENSSMAG00000000647	zc3hc1	86	36.454	Scophthalmus_maximus
ENSTBEG00000005216	ZC3HC1	96	37.298	ENSSDUG00000004241	zc3hc1	94	36.948	Seriola_dumerili
ENSTBEG00000005216	ZC3HC1	96	37.097	ENSSLDG00000025056	zc3hc1	94	36.747	Seriola_lalandi_dorsalis
ENSTBEG00000005216	ZC3HC1	84	80.000	ENSSARG00000012013	ZC3HC1	84	80.000	Sorex_araneus
ENSTBEG00000005216	ZC3HC1	86	47.586	ENSSPUG00000000778	ZC3HC1	86	47.586	Sphenodon_punctatus
ENSTBEG00000005216	ZC3HC1	95	37.525	ENSSPAG00000020041	zc3hc1	95	36.768	Stegastes_partitus
ENSTBEG00000005216	ZC3HC1	99	78.842	ENSSSCG00000016565	ZC3HC1	94	88.187	Sus_scrofa
ENSTBEG00000005216	ZC3HC1	94	35.331	ENSTRUG00000020077	zc3hc1	94	35.270	Takifugu_rubripes
ENSTBEG00000005216	ZC3HC1	94	35.950	ENSTNIG00000007585	zc3hc1	99	35.391	Tetraodon_nigroviridis
ENSTBEG00000005216	ZC3HC1	95	79.123	ENSTTRG00000008458	ZC3HC1	99	79.123	Tursiops_truncatus
ENSTBEG00000005216	ZC3HC1	99	79.641	ENSUAMG00000020249	ZC3HC1	99	79.641	Ursus_americanus
ENSTBEG00000005216	ZC3HC1	99	79.242	ENSUMAG00000009268	ZC3HC1	99	79.242	Ursus_maritimus
ENSTBEG00000005216	ZC3HC1	62	91.429	ENSVPAG00000010846	ZC3HC1	61	91.429	Vicugna_pacos
ENSTBEG00000005216	ZC3HC1	96	79.792	ENSVVUG00000012386	ZC3HC1	99	79.792	Vulpes_vulpes
ENSTBEG00000005216	ZC3HC1	79	51.039	ENSXETG00000033900	zc3hc1	82	51.039	Xenopus_tropicalis
ENSTBEG00000005216	ZC3HC1	95	36.122	ENSXCOG00000013570	zc3hc1	95	35.772	Xiphophorus_couchianus
ENSTBEG00000005216	ZC3HC1	86	37.360	ENSXMAG00000010979	zc3hc1	94	36.748	Xiphophorus_maculatus