EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTBEG00000006238 (Gene tree)
Gene ID: -
Gene Symbol: SFPQ
Alias: PPP1R140|PSF
Full Name: splicing factor proline and glutamine rich
Gene Type: protein_coding
Species: Tupaia_belangeri
Status: putative
Strand: Minus strand
Length: 7662 bases
Position: chrGeneScaffold_1603:332-7993
Accession: 10774
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTBEP00000005385	RRM_1	PF00076.22	3.4e-25	1	2
ENSTBEP00000005385	RRM_1	PF00076.22	3.4e-25	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTBET00000006253	SFPQ-201	1890	-	ENSTBEP00000005385	629 (aa)	-	UPI0000F5D58A

Gene Model

Click here to download ENSTBEG00000006238's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTBEG00000006238's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTBEG00000006238	SFPQ	59	99.010	ENSAMEG00000000815	SFPQ	95	94.815	Ailuropoda_melanoleuca
ENSTBEG00000006238	SFPQ	71	55.556	ENSACIG00000000905	sfpq	54	76.404	Amphilophus_citrinellus
ENSTBEG00000006238	SFPQ	83	73.333	ENSANAG00000027438	-	67	68.523	Aotus_nancymaae
ENSTBEG00000006238	SFPQ	64	81.572	ENSCAFG00000003595	-	85	86.308	Canis_familiaris
ENSTBEG00000006238	SFPQ	83	64.107	ENSCAFG00000018271	-	73	77.151	Canis_familiaris
ENSTBEG00000006238	SFPQ	59	89.630	ENSCAFG00000017608	-	82	77.561	Canis_familiaris
ENSTBEG00000006238	SFPQ	83	64.000	ENSCAFG00020004881	-	73	76.991	Canis_lupus_dingo
ENSTBEG00000006238	SFPQ	66	71.577	ENSCCAG00000029361	-	69	86.431	Cebus_capucinus
ENSTBEG00000006238	SFPQ	74	82.105	ENSCATG00000032664	-	95	67.630	Cercocebus_atys
ENSTBEG00000006238	SFPQ	57	98.020	ENSCGRG00000010128	Sfpq	91	95.019	Cricetulus_griseus_crigri
ENSTBEG00000006238	SFPQ	58	65.489	ENSCSEG00000007852	sfpq	64	79.310	Cynoglossus_semilaevis
ENSTBEG00000006238	SFPQ	64	98.020	ENSETEG00000001095	SFPQ	57	94.636	Echinops_telfairi
ENSTBEG00000006238	SFPQ	67	81.352	ENSFCAG00000042862	SFPQ	79	86.308	Felis_catus
ENSTBEG00000006238	SFPQ	58	79.468	ENSGMOG00000011950	SFPQ	69	80.385	Gadus_morhua
ENSTBEG00000006238	SFPQ	59	67.580	ENSGALG00000002514	SFPQ	64	90.299	Gallus_gallus
ENSTBEG00000006238	SFPQ	62	54.945	ENSGACG00000002034	sfpq	66	79.008	Gasterosteus_aculeatus
ENSTBEG00000006238	SFPQ	57	94.297	ENSGGOG00000026354	SFPQ	94	95.028	Gorilla_gorilla
ENSTBEG00000006238	SFPQ	57	84.556	ENSLACG00000014728	SFPQ	57	84.231	Latimeria_chalumnae
ENSTBEG00000006238	SFPQ	60	79.710	ENSLOCG00000001067	sfpq	61	80.741	Lepisosteus_oculatus
ENSTBEG00000006238	SFPQ	80	77.362	ENSLAFG00000015951	SFPQ	86	82.759	Loxodonta_africana
ENSTBEG00000006238	SFPQ	77	63.185	ENSMAMG00000007875	sfpq	52	81.923	Mastacembelus_armatus
ENSTBEG00000006238	SFPQ	61	74.775	ENSMAUG00000006402	Sfpq	70	86.707	Mesocricetus_auratus
ENSTBEG00000006238	SFPQ	89	55.000	ENSMMOG00000001074	sfpq	58	81.154	Mola_mola
ENSTBEG00000006238	SFPQ	60	69.213	ENSMODG00000017937	SFPQ	73	82.507	Monodelphis_domestica
ENSTBEG00000006238	SFPQ	79	72.673	ENSMUSG00000028820	Sfpq	69	87.009	Mus_musculus
ENSTBEG00000006238	SFPQ	79	75.644	MGP_PahariEiJ_G0028818	Sfpq	69	87.009	Mus_pahari
ENSTBEG00000006238	SFPQ	79	72.673	MGP_SPRETEiJ_G0027466	Sfpq	69	87.009	Mus_spretus
ENSTBEG00000006238	SFPQ	54	82.948	ENSOPRG00000013696	SFPQ	59	94.403	Ochotona_princeps
ENSTBEG00000006238	SFPQ	57	78.442	ENSODEG00000005485	SFPQ	91	74.890	Octodon_degus
ENSTBEG00000006238	SFPQ	51	88.462	ENSOARG00000019439	SFPQ	63	94.656	Ovis_aries
ENSTBEG00000006238	SFPQ	60	64.737	ENSPKIG00000023035	sfpq	71	82.308	Paramormyrops_kingsleyae
ENSTBEG00000006238	SFPQ	58	67.749	ENSPSIG00000011494	SFPQ	95	92.720	Pelodiscus_sinensis
ENSTBEG00000006238	SFPQ	60	98.020	ENSPEMG00000009794	Sfpq	87	94.444	Peromyscus_maniculatus_bairdii
ENSTBEG00000006238	SFPQ	60	68.989	ENSPCIG00000000923	SFPQ	70	82.799	Phascolarctos_cinereus
ENSTBEG00000006238	SFPQ	79	77.030	ENSPVAG00000001865	SFPQ	80	83.010	Pteropus_vampyrus
ENSTBEG00000006238	SFPQ	99	57.000	ENSRBIG00000035286	SFPQ	94	95.028	Rhinopithecus_bieti
ENSTBEG00000006238	SFPQ	57	59.674	ENSSFOG00015009289	sfpq	62	82.625	Scleropages_formosus
ENSTBEG00000006238	SFPQ	58	81.298	ENSSMAG00000018201	sfpq	52	81.298	Scophthalmus_maximus
ENSTBEG00000006238	SFPQ	58	42.923	ENSSPAG00000016550	sfpq	50	80.228	Stegastes_partitus
ENSTBEG00000006238	SFPQ	79	80.792	ENSSSCG00000035690	SFPQ	79	85.575	Sus_scrofa
ENSTBEG00000006238	SFPQ	81	98.824	ENSTTRG00000013930	SFPQ	57	85.258	Tursiops_truncatus
ENSTBEG00000006238	SFPQ	50	94.495	ENSUAMG00000026758	SFPQ	89	70.000	Ursus_americanus
ENSTBEG00000006238	SFPQ	59	98.214	ENSVPAG00000006960	-	56	98.214	Vicugna_pacos