EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTBEG00000006011 (Gene tree)
Gene ID: -
Gene Symbol: EXOSC1
Alias: CGI-108|CSL4|Csl4p|SKI4|Ski4p|hCsl4p|p13
Full Name: exosome component 1
Gene Type: protein_coding
Species: Tupaia_belangeri
Status: putative
Strand: Minus strand
Length: 11956 bases
Position: chrGeneScaffold_242:100518-112473
Accession: 17286
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTBEP00000005172	EXOSC1	PF10447.9	3.4e-09	1	1
ENSTBEP00000005172	ECR1_N	PF14382.6	4.8e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTBET00000006012	EXOSC1-201	579	-	ENSTBEP00000005172	192 (aa)	-	UPI0000F5EC75

Gene Model

Click here to download ENSTBEG00000006011's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTBEG00000006011's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTBEG00000006011	EXOSC1	100	88.718	ENSG00000171311	EXOSC1	100	88.718	Homo_sapiens
ENSTBEG00000006011	EXOSC1	98	74.346	ENSAPOG00000007822	exosc1	98	74.346	Acanthochromis_polyacanthus
ENSTBEG00000006011	EXOSC1	100	90.256	ENSAMEG00000000129	EXOSC1	100	90.256	Ailuropoda_melanoleuca
ENSTBEG00000006011	EXOSC1	96	73.404	ENSACIG00000018956	exosc1	92	73.404	Amphilophus_citrinellus
ENSTBEG00000006011	EXOSC1	98	74.346	ENSAOCG00000010699	exosc1	98	74.346	Amphiprion_ocellaris
ENSTBEG00000006011	EXOSC1	92	66.667	ENSAPEG00000012690	exosc1	96	66.667	Amphiprion_percula
ENSTBEG00000006011	EXOSC1	98	73.822	ENSATEG00000018683	exosc1	98	73.822	Anabas_testudineus
ENSTBEG00000006011	EXOSC1	99	79.275	ENSACAG00000002101	EXOSC1	99	79.275	Anolis_carolinensis
ENSTBEG00000006011	EXOSC1	100	89.744	ENSANAG00000034669	EXOSC1	100	89.744	Aotus_nancymaae
ENSTBEG00000006011	EXOSC1	98	73.822	ENSACLG00000021243	exosc1	98	73.822	Astatotilapia_calliptera
ENSTBEG00000006011	EXOSC1	98	75.393	ENSAMXG00000011116	exosc1	98	75.393	Astyanax_mexicanus
ENSTBEG00000006011	EXOSC1	100	89.744	ENSBTAG00000012699	EXOSC1	100	89.744	Bos_taurus
ENSTBEG00000006011	EXOSC1	92	32.447	WBGene00012966	exos-1	90	32.447	Caenorhabditis_elegans
ENSTBEG00000006011	EXOSC1	100	89.231	ENSCJAG00000016586	EXOSC1	100	89.231	Callithrix_jacchus
ENSTBEG00000006011	EXOSC1	100	89.744	ENSCAFG00000009068	EXOSC1	94	89.744	Canis_familiaris
ENSTBEG00000006011	EXOSC1	100	89.744	ENSCAFG00020006002	EXOSC1	94	89.744	Canis_lupus_dingo
ENSTBEG00000006011	EXOSC1	100	89.744	ENSCHIG00000015253	EXOSC1	100	89.744	Capra_hircus
ENSTBEG00000006011	EXOSC1	100	88.718	ENSTSYG00000000760	EXOSC1	100	88.718	Carlito_syrichta
ENSTBEG00000006011	EXOSC1	100	89.231	ENSCPOG00000001173	EXOSC1	100	89.231	Cavia_porcellus
ENSTBEG00000006011	EXOSC1	100	52.062	ENSCCAG00000023986	EXOSC1	100	52.062	Cebus_capucinus
ENSTBEG00000006011	EXOSC1	100	88.718	ENSCATG00000034114	EXOSC1	100	88.718	Cercocebus_atys
ENSTBEG00000006011	EXOSC1	100	89.744	ENSCLAG00000002463	EXOSC1	100	89.744	Chinchilla_lanigera
ENSTBEG00000006011	EXOSC1	100	88.205	ENSCSAG00000005870	EXOSC1	100	88.205	Chlorocebus_sabaeus
ENSTBEG00000006011	EXOSC1	96	85.484	ENSCHOG00000006477	EXOSC1	100	85.484	Choloepus_hoffmanni
ENSTBEG00000006011	EXOSC1	55	71.698	ENSCPBG00000011949	EXOSC1	88	71.698	Chrysemys_picta_bellii
ENSTBEG00000006011	EXOSC1	95	53.476	ENSCING00000022734	-	89	53.476	Ciona_intestinalis
ENSTBEG00000006011	EXOSC1	95	56.684	ENSCSAVG00000010865	-	95	56.684	Ciona_savignyi
ENSTBEG00000006011	EXOSC1	100	88.718	ENSCANG00000034159	EXOSC1	100	88.718	Colobus_angolensis_palliatus
ENSTBEG00000006011	EXOSC1	100	88.205	ENSCGRG00001000335	Exosc1	100	88.205	Cricetulus_griseus_chok1gshd
ENSTBEG00000006011	EXOSC1	100	88.205	ENSCGRG00000011602	Exosc1	100	88.205	Cricetulus_griseus_crigri
ENSTBEG00000006011	EXOSC1	98	66.842	ENSCSEG00000007895	exosc1	95	66.842	Cynoglossus_semilaevis
ENSTBEG00000006011	EXOSC1	98	71.204	ENSCVAG00000016748	exosc1	98	71.204	Cyprinodon_variegatus
ENSTBEG00000006011	EXOSC1	98	74.346	ENSDARG00000059841	exosc1	98	74.346	Danio_rerio
ENSTBEG00000006011	EXOSC1	75	87.162	ENSDNOG00000007983	EXOSC1	100	87.162	Dasypus_novemcinctus
ENSTBEG00000006011	EXOSC1	100	89.744	ENSDORG00000016528	Exosc1	100	89.744	Dipodomys_ordii
ENSTBEG00000006011	EXOSC1	94	46.561	FBgn0032346	Csl4	92	46.561	Drosophila_melanogaster
ENSTBEG00000006011	EXOSC1	100	86.667	ENSETEG00000002469	-	100	86.667	Echinops_telfairi
ENSTBEG00000006011	EXOSC1	99	60.204	ENSEBUG00000008164	exosc1	98	60.204	Eptatretus_burgeri
ENSTBEG00000006011	EXOSC1	100	85.567	ENSEASG00005008684	EXOSC1	100	85.567	Equus_asinus_asinus
ENSTBEG00000006011	EXOSC1	60	78.261	ENSECAG00000010621	EXOSC1	69	78.261	Equus_caballus
ENSTBEG00000006011	EXOSC1	100	89.744	ENSEEUG00000005647	EXOSC1	100	89.744	Erinaceus_europaeus
ENSTBEG00000006011	EXOSC1	94	74.457	ENSELUG00000017369	exosc1	97	62.304	Esox_lucius
ENSTBEG00000006011	EXOSC1	100	90.256	ENSFCAG00000040563	EXOSC1	94	90.256	Felis_catus
ENSTBEG00000006011	EXOSC1	100	77.949	ENSFALG00000008450	EXOSC1	100	77.949	Ficedula_albicollis
ENSTBEG00000006011	EXOSC1	100	89.744	ENSFDAG00000000846	EXOSC1	100	89.744	Fukomys_damarensis
ENSTBEG00000006011	EXOSC1	98	70.681	ENSFHEG00000009154	exosc1	98	70.681	Fundulus_heteroclitus
ENSTBEG00000006011	EXOSC1	98	73.822	ENSGMOG00000008993	exosc1	98	73.822	Gadus_morhua
ENSTBEG00000006011	EXOSC1	100	72.165	ENSGALG00000039917	EXOSC1	92	85.185	Gallus_gallus
ENSTBEG00000006011	EXOSC1	98	70.681	ENSGAFG00000010265	exosc1	94	70.681	Gambusia_affinis
ENSTBEG00000006011	EXOSC1	98	73.298	ENSGACG00000018936	exosc1	98	73.298	Gasterosteus_aculeatus
ENSTBEG00000006011	EXOSC1	100	78.974	ENSGAGG00000019192	EXOSC1	100	78.974	Gopherus_agassizii
ENSTBEG00000006011	EXOSC1	100	81.959	ENSGGOG00000003099	EXOSC1	100	81.959	Gorilla_gorilla
ENSTBEG00000006011	EXOSC1	98	73.822	ENSHBUG00000017857	exosc1	98	73.822	Haplochromis_burtoni
ENSTBEG00000006011	EXOSC1	100	89.231	ENSHGLG00000016927	EXOSC1	100	89.231	Heterocephalus_glaber_female
ENSTBEG00000006011	EXOSC1	100	89.231	ENSHGLG00100012208	EXOSC1	100	89.231	Heterocephalus_glaber_male
ENSTBEG00000006011	EXOSC1	98	73.298	ENSHCOG00000019882	exosc1	98	73.298	Hippocampus_comes
ENSTBEG00000006011	EXOSC1	98	75.393	ENSIPUG00000007685	exosc1	98	75.393	Ictalurus_punctatus
ENSTBEG00000006011	EXOSC1	100	89.744	ENSSTOG00000006615	EXOSC1	100	89.744	Ictidomys_tridecemlineatus
ENSTBEG00000006011	EXOSC1	63	72.727	ENSSTOG00000029860	-	93	72.727	Ictidomys_tridecemlineatus
ENSTBEG00000006011	EXOSC1	100	89.231	ENSJJAG00000013311	Exosc1	100	89.231	Jaculus_jaculus
ENSTBEG00000006011	EXOSC1	98	72.775	ENSKMAG00000001202	exosc1	81	72.775	Kryptolebias_marmoratus
ENSTBEG00000006011	EXOSC1	98	73.822	ENSLBEG00000011448	exosc1	98	73.822	Labrus_bergylta
ENSTBEG00000006011	EXOSC1	98	55.102	ENSLOCG00000003776	exosc1	98	55.102	Lepisosteus_oculatus
ENSTBEG00000006011	EXOSC1	100	89.231	ENSLAFG00000015983	EXOSC1	100	89.231	Loxodonta_africana
ENSTBEG00000006011	EXOSC1	100	88.718	ENSMFAG00000001493	EXOSC1	100	88.718	Macaca_fascicularis
ENSTBEG00000006011	EXOSC1	100	88.718	ENSMMUG00000020028	EXOSC1	100	82.474	Macaca_mulatta
ENSTBEG00000006011	EXOSC1	100	88.718	ENSMNEG00000029816	EXOSC1	100	88.718	Macaca_nemestrina
ENSTBEG00000006011	EXOSC1	100	83.077	ENSMLEG00000027643	EXOSC1	100	83.077	Mandrillus_leucophaeus
ENSTBEG00000006011	EXOSC1	98	74.869	ENSMAMG00000012200	exosc1	98	74.869	Mastacembelus_armatus
ENSTBEG00000006011	EXOSC1	98	73.822	ENSMZEG00005007042	exosc1	98	73.822	Maylandia_zebra
ENSTBEG00000006011	EXOSC1	100	82.474	ENSMAUG00000020462	-	100	82.474	Mesocricetus_auratus
ENSTBEG00000006011	EXOSC1	100	89.231	ENSMICG00000007664	EXOSC1	100	82.990	Microcebus_murinus
ENSTBEG00000006011	EXOSC1	97	81.579	ENSMOCG00000017124	-	97	81.579	Microtus_ochrogaster
ENSTBEG00000006011	EXOSC1	100	88.205	ENSMOCG00000006004	-	100	88.205	Microtus_ochrogaster
ENSTBEG00000006011	EXOSC1	99	55.440	ENSMMOG00000021403	exosc1	99	55.440	Mola_mola
ENSTBEG00000006011	EXOSC1	100	85.714	ENSMODG00000004213	EXOSC1	100	85.714	Monodelphis_domestica
ENSTBEG00000006011	EXOSC1	94	75.000	ENSMALG00000007061	exosc1	92	75.000	Monopterus_albus
ENSTBEG00000006011	EXOSC1	100	88.205	MGP_CAROLIEiJ_G0022959	Exosc1	100	88.205	Mus_caroli
ENSTBEG00000006011	EXOSC1	100	87.692	ENSMUSG00000034321	Exosc1	100	87.692	Mus_musculus
ENSTBEG00000006011	EXOSC1	100	88.205	MGP_PahariEiJ_G0014449	Exosc1	100	88.205	Mus_pahari
ENSTBEG00000006011	EXOSC1	100	88.205	MGP_SPRETEiJ_G0023880	Exosc1	100	88.205	Mus_spretus
ENSTBEG00000006011	EXOSC1	100	90.256	ENSMPUG00000017044	EXOSC1	100	90.256	Mustela_putorius_furo
ENSTBEG00000006011	EXOSC1	100	89.231	ENSMLUG00000009228	EXOSC1	100	89.231	Myotis_lucifugus
ENSTBEG00000006011	EXOSC1	100	87.179	ENSNGAG00000022033	Exosc1	100	87.179	Nannospalax_galili
ENSTBEG00000006011	EXOSC1	98	55.263	ENSNBRG00000024007	exosc1	97	55.263	Neolamprologus_brichardi
ENSTBEG00000006011	EXOSC1	100	88.205	ENSNLEG00000013872	EXOSC1	100	88.205	Nomascus_leucogenys
ENSTBEG00000006011	EXOSC1	59	80.000	ENSMEUG00000002246	EXOSC1	100	80.000	Notamacropus_eugenii
ENSTBEG00000006011	EXOSC1	100	87.692	ENSOPRG00000005065	EXOSC1	100	87.692	Ochotona_princeps
ENSTBEG00000006011	EXOSC1	100	89.231	ENSODEG00000016709	EXOSC1	100	89.231	Octodon_degus
ENSTBEG00000006011	EXOSC1	98	73.822	ENSONIG00000017683	exosc1	98	73.822	Oreochromis_niloticus
ENSTBEG00000006011	EXOSC1	59	91.304	ENSOANG00000006563	EXOSC1	96	91.736	Ornithorhynchus_anatinus
ENSTBEG00000006011	EXOSC1	100	83.590	ENSOCUG00000026461	-	100	83.590	Oryctolagus_cuniculus
ENSTBEG00000006011	EXOSC1	100	88.776	ENSOCUG00000011898	-	100	88.776	Oryctolagus_cuniculus
ENSTBEG00000006011	EXOSC1	98	73.438	ENSORLG00000011595	exosc1	98	73.438	Oryzias_latipes
ENSTBEG00000006011	EXOSC1	98	73.438	ENSORLG00020005831	exosc1	98	73.438	Oryzias_latipes_hni
ENSTBEG00000006011	EXOSC1	98	73.438	ENSORLG00015004317	exosc1	98	73.438	Oryzias_latipes_hsok
ENSTBEG00000006011	EXOSC1	98	58.201	ENSOMEG00000013907	exosc1	98	58.201	Oryzias_melastigma
ENSTBEG00000006011	EXOSC1	100	88.718	ENSOGAG00000016259	EXOSC1	100	88.718	Otolemur_garnettii
ENSTBEG00000006011	EXOSC1	100	89.231	ENSOARG00000010136	EXOSC1	100	89.231	Ovis_aries
ENSTBEG00000006011	EXOSC1	100	82.741	ENSPPAG00000039842	EXOSC1	100	82.741	Pan_paniscus
ENSTBEG00000006011	EXOSC1	100	90.256	ENSPPRG00000023366	EXOSC1	100	90.256	Panthera_pardus
ENSTBEG00000006011	EXOSC1	100	90.256	ENSPTIG00000017701	EXOSC1	100	90.256	Panthera_tigris_altaica
ENSTBEG00000006011	EXOSC1	100	88.718	ENSPTRG00000002808	EXOSC1	100	88.718	Pan_troglodytes
ENSTBEG00000006011	EXOSC1	100	88.718	ENSPANG00000021324	EXOSC1	100	88.718	Papio_anubis
ENSTBEG00000006011	EXOSC1	98	75.393	ENSPKIG00000016037	exosc1	98	75.393	Paramormyrops_kingsleyae
ENSTBEG00000006011	EXOSC1	69	81.481	ENSPSIG00000013571	EXOSC1	98	80.992	Pelodiscus_sinensis
ENSTBEG00000006011	EXOSC1	98	66.842	ENSPMGG00000014002	exosc1	98	66.842	Periophthalmus_magnuspinnatus
ENSTBEG00000006011	EXOSC1	100	88.205	ENSPEMG00000010710	-	100	88.205	Peromyscus_maniculatus_bairdii
ENSTBEG00000006011	EXOSC1	95	66.845	ENSPMAG00000000195	exosc1	95	66.845	Petromyzon_marinus
ENSTBEG00000006011	EXOSC1	100	85.641	ENSPCIG00000002210	EXOSC1	99	85.641	Phascolarctos_cinereus
ENSTBEG00000006011	EXOSC1	98	70.157	ENSPFOG00000006755	exosc1	94	70.157	Poecilia_formosa
ENSTBEG00000006011	EXOSC1	98	70.157	ENSPLAG00000005880	exosc1	98	70.157	Poecilia_latipinna
ENSTBEG00000006011	EXOSC1	98	70.157	ENSPMEG00000015598	exosc1	94	70.157	Poecilia_mexicana
ENSTBEG00000006011	EXOSC1	98	64.737	ENSPREG00000000405	exosc1	93	64.737	Poecilia_reticulata
ENSTBEG00000006011	EXOSC1	100	88.205	ENSPPYG00000002531	EXOSC1	100	88.205	Pongo_abelii
ENSTBEG00000006011	EXOSC1	100	89.231	ENSPCAG00000009135	EXOSC1	100	89.231	Procavia_capensis
ENSTBEG00000006011	EXOSC1	100	83.077	ENSPCOG00000027539	EXOSC1	100	83.077	Propithecus_coquereli
ENSTBEG00000006011	EXOSC1	100	89.744	ENSPVAG00000003372	EXOSC1	100	89.744	Pteropus_vampyrus
ENSTBEG00000006011	EXOSC1	98	73.822	ENSPNYG00000021745	exosc1	98	73.822	Pundamilia_nyererei
ENSTBEG00000006011	EXOSC1	98	74.869	ENSPNAG00000001944	exosc1	98	74.869	Pygocentrus_nattereri
ENSTBEG00000006011	EXOSC1	100	88.205	ENSRNOG00000048708	Exosc1	100	88.205	Rattus_norvegicus
ENSTBEG00000006011	EXOSC1	100	88.718	ENSRBIG00000035618	EXOSC1	100	88.718	Rhinopithecus_bieti
ENSTBEG00000006011	EXOSC1	100	88.718	ENSRROG00000032589	EXOSC1	100	82.474	Rhinopithecus_roxellana
ENSTBEG00000006011	EXOSC1	100	89.744	ENSSBOG00000000359	EXOSC1	100	89.744	Saimiri_boliviensis_boliviensis
ENSTBEG00000006011	EXOSC1	69	94.118	ENSSHAG00000018219	EXOSC1	93	94.118	Sarcophilus_harrisii
ENSTBEG00000006011	EXOSC1	97	72.105	ENSSFOG00015016289	-	98	72.105	Scleropages_formosus
ENSTBEG00000006011	EXOSC1	98	76.963	ENSSFOG00015009069	exosc1	98	76.963	Scleropages_formosus
ENSTBEG00000006011	EXOSC1	98	74.869	ENSSMAG00000003721	exosc1	98	74.869	Scophthalmus_maximus
ENSTBEG00000006011	EXOSC1	98	74.346	ENSSDUG00000002993	exosc1	98	74.346	Seriola_dumerili
ENSTBEG00000006011	EXOSC1	98	74.346	ENSSLDG00000025181	exosc1	98	74.346	Seriola_lalandi_dorsalis
ENSTBEG00000006011	EXOSC1	100	86.667	ENSSARG00000000162	EXOSC1	100	86.667	Sorex_araneus
ENSTBEG00000006011	EXOSC1	99	78.866	ENSSPUG00000012263	EXOSC1	99	78.866	Sphenodon_punctatus
ENSTBEG00000006011	EXOSC1	98	67.725	ENSSPAG00000016792	exosc1	82	67.725	Stegastes_partitus
ENSTBEG00000006011	EXOSC1	100	89.744	ENSSSCG00000010518	EXOSC1	91	89.744	Sus_scrofa
ENSTBEG00000006011	EXOSC1	98	76.562	ENSTGUG00000009692	EXOSC1	99	76.562	Taeniopygia_guttata
ENSTBEG00000006011	EXOSC1	97	69.841	ENSTRUG00000007706	exosc1	98	69.841	Takifugu_rubripes
ENSTBEG00000006011	EXOSC1	97	68.750	ENSTNIG00000014079	exosc1	97	68.750	Tetraodon_nigroviridis
ENSTBEG00000006011	EXOSC1	94	89.130	ENSTTRG00000009887	EXOSC1	100	89.130	Tursiops_truncatus
ENSTBEG00000006011	EXOSC1	100	73.333	ENSUAMG00000010266	EXOSC1	100	73.333	Ursus_americanus
ENSTBEG00000006011	EXOSC1	100	73.333	ENSUMAG00000022002	EXOSC1	100	73.333	Ursus_maritimus
ENSTBEG00000006011	EXOSC1	100	89.744	ENSVVUG00000023192	EXOSC1	63	89.744	Vulpes_vulpes
ENSTBEG00000006011	EXOSC1	98	73.958	ENSXETG00000003434	exosc1	99	73.958	Xenopus_tropicalis
ENSTBEG00000006011	EXOSC1	63	80.488	ENSXCOG00000014499	exosc1	95	80.488	Xiphophorus_couchianus
ENSTBEG00000006011	EXOSC1	98	65.263	ENSXMAG00000023382	exosc1	93	65.263	Xiphophorus_maculatus