EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTBEG00000005834 (Gene tree)
Gene ID: -
Gene Symbol: ALYREF
Alias: ALY|ALY/REF|BEF|REF|THOC4
Full Name: Aly/REF export factor
Gene Type: protein_coding
Species: Tupaia_belangeri
Status: putative
Strand: Minus strand
Length: 2519 bases
Position: chrGeneScaffold_5010:8882-11400
Accession: 19071
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTBEP00000005011	RRM_1	PF00076.22	3.3e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTBET00000005820	ALYREF-201	537	-	ENSTBEP00000005011	178 (aa)	-	UPI0000F5D9DC

Gene Model

Click here to download ENSTBEG00000005834's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTBEG00000005834's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTBEG00000005834	ALYREF	95	53.216	ENSTBEG00000013201	-	83	51.462
ENSTBEG00000005834	ALYREF	77	50.000	ENSTBEG00000010863	-	64	45.714
ENSTBEG00000005834	ALYREF	77	51.449	ENSTBEG00000014875	-	65	49.275
ENSTBEG00000005834	ALYREF	78	51.799	ENSTBEG00000014930	-	65	49.640

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTBEG00000005834	ALYREF	100	95.506	ENSG00000183684	ALYREF	67	95.506	Homo_sapiens
ENSTBEG00000005834	ALYREF	100	73.958	ENSAPOG00000018455	ALYREF	71	77.604	Acanthochromis_polyacanthus
ENSTBEG00000005834	ALYREF	100	97.191	ENSAMEG00000017463	ALYREF	72	97.191	Ailuropoda_melanoleuca
ENSTBEG00000005834	ALYREF	100	88.202	ENSACAG00000010526	ALYREF	69	88.202	Anolis_carolinensis
ENSTBEG00000005834	ALYREF	100	82.584	ENSANAG00000028229	-	58	78.090	Aotus_nancymaae
ENSTBEG00000005834	ALYREF	98	95.977	ENSANAG00000022638	-	74	95.977	Aotus_nancymaae
ENSTBEG00000005834	ALYREF	100	98.315	ENSBTAG00000008498	ALYREF	69	98.315	Bos_taurus
ENSTBEG00000005834	ALYREF	100	95.506	ENSCJAG00000039942	ALYREF	67	95.506	Callithrix_jacchus
ENSTBEG00000005834	ALYREF	100	98.315	ENSCAFG00000005877	ALYREF	69	98.315	Canis_familiaris
ENSTBEG00000005834	ALYREF	100	98.315	ENSCAFG00020009815	ALYREF	69	98.315	Canis_lupus_dingo
ENSTBEG00000005834	ALYREF	100	97.207	ENSCHIG00000017396	ALYREF	67	97.207	Capra_hircus
ENSTBEG00000005834	ALYREF	98	96.571	ENSTSYG00000002272	ALYREF	69	96.571	Carlito_syrichta
ENSTBEG00000005834	ALYREF	75	95.522	ENSCAPG00000014727	-	100	95.522	Cavia_aperea
ENSTBEG00000005834	ALYREF	100	96.629	ENSCPOG00000013710	ALYREF	69	96.629	Cavia_porcellus
ENSTBEG00000005834	ALYREF	100	96.067	ENSCCAG00000020578	-	67	96.067	Cebus_capucinus
ENSTBEG00000005834	ALYREF	100	80.899	ENSCCAG00000030237	-	78	80.337	Cebus_capucinus
ENSTBEG00000005834	ALYREF	100	96.067	ENSCATG00000033169	ALYREF	67	96.067	Cercocebus_atys
ENSTBEG00000005834	ALYREF	100	96.629	ENSCLAG00000015026	ALYREF	75	96.629	Chinchilla_lanigera
ENSTBEG00000005834	ALYREF	100	96.067	ENSCSAG00000002216	ALYREF	67	96.067	Chlorocebus_sabaeus
ENSTBEG00000005834	ALYREF	100	94.382	ENSCANG00000034056	ALYREF	88	86.857	Colobus_angolensis_palliatus
ENSTBEG00000005834	ALYREF	100	94.382	ENSCGRG00001018191	-	77	89.326	Cricetulus_griseus_chok1gshd
ENSTBEG00000005834	ALYREF	100	94.382	ENSCGRG00000015871	-	90	84.946	Cricetulus_griseus_crigri
ENSTBEG00000005834	ALYREF	60	66.087	ENSCSEG00000015438	-	62	67.826	Cynoglossus_semilaevis
ENSTBEG00000005834	ALYREF	100	96.629	ENSDNOG00000002563	ALYREF	75	96.629	Dasypus_novemcinctus
ENSTBEG00000005834	ALYREF	100	96.067	ENSDORG00000025849	-	73	96.067	Dipodomys_ordii
ENSTBEG00000005834	ALYREF	100	94.382	ENSETEG00000016596	ALYREF	100	93.258	Echinops_telfairi
ENSTBEG00000005834	ALYREF	100	97.753	ENSEASG00005005824	ALYREF	66	97.753	Equus_asinus_asinus
ENSTBEG00000005834	ALYREF	100	97.753	ENSECAG00000018754	ALYREF	66	97.753	Equus_caballus
ENSTBEG00000005834	ALYREF	52	100.000	ENSEEUG00000010164	ALYREF	54	100.000	Erinaceus_europaeus
ENSTBEG00000005834	ALYREF	100	98.315	ENSFCAG00000022549	ALYREF	68	98.315	Felis_catus
ENSTBEG00000005834	ALYREF	100	96.067	ENSFDAG00000001213	ALYREF	81	95.429	Fukomys_damarensis
ENSTBEG00000005834	ALYREF	100	95.531	ENSGALG00000007237	ALYREF	70	95.531	Gallus_gallus
ENSTBEG00000005834	ALYREF	100	78.889	ENSGACG00000013328	ALYREF	69	78.333	Gasterosteus_aculeatus
ENSTBEG00000005834	ALYREF	100	93.855	ENSGAGG00000008536	ALYREF	69	93.296	Gopherus_agassizii
ENSTBEG00000005834	ALYREF	100	96.067	ENSGGOG00000013935	ALYREF	69	94.972	Gorilla_gorilla
ENSTBEG00000005834	ALYREF	100	96.067	ENSHGLG00000008293	ALYREF	70	96.067	Heterocephalus_glaber_female
ENSTBEG00000005834	ALYREF	100	96.067	ENSHGLG00100006949	ALYREF	76	96.067	Heterocephalus_glaber_male
ENSTBEG00000005834	ALYREF	100	75.532	ENSHCOG00000015046	ALYREF	70	76.471	Hippocampus_comes
ENSTBEG00000005834	ALYREF	100	93.258	ENSJJAG00000004134	-	69	93.258	Jaculus_jaculus
ENSTBEG00000005834	ALYREF	100	78.689	ENSLACG00000005694	ALYREF	71	80.874	Latimeria_chalumnae
ENSTBEG00000005834	ALYREF	100	95.506	ENSLAFG00000003083	ALYREF	95	93.258	Loxodonta_africana
ENSTBEG00000005834	ALYREF	100	96.067	ENSMFAG00000001394	ALYREF	69	96.067	Macaca_fascicularis
ENSTBEG00000005834	ALYREF	100	96.067	ENSMMUG00000012884	ALYREF	67	96.067	Macaca_mulatta
ENSTBEG00000005834	ALYREF	100	96.067	ENSMNEG00000043666	ALYREF	67	96.067	Macaca_nemestrina
ENSTBEG00000005834	ALYREF	100	88.764	ENSMLEG00000043353	ALYREF	82	86.517	Mandrillus_leucophaeus
ENSTBEG00000005834	ALYREF	100	96.067	ENSMAUG00000020552	-	87	88.202	Mesocricetus_auratus
ENSTBEG00000005834	ALYREF	100	96.629	ENSMICG00000017403	ALYREF	67	96.629	Microcebus_murinus
ENSTBEG00000005834	ALYREF	100	96.067	ENSMOCG00000016792	-	79	88.202	Microtus_ochrogaster
ENSTBEG00000005834	ALYREF	99	96.610	ENSMODG00000003030	ALYREF	58	96.610	Monodelphis_domestica
ENSTBEG00000005834	ALYREF	100	77.083	ENSMALG00000019408	ALYREF	71	78.010	Monopterus_albus
ENSTBEG00000005834	ALYREF	100	96.629	MGP_CAROLIEiJ_G0017529	Alyref	69	96.629	Mus_caroli
ENSTBEG00000005834	ALYREF	100	80.337	MGP_CAROLIEiJ_G0014874	Alyref2	78	78.090	Mus_caroli
ENSTBEG00000005834	ALYREF	100	66.190	ENSMUSG00000090854	Gm4340	79	56.938	Mus_musculus
ENSTBEG00000005834	ALYREF	100	69.519	ENSMUSG00000086727	4931428L18Rik	77	67.568	Mus_musculus
ENSTBEG00000005834	ALYREF	100	68.449	ENSMUSG00000117091	AC153137.1	77	65.946	Mus_musculus
ENSTBEG00000005834	ALYREF	100	78.652	ENSMUSG00000060244	Alyref2	78	76.966	Mus_musculus
ENSTBEG00000005834	ALYREF	100	67.476	ENSMUSG00000097878	Gm8764	60	81.609	Mus_musculus
ENSTBEG00000005834	ALYREF	100	67.476	ENSMUSG00000091779	Gm21293	79	59.512	Mus_musculus
ENSTBEG00000005834	ALYREF	100	67.476	ENSMUSG00000097427	Gm6763	60	81.609	Mus_musculus
ENSTBEG00000005834	ALYREF	100	96.629	ENSMUSG00000025134	Alyref	69	96.629	Mus_musculus
ENSTBEG00000005834	ALYREF	100	67.476	ENSMUSG00000094144	Gm21312	79	59.512	Mus_musculus
ENSTBEG00000005834	ALYREF	100	67.476	ENSMUSG00000097550	Gm21304	79	59.512	Mus_musculus
ENSTBEG00000005834	ALYREF	100	67.476	ENSMUSG00000095022	Gm20765	79	59.512	Mus_musculus
ENSTBEG00000005834	ALYREF	74	82.443	MGP_PahariEiJ_G0027254	-	55	83.471	Mus_pahari
ENSTBEG00000005834	ALYREF	74	82.443	MGP_PahariEiJ_G0027255	-	54	83.471	Mus_pahari
ENSTBEG00000005834	ALYREF	64	99.123	MGP_PahariEiJ_G0018656	-	60	99.123	Mus_pahari
ENSTBEG00000005834	ALYREF	100	96.629	MGP_PahariEiJ_G0018655	-	69	96.629	Mus_pahari
ENSTBEG00000005834	ALYREF	100	57.269	MGP_SPRETEiJ_G0016590	-	54	77.049	Mus_spretus
ENSTBEG00000005834	ALYREF	100	96.629	MGP_SPRETEiJ_G0018373	Alyref	69	96.629	Mus_spretus
ENSTBEG00000005834	ALYREF	100	77.528	MGP_SPRETEiJ_G0015679	Alyref2	78	75.843	Mus_spretus
ENSTBEG00000005834	ALYREF	97	71.023	ENSMLUG00000025677	-	58	71.591	Myotis_lucifugus
ENSTBEG00000005834	ALYREF	97	70.056	ENSMLUG00000002626	-	69	70.621	Myotis_lucifugus
ENSTBEG00000005834	ALYREF	97	72.254	ENSMLUG00000024976	-	59	69.942	Myotis_lucifugus
ENSTBEG00000005834	ALYREF	97	70.520	ENSMLUG00000024447	-	58	68.208	Myotis_lucifugus
ENSTBEG00000005834	ALYREF	100	97.753	ENSMLUG00000009555	-	66	97.753	Myotis_lucifugus
ENSTBEG00000005834	ALYREF	97	78.613	ENSMLUG00000027516	-	58	77.457	Myotis_lucifugus
ENSTBEG00000005834	ALYREF	97	69.886	ENSMLUG00000030407	-	58	71.023	Myotis_lucifugus
ENSTBEG00000005834	ALYREF	97	72.674	ENSMLUG00000026271	-	59	70.349	Myotis_lucifugus
ENSTBEG00000005834	ALYREF	97	63.889	ENSMLUG00000024471	-	62	60.556	Myotis_lucifugus
ENSTBEG00000005834	ALYREF	97	72.254	ENSMLUG00000027352	-	58	69.942	Myotis_lucifugus
ENSTBEG00000005834	ALYREF	97	64.773	ENSMLUG00000022869	-	62	65.909	Myotis_lucifugus
ENSTBEG00000005834	ALYREF	97	61.236	ENSMLUG00000015043	-	75	61.798	Myotis_lucifugus
ENSTBEG00000005834	ALYREF	99	56.216	ENSMLUG00000023213	-	70	54.891	Myotis_lucifugus
ENSTBEG00000005834	ALYREF	97	67.241	ENSMLUG00000028343	-	83	68.391	Myotis_lucifugus
ENSTBEG00000005834	ALYREF	100	96.067	ENSNLEG00000010313	ALYREF	67	96.067	Nomascus_leucogenys
ENSTBEG00000005834	ALYREF	75	94.776	ENSMEUG00000002210	ALYREF	59	94.776	Notamacropus_eugenii
ENSTBEG00000005834	ALYREF	75	91.791	ENSOPRG00000005551	-	52	88.060	Ochotona_princeps
ENSTBEG00000005834	ALYREF	100	95.028	ENSODEG00000008359	ALYREF	70	95.028	Octodon_degus
ENSTBEG00000005834	ALYREF	100	75.132	ENSORLG00000012331	ALYREF	73	74.468	Oryzias_latipes
ENSTBEG00000005834	ALYREF	100	95.531	ENSOGAG00000012409	ALYREF	76	95.531	Otolemur_garnettii
ENSTBEG00000005834	ALYREF	100	98.315	ENSOARG00000017932	ALYREF	67	98.315	Ovis_aries
ENSTBEG00000005834	ALYREF	100	98.315	ENSPPRG00000010829	ALYREF	68	98.315	Panthera_pardus
ENSTBEG00000005834	ALYREF	84	96.644	ENSPTIG00000006399	ALYREF	81	97.931	Panthera_tigris_altaica
ENSTBEG00000005834	ALYREF	100	96.067	ENSPTRG00000009774	ALYREF	67	96.067	Pan_troglodytes
ENSTBEG00000005834	ALYREF	100	96.067	ENSPANG00000019265	ALYREF	67	96.067	Papio_anubis
ENSTBEG00000005834	ALYREF	74	91.729	ENSPSIG00000017541	ALYREF	98	91.729	Pelodiscus_sinensis
ENSTBEG00000005834	ALYREF	100	96.067	ENSPPYG00000008749	ALYREF	67	96.067	Pongo_abelii
ENSTBEG00000005834	ALYREF	100	96.629	ENSPCOG00000020874	ALYREF	67	96.629	Propithecus_coquereli
ENSTBEG00000005834	ALYREF	100	96.629	ENSPVAG00000017866	ALYREF	69	96.629	Pteropus_vampyrus
ENSTBEG00000005834	ALYREF	100	94.382	ENSRBIG00000039651	ALYREF	72	94.382	Rhinopithecus_bieti
ENSTBEG00000005834	ALYREF	100	94.413	ENSRROG00000045364	ALYREF	74	94.413	Rhinopithecus_roxellana
ENSTBEG00000005834	ALYREF	100	97.753	ENSSHAG00000010459	ALYREF	92	97.753	Sarcophilus_harrisii
ENSTBEG00000005834	ALYREF	100	59.296	ENSSDUG00000003992	-	75	59.799	Seriola_dumerili
ENSTBEG00000005834	ALYREF	100	60.714	ENSSLDG00000005386	-	75	60.714	Seriola_lalandi_dorsalis
ENSTBEG00000005834	ALYREF	100	92.697	ENSSPUG00000004600	ALYREF	69	92.697	Sphenodon_punctatus
ENSTBEG00000005834	ALYREF	100	74.093	ENSSPAG00000011178	ALYREF	69	75.130	Stegastes_partitus
ENSTBEG00000005834	ALYREF	100	98.315	ENSSSCG00000032655	ALYREF	70	98.315	Sus_scrofa
ENSTBEG00000005834	ALYREF	74	90.909	ENSTGUG00000003513	ALYREF	100	88.889	Taeniopygia_guttata
ENSTBEG00000005834	ALYREF	100	77.660	ENSTRUG00000008828	ALYREF	71	75.132	Takifugu_rubripes
ENSTBEG00000005834	ALYREF	99	96.023	ENSTTRG00000012275	ALYREF	69	96.023	Tursiops_truncatus
ENSTBEG00000005834	ALYREF	98	85.714	ENSUAMG00000016931	ALYREF	65	82.857	Ursus_americanus
ENSTBEG00000005834	ALYREF	98	85.714	ENSUMAG00000016384	ALYREF	64	82.857	Ursus_maritimus
ENSTBEG00000005834	ALYREF	100	87.709	ENSXETG00000005391	alyref	75	85.955	Xenopus_tropicalis