EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTBEG00000005348 (Gene tree)
Gene ID: -
Gene Symbol: PRPF6
Alias: ANT-1|C20orf14|Prp6|RP60|SNRNP102|TOM|U5-102K|bB152O15.1|hPrp6
Full Name: pre-mRNA processing factor 6
Gene Type: protein_coding
Species: Tupaia_belangeri
Status: putative
Strand: Plus strand
Length: 32617 bases
Position: chrGeneScaffold_865:3186-35802
Accession: 15860
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTBEP00000004636	PRP1_N	PF06424.12	3.9e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTBET00000005384	PRPF6-201	2739	-	ENSTBEP00000004636	912 (aa)	-	UPI0000F5D8E2

Gene Model

Click here to download ENSTBEG00000005348's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTBEG00000005348's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTBEG00000005348	PRPF6	85	98.895	ENSG00000101161	PRPF6	89	98.895	Homo_sapiens
ENSTBEG00000005348	PRPF6	85	92.778	ENSAPOG00000010395	prpf6	85	95.000	Acanthochromis_polyacanthus
ENSTBEG00000005348	PRPF6	85	98.343	ENSAMEG00000001916	PRPF6	88	98.343	Ailuropoda_melanoleuca
ENSTBEG00000005348	PRPF6	85	92.222	ENSACIG00000019862	prpf6	85	94.444	Amphilophus_citrinellus
ENSTBEG00000005348	PRPF6	85	92.778	ENSAOCG00000012988	prpf6	85	95.000	Amphiprion_ocellaris
ENSTBEG00000005348	PRPF6	79	92.778	ENSAPEG00000008301	prpf6	86	95.000	Amphiprion_percula
ENSTBEG00000005348	PRPF6	85	92.778	ENSATEG00000005581	prpf6	85	95.000	Anabas_testudineus
ENSTBEG00000005348	PRPF6	85	98.343	ENSACAG00000006464	PRPF6	84	98.343	Anolis_carolinensis
ENSTBEG00000005348	PRPF6	85	98.895	ENSANAG00000012661	PRPF6	89	98.895	Aotus_nancymaae
ENSTBEG00000005348	PRPF6	85	92.778	ENSACLG00000025875	prpf6	85	95.000	Astatotilapia_calliptera
ENSTBEG00000005348	PRPF6	85	92.222	ENSAMXG00000001929	prpf6	85	94.444	Astyanax_mexicanus
ENSTBEG00000005348	PRPF6	85	98.343	ENSBTAG00000011656	PRPF6	89	98.343	Bos_taurus
ENSTBEG00000005348	PRPF6	85	98.895	ENSCJAG00000010616	PRPF6	89	98.895	Callithrix_jacchus
ENSTBEG00000005348	PRPF6	85	98.343	ENSCAFG00000013165	PRPF6	89	98.343	Canis_familiaris
ENSTBEG00000005348	PRPF6	85	98.343	ENSCAFG00020002050	PRPF6	89	98.343	Canis_lupus_dingo
ENSTBEG00000005348	PRPF6	85	98.343	ENSCHIG00000018187	PRPF6	89	98.343	Capra_hircus
ENSTBEG00000005348	PRPF6	85	98.895	ENSTSYG00000007814	PRPF6	89	98.895	Carlito_syrichta
ENSTBEG00000005348	PRPF6	85	95.028	ENSCAPG00000015077	PRPF6	91	92.818	Cavia_aperea
ENSTBEG00000005348	PRPF6	85	98.895	ENSCPOG00000007518	PRPF6	89	98.895	Cavia_porcellus
ENSTBEG00000005348	PRPF6	78	98.895	ENSCCAG00000024564	PRPF6	82	98.895	Cebus_capucinus
ENSTBEG00000005348	PRPF6	85	98.895	ENSCATG00000037473	PRPF6	89	98.895	Cercocebus_atys
ENSTBEG00000005348	PRPF6	85	98.895	ENSCLAG00000003854	PRPF6	88	98.895	Chinchilla_lanigera
ENSTBEG00000005348	PRPF6	85	79.500	ENSCSAG00000016742	PRPF6	88	79.500	Chlorocebus_sabaeus
ENSTBEG00000005348	PRPF6	52	97.647	ENSCHOG00000003315	-	76	98.667	Choloepus_hoffmanni
ENSTBEG00000005348	PRPF6	85	96.133	ENSCPBG00000013964	PRPF6	85	98.343	Chrysemys_picta_bellii
ENSTBEG00000005348	PRPF6	85	68.889	ENSCING00000008817	-	87	68.889	Ciona_intestinalis
ENSTBEG00000005348	PRPF6	85	98.895	ENSCANG00000038230	PRPF6	89	98.895	Colobus_angolensis_palliatus
ENSTBEG00000005348	PRPF6	85	98.895	ENSCGRG00001022666	Prpf6	89	98.895	Cricetulus_griseus_chok1gshd
ENSTBEG00000005348	PRPF6	85	91.011	ENSCSEG00000018561	prpf6	89	93.258	Cynoglossus_semilaevis
ENSTBEG00000005348	PRPF6	85	92.222	ENSCVAG00000010550	prpf6	85	94.444	Cyprinodon_variegatus
ENSTBEG00000005348	PRPF6	85	92.778	ENSDARG00000091367	prpf6	88	95.000	Danio_rerio
ENSTBEG00000005348	PRPF6	85	98.343	ENSDNOG00000040544	PRPF6	89	98.343	Dasypus_novemcinctus
ENSTBEG00000005348	PRPF6	78	99.167	ENSDORG00000005406	Prpf6	90	99.167	Dipodomys_ordii
ENSTBEG00000005348	PRPF6	84	65.169	FBgn0036828	CG6841	87	67.416	Drosophila_melanogaster
ENSTBEG00000005348	PRPF6	74	100.000	ENSETEG00000004447	PRPF6	77	100.000	Echinops_telfairi
ENSTBEG00000005348	PRPF6	85	86.188	ENSEBUG00000008835	prpf6	88	86.188	Eptatretus_burgeri
ENSTBEG00000005348	PRPF6	85	98.343	ENSEASG00005023115	PRPF6	90	98.343	Equus_asinus_asinus
ENSTBEG00000005348	PRPF6	85	98.343	ENSECAG00000013983	PRPF6	88	98.343	Equus_caballus
ENSTBEG00000005348	PRPF6	62	96.471	ENSEEUG00000000180	PRPF6	54	97.333	Erinaceus_europaeus
ENSTBEG00000005348	PRPF6	85	88.889	ENSELUG00000001945	prpf6	82	88.889	Esox_lucius
ENSTBEG00000005348	PRPF6	85	98.343	ENSFCAG00000001183	PRPF6	89	98.343	Felis_catus
ENSTBEG00000005348	PRPF6	85	97.790	ENSFALG00000010326	-	86	97.790	Ficedula_albicollis
ENSTBEG00000005348	PRPF6	85	86.740	ENSFALG00000006046	-	85	86.740	Ficedula_albicollis
ENSTBEG00000005348	PRPF6	85	98.895	ENSFDAG00000006451	PRPF6	90	98.630	Fukomys_damarensis
ENSTBEG00000005348	PRPF6	85	93.889	ENSFHEG00000000560	prpf6	85	93.889	Fundulus_heteroclitus
ENSTBEG00000005348	PRPF6	85	88.889	ENSGMOG00000015622	prpf6	88	88.889	Gadus_morhua
ENSTBEG00000005348	PRPF6	85	97.790	ENSGALG00000006001	PRPF6	89	97.790	Gallus_gallus
ENSTBEG00000005348	PRPF6	75	92.222	ENSGAFG00000021109	prpf6	85	94.444	Gambusia_affinis
ENSTBEG00000005348	PRPF6	85	92.778	ENSGACG00000002576	prpf6	88	92.778	Gasterosteus_aculeatus
ENSTBEG00000005348	PRPF6	85	96.133	ENSGAGG00000008653	PRPF6	85	98.343	Gopherus_agassizii
ENSTBEG00000005348	PRPF6	85	98.895	ENSGGOG00000016876	PRPF6	89	98.895	Gorilla_gorilla
ENSTBEG00000005348	PRPF6	85	92.778	ENSHBUG00000004496	prpf6	85	95.000	Haplochromis_burtoni
ENSTBEG00000005348	PRPF6	85	98.895	ENSHGLG00000009222	PRPF6	89	98.895	Heterocephalus_glaber_female
ENSTBEG00000005348	PRPF6	85	98.895	ENSHGLG00100016600	PRPF6	91	98.895	Heterocephalus_glaber_male
ENSTBEG00000005348	PRPF6	85	93.820	ENSHCOG00000011513	prpf6	85	96.067	Hippocampus_comes
ENSTBEG00000005348	PRPF6	85	94.444	ENSIPUG00000004912	prpf6	85	94.444	Ictalurus_punctatus
ENSTBEG00000005348	PRPF6	85	85.635	ENSSTOG00000002922	PRPF6	88	85.635	Ictidomys_tridecemlineatus
ENSTBEG00000005348	PRPF6	85	98.895	ENSJJAG00000000836	Prpf6	89	98.895	Jaculus_jaculus
ENSTBEG00000005348	PRPF6	85	91.667	ENSKMAG00000017800	prpf6	85	93.889	Kryptolebias_marmoratus
ENSTBEG00000005348	PRPF6	85	93.333	ENSLBEG00000012582	prpf6	85	93.333	Labrus_bergylta
ENSTBEG00000005348	PRPF6	85	96.111	ENSLOCG00000004827	prpf6	85	98.333	Lepisosteus_oculatus
ENSTBEG00000005348	PRPF6	85	98.895	ENSLAFG00000005272	PRPF6	89	98.895	Loxodonta_africana
ENSTBEG00000005348	PRPF6	85	98.895	ENSMFAG00000037542	PRPF6	89	98.895	Macaca_fascicularis
ENSTBEG00000005348	PRPF6	85	98.895	ENSMMUG00000015558	PRPF6	87	98.895	Macaca_mulatta
ENSTBEG00000005348	PRPF6	77	90.323	ENSMNEG00000045555	PRPF6	81	90.323	Macaca_nemestrina
ENSTBEG00000005348	PRPF6	85	92.222	ENSMAMG00000010718	prpf6	85	94.444	Mastacembelus_armatus
ENSTBEG00000005348	PRPF6	81	91.034	ENSMZEG00005026539	prpf6	90	93.793	Maylandia_zebra
ENSTBEG00000005348	PRPF6	85	92.778	ENSMZEG00005015261	-	88	95.000	Maylandia_zebra
ENSTBEG00000005348	PRPF6	85	97.790	ENSMGAG00000006634	PRPF6	91	97.790	Meleagris_gallopavo
ENSTBEG00000005348	PRPF6	85	98.895	ENSMAUG00000013969	Prpf6	89	98.895	Mesocricetus_auratus
ENSTBEG00000005348	PRPF6	75	97.674	ENSMICG00000017793	PRPF6	89	97.674	Microcebus_murinus
ENSTBEG00000005348	PRPF6	85	98.895	ENSMOCG00000001701	Prpf6	89	98.895	Microtus_ochrogaster
ENSTBEG00000005348	PRPF6	85	91.573	ENSMMOG00000020419	prpf6	89	93.820	Mola_mola
ENSTBEG00000005348	PRPF6	67	98.895	ENSMODG00000017051	PRPF6	85	98.895	Monodelphis_domestica
ENSTBEG00000005348	PRPF6	85	94.444	ENSMALG00000000089	prpf6	90	94.444	Monopterus_albus
ENSTBEG00000005348	PRPF6	77	94.175	MGP_CAROLIEiJ_G0024814	Prpf6	100	100.000	Mus_caroli
ENSTBEG00000005348	PRPF6	85	98.895	ENSMUSG00000002455	Prpf6	100	100.000	Mus_musculus
ENSTBEG00000005348	PRPF6	85	98.895	MGP_PahariEiJ_G0026262	Prpf6	100	100.000	Mus_pahari
ENSTBEG00000005348	PRPF6	85	98.895	MGP_SPRETEiJ_G0025741	Prpf6	100	100.000	Mus_spretus
ENSTBEG00000005348	PRPF6	77	97.945	ENSMPUG00000008673	PRPF6	90	97.945	Mustela_putorius_furo
ENSTBEG00000005348	PRPF6	85	98.895	ENSNGAG00000003365	Prpf6	89	98.895	Nannospalax_galili
ENSTBEG00000005348	PRPF6	85	92.778	ENSNBRG00000015025	prpf6	85	95.000	Neolamprologus_brichardi
ENSTBEG00000005348	PRPF6	85	98.895	ENSNLEG00000010208	PRPF6	89	98.895	Nomascus_leucogenys
ENSTBEG00000005348	PRPF6	74	76.796	ENSMEUG00000009824	-	72	76.796	Notamacropus_eugenii
ENSTBEG00000005348	PRPF6	85	98.895	ENSODEG00000004841	PRPF6	88	98.895	Octodon_degus
ENSTBEG00000005348	PRPF6	85	92.778	ENSONIG00000017406	prpf6	85	95.000	Oreochromis_niloticus
ENSTBEG00000005348	PRPF6	85	98.895	ENSOANG00000004920	PRPF6	89	98.895	Ornithorhynchus_anatinus
ENSTBEG00000005348	PRPF6	85	98.895	ENSOCUG00000014151	PRPF6	89	98.895	Oryctolagus_cuniculus
ENSTBEG00000005348	PRPF6	85	92.222	ENSORLG00000009592	prpf6	85	92.222	Oryzias_latipes
ENSTBEG00000005348	PRPF6	85	92.778	ENSORLG00020001458	prpf6	85	92.778	Oryzias_latipes_hni
ENSTBEG00000005348	PRPF6	85	92.778	ENSORLG00015018762	prpf6	85	92.778	Oryzias_latipes_hsok
ENSTBEG00000005348	PRPF6	85	91.667	ENSOMEG00000012174	prpf6	85	93.889	Oryzias_melastigma
ENSTBEG00000005348	PRPF6	85	98.895	ENSOGAG00000007573	PRPF6	84	98.895	Otolemur_garnettii
ENSTBEG00000005348	PRPF6	85	98.343	ENSOARG00000008776	PRPF6	88	98.343	Ovis_aries
ENSTBEG00000005348	PRPF6	85	98.895	ENSPPAG00000008686	PRPF6	89	98.895	Pan_paniscus
ENSTBEG00000005348	PRPF6	85	98.343	ENSPPRG00000008497	PRPF6	89	98.343	Panthera_pardus
ENSTBEG00000005348	PRPF6	85	98.343	ENSPTIG00000011184	PRPF6	89	98.343	Panthera_tigris_altaica
ENSTBEG00000005348	PRPF6	85	98.895	ENSPTRG00000013765	PRPF6	89	98.895	Pan_troglodytes
ENSTBEG00000005348	PRPF6	85	98.895	ENSPANG00000024135	PRPF6	89	98.895	Papio_anubis
ENSTBEG00000005348	PRPF6	85	95.000	ENSPKIG00000005627	prpf6	87	97.222	Paramormyrops_kingsleyae
ENSTBEG00000005348	PRPF6	81	98.630	ENSPSIG00000007717	PRPF6	91	98.630	Pelodiscus_sinensis
ENSTBEG00000005348	PRPF6	79	87.778	ENSPMGG00000008925	prpf6	84	89.444	Periophthalmus_magnuspinnatus
ENSTBEG00000005348	PRPF6	85	98.895	ENSPEMG00000016036	Prpf6	89	98.895	Peromyscus_maniculatus_bairdii
ENSTBEG00000005348	PRPF6	85	85.083	ENSPMAG00000006144	prpf6	88	85.083	Petromyzon_marinus
ENSTBEG00000005348	PRPF6	85	98.895	ENSPCIG00000017909	PRPF6	89	98.895	Phascolarctos_cinereus
ENSTBEG00000005348	PRPF6	85	92.222	ENSPFOG00000006431	prpf6	84	94.444	Poecilia_formosa
ENSTBEG00000005348	PRPF6	85	92.222	ENSPLAG00000005974	prpf6	85	94.444	Poecilia_latipinna
ENSTBEG00000005348	PRPF6	85	92.222	ENSPMEG00000009977	prpf6	85	94.444	Poecilia_mexicana
ENSTBEG00000005348	PRPF6	85	92.222	ENSPREG00000017993	prpf6	81	94.444	Poecilia_reticulata
ENSTBEG00000005348	PRPF6	85	98.895	ENSPPYG00000011256	PRPF6	86	98.895	Pongo_abelii
ENSTBEG00000005348	PRPF6	71	98.895	ENSPCAG00000006536	PRPF6	78	98.895	Procavia_capensis
ENSTBEG00000005348	PRPF6	85	97.238	ENSPCOG00000016881	PRPF6	89	97.238	Propithecus_coquereli
ENSTBEG00000005348	PRPF6	79	97.790	ENSPVAG00000014316	PRPF6	86	97.790	Pteropus_vampyrus
ENSTBEG00000005348	PRPF6	85	92.778	ENSPNYG00000001939	prpf6	88	95.000	Pundamilia_nyererei
ENSTBEG00000005348	PRPF6	85	92.222	ENSPNAG00000015606	prpf6	85	94.444	Pygocentrus_nattereri
ENSTBEG00000005348	PRPF6	85	98.895	ENSRNOG00000051498	Prpf6	89	98.895	Rattus_norvegicus
ENSTBEG00000005348	PRPF6	85	98.895	ENSRBIG00000043613	PRPF6	89	98.895	Rhinopithecus_bieti
ENSTBEG00000005348	PRPF6	79	98.895	ENSRROG00000040969	PRPF6	86	98.895	Rhinopithecus_roxellana
ENSTBEG00000005348	PRPF6	73	91.398	ENSSBOG00000020632	PRPF6	87	91.398	Saimiri_boliviensis_boliviensis
ENSTBEG00000005348	PRPF6	85	98.895	ENSSHAG00000016810	PRPF6	89	98.895	Sarcophilus_harrisii
ENSTBEG00000005348	PRPF6	85	94.444	ENSSFOG00015020859	prpf6	89	96.667	Scleropages_formosus
ENSTBEG00000005348	PRPF6	85	93.333	ENSSMAG00000008112	prpf6	85	93.333	Scophthalmus_maximus
ENSTBEG00000005348	PRPF6	85	92.778	ENSSDUG00000016142	prpf6	85	95.000	Seriola_dumerili
ENSTBEG00000005348	PRPF6	85	92.778	ENSSLDG00000025283	prpf6	88	95.506	Seriola_lalandi_dorsalis
ENSTBEG00000005348	PRPF6	81	97.260	ENSSPUG00000018260	PRPF6	91	97.260	Sphenodon_punctatus
ENSTBEG00000005348	PRPF6	85	92.778	ENSSPAG00000015850	prpf6	85	95.000	Stegastes_partitus
ENSTBEG00000005348	PRPF6	85	98.343	ENSSSCG00000029119	PRPF6	90	97.945	Sus_scrofa
ENSTBEG00000005348	PRPF6	85	97.790	ENSTGUG00000007221	PRPF6	88	97.790	Taeniopygia_guttata
ENSTBEG00000005348	PRPF6	85	91.111	ENSTRUG00000002920	prpf6	85	93.333	Takifugu_rubripes
ENSTBEG00000005348	PRPF6	75	91.111	ENSTNIG00000017873	prpf6	72	93.333	Tetraodon_nigroviridis
ENSTBEG00000005348	PRPF6	85	98.343	ENSTTRG00000013068	PRPF6	89	98.343	Tursiops_truncatus
ENSTBEG00000005348	PRPF6	85	98.343	ENSUMAG00000021631	PRPF6	89	98.343	Ursus_maritimus
ENSTBEG00000005348	PRPF6	85	98.343	ENSVVUG00000014948	PRPF6	89	98.343	Vulpes_vulpes
ENSTBEG00000005348	PRPF6	85	95.580	ENSXETG00000012054	prpf6	86	97.790	Xenopus_tropicalis
ENSTBEG00000005348	PRPF6	85	92.222	ENSXCOG00000008082	prpf6	85	94.444	Xiphophorus_couchianus
ENSTBEG00000005348	PRPF6	85	92.222	ENSXMAG00000015581	prpf6	85	94.444	Xiphophorus_maculatus