EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTBEG00000006367 (Gene tree)
Gene ID: -
Gene Symbol: TRNT1
Alias: CCA1|CGI-47|MtCCA
Full Name: tRNA nucleotidyl transferase 1
Gene Type: protein_coding
Species: Tupaia_belangeri
Status: putative
Strand: Plus strand
Length: 37482 bases
Position: chrGeneScaffold_2976:738771-776252
Accession: 17341
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTBEP00000005480	PolyA_pol	PF01743.20	1e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTBET00000006362	TRNT1-201	909	-	ENSTBEP00000005480	303 (aa)	-	UPI0000F60AD4

Gene Model

Click here to download ENSTBEG00000006367's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTBEG00000006367's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTBEG00000006367	TRNT1	100	78.277	ENSG00000072756	TRNT1	100	85.484	Homo_sapiens
ENSTBEG00000006367	TRNT1	86	57.692	ENSAPOG00000013687	trnt1	61	57.692	Acanthochromis_polyacanthus
ENSTBEG00000006367	TRNT1	100	78.067	ENSAMEG00000014520	TRNT1	70	78.067	Ailuropoda_melanoleuca
ENSTBEG00000006367	TRNT1	98	49.438	ENSACIG00000021706	trnt1	83	49.438	Amphilophus_citrinellus
ENSTBEG00000006367	TRNT1	86	58.462	ENSAOCG00000024612	trnt1	61	58.462	Amphiprion_ocellaris
ENSTBEG00000006367	TRNT1	87	49.242	ENSAPEG00000022627	trnt1	59	49.242	Amphiprion_percula
ENSTBEG00000006367	TRNT1	79	61.765	ENSATEG00000008928	trnt1	59	61.765	Anabas_testudineus
ENSTBEG00000006367	TRNT1	81	61.044	ENSAPLG00000004258	TRNT1	62	61.044	Anas_platyrhynchos
ENSTBEG00000006367	TRNT1	98	50.833	ENSACAG00000005657	TRNT1	82	50.833	Anolis_carolinensis
ENSTBEG00000006367	TRNT1	100	78.652	ENSANAG00000024802	TRNT1	70	78.652	Aotus_nancymaae
ENSTBEG00000006367	TRNT1	86	60.076	ENSACLG00000022227	trnt1	61	60.076	Astatotilapia_calliptera
ENSTBEG00000006367	TRNT1	92	55.594	ENSAMXG00000003960	trnt1	66	55.594	Astyanax_mexicanus
ENSTBEG00000006367	TRNT1	100	73.408	ENSBTAG00000019534	TRNT1	70	73.408	Bos_taurus
ENSTBEG00000006367	TRNT1	79	47.718	WBGene00010089	hpo-31	55	47.718	Caenorhabditis_elegans
ENSTBEG00000006367	TRNT1	100	78.652	ENSCJAG00000015466	TRNT1	70	78.652	Callithrix_jacchus
ENSTBEG00000006367	TRNT1	100	76.779	ENSCAFG00000005985	TRNT1	70	76.779	Canis_familiaris
ENSTBEG00000006367	TRNT1	100	76.779	ENSCAFG00020014746	TRNT1	70	76.779	Canis_lupus_dingo
ENSTBEG00000006367	TRNT1	100	74.157	ENSCHIG00000007030	TRNT1	70	74.157	Capra_hircus
ENSTBEG00000006367	TRNT1	100	74.483	ENSTSYG00000013390	TRNT1	75	74.483	Carlito_syrichta
ENSTBEG00000006367	TRNT1	82	43.919	ENSCAPG00000006891	TRNT1	79	43.919	Cavia_aperea
ENSTBEG00000006367	TRNT1	100	75.655	ENSCPOG00000007849	TRNT1	100	87.313	Cavia_porcellus
ENSTBEG00000006367	TRNT1	94	71.713	ENSCCAG00000002919	TRNT1	68	73.932	Cebus_capucinus
ENSTBEG00000006367	TRNT1	100	79.775	ENSCATG00000031985	TRNT1	69	79.775	Cercocebus_atys
ENSTBEG00000006367	TRNT1	100	76.404	ENSCLAG00000005186	TRNT1	75	89.375	Chinchilla_lanigera
ENSTBEG00000006367	TRNT1	100	79.775	ENSCSAG00000011052	TRNT1	70	79.775	Chlorocebus_sabaeus
ENSTBEG00000006367	TRNT1	80	70.124	ENSCPBG00000017636	TRNT1	55	70.124	Chrysemys_picta_bellii
ENSTBEG00000006367	TRNT1	76	43.913	ENSCING00000007069	-	57	43.913	Ciona_intestinalis
ENSTBEG00000006367	TRNT1	84	41.406	ENSCSAVG00000007494	-	61	41.406	Ciona_savignyi
ENSTBEG00000006367	TRNT1	100	79.775	ENSCANG00000039030	TRNT1	70	79.775	Colobus_angolensis_palliatus
ENSTBEG00000006367	TRNT1	100	70.690	ENSCGRG00001009998	Trnt1	75	70.690	Cricetulus_griseus_chok1gshd
ENSTBEG00000006367	TRNT1	100	70.690	ENSCGRG00000013410	Trnt1	75	88.125	Cricetulus_griseus_crigri
ENSTBEG00000006367	TRNT1	86	59.231	ENSCSEG00000008157	trnt1	61	59.231	Cynoglossus_semilaevis
ENSTBEG00000006367	TRNT1	80	63.071	ENSCVAG00000019770	trnt1	57	63.071	Cyprinodon_variegatus
ENSTBEG00000006367	TRNT1	83	60.870	ENSDARG00000075297	trnt1	57	60.870	Danio_rerio
ENSTBEG00000006367	TRNT1	100	76.779	ENSDNOG00000008837	TRNT1	70	76.779	Dasypus_novemcinctus
ENSTBEG00000006367	TRNT1	88	74.906	ENSDORG00000014035	Trnt1	62	74.906	Dipodomys_ordii
ENSTBEG00000006367	TRNT1	85	48.148	FBgn0037369	CG2100	56	48.148	Drosophila_melanogaster
ENSTBEG00000006367	TRNT1	82	74.297	ENSETEG00000018177	TRNT1	100	74.297	Echinops_telfairi
ENSTBEG00000006367	TRNT1	79	54.393	ENSEBUG00000012779	-	57	54.393	Eptatretus_burgeri
ENSTBEG00000006367	TRNT1	100	75.676	ENSEASG00005003577	TRNT1	75	75.676	Equus_asinus_asinus
ENSTBEG00000006367	TRNT1	100	75.676	ENSECAG00000014420	TRNT1	79	75.676	Equus_caballus
ENSTBEG00000006367	TRNT1	100	69.310	ENSEEUG00000009567	TRNT1	75	69.310	Erinaceus_europaeus
ENSTBEG00000006367	TRNT1	86	57.634	ENSELUG00000003802	trnt1	61	57.634	Esox_lucius
ENSTBEG00000006367	TRNT1	100	76.779	ENSFCAG00000026805	TRNT1	70	76.779	Felis_catus
ENSTBEG00000006367	TRNT1	81	59.839	ENSFALG00000013539	TRNT1	65	59.839	Ficedula_albicollis
ENSTBEG00000006367	TRNT1	100	76.404	ENSFDAG00000018412	TRNT1	100	88.806	Fukomys_damarensis
ENSTBEG00000006367	TRNT1	80	63.900	ENSFHEG00000019294	trnt1	57	63.900	Fundulus_heteroclitus
ENSTBEG00000006367	TRNT1	80	61.411	ENSGMOG00000007460	trnt1	57	61.411	Gadus_morhua
ENSTBEG00000006367	TRNT1	84	62.934	ENSGALG00000017368	TRNT1	60	62.934	Gallus_gallus
ENSTBEG00000006367	TRNT1	86	58.077	ENSGAFG00000008647	trnt1	61	58.077	Gambusia_affinis
ENSTBEG00000006367	TRNT1	86	58.555	ENSGACG00000011903	trnt1	61	58.555	Gasterosteus_aculeatus
ENSTBEG00000006367	TRNT1	96	67.451	ENSGAGG00000020942	TRNT1	66	67.451	Gopherus_agassizii
ENSTBEG00000006367	TRNT1	100	79.026	ENSGGOG00000015286	TRNT1	70	79.026	Gorilla_gorilla
ENSTBEG00000006367	TRNT1	86	60.076	ENSHBUG00000002797	trnt1	61	60.076	Haplochromis_burtoni
ENSTBEG00000006367	TRNT1	100	72.973	ENSHGLG00000000221	-	70	72.973	Heterocephalus_glaber_female
ENSTBEG00000006367	TRNT1	100	77.528	ENSHGLG00000003649	TRNT1	70	77.528	Heterocephalus_glaber_female
ENSTBEG00000006367	TRNT1	100	75.655	ENSHGLG00100016421	TRNT1	74	83.750	Heterocephalus_glaber_male
ENSTBEG00000006367	TRNT1	86	56.538	ENSHCOG00000010618	trnt1	61	56.538	Hippocampus_comes
ENSTBEG00000006367	TRNT1	86	59.316	ENSIPUG00000000971	trnt1	61	59.316	Ictalurus_punctatus
ENSTBEG00000006367	TRNT1	100	76.779	ENSSTOG00000000150	TRNT1	77	90.566	Ictidomys_tridecemlineatus
ENSTBEG00000006367	TRNT1	100	72.759	ENSJJAG00000018561	Trnt1	75	72.759	Jaculus_jaculus
ENSTBEG00000006367	TRNT1	98	48.739	ENSKMAG00000011307	trnt1	83	48.739	Kryptolebias_marmoratus
ENSTBEG00000006367	TRNT1	86	52.874	ENSLBEG00000019457	trnt1	59	52.874	Labrus_bergylta
ENSTBEG00000006367	TRNT1	87	62.782	ENSLACG00000013227	TRNT1	61	62.782	Latimeria_chalumnae
ENSTBEG00000006367	TRNT1	86	60.227	ENSLOCG00000011105	trnt1	61	60.227	Lepisosteus_oculatus
ENSTBEG00000006367	TRNT1	100	81.081	ENSLAFG00000023191	TRNT1	70	81.081	Loxodonta_africana
ENSTBEG00000006367	TRNT1	100	79.775	ENSMFAG00000045113	TRNT1	69	79.775	Macaca_fascicularis
ENSTBEG00000006367	TRNT1	100	79.775	ENSMMUG00000017983	TRNT1	69	79.775	Macaca_mulatta
ENSTBEG00000006367	TRNT1	100	79.775	ENSMNEG00000037805	TRNT1	69	79.775	Macaca_nemestrina
ENSTBEG00000006367	TRNT1	83	77.880	ENSMLEG00000033671	TRNT1	66	77.880	Mandrillus_leucophaeus
ENSTBEG00000006367	TRNT1	86	58.846	ENSMAMG00000023401	trnt1	61	58.846	Mastacembelus_armatus
ENSTBEG00000006367	TRNT1	86	60.076	ENSMZEG00005009141	trnt1	61	60.076	Maylandia_zebra
ENSTBEG00000006367	TRNT1	59	54.595	ENSMGAG00000009971	TRNT1	58	54.595	Meleagris_gallopavo
ENSTBEG00000006367	TRNT1	100	71.034	ENSMAUG00000020707	Trnt1	75	71.034	Mesocricetus_auratus
ENSTBEG00000006367	TRNT1	100	77.154	ENSMICG00000016615	TRNT1	70	77.154	Microcebus_murinus
ENSTBEG00000006367	TRNT1	100	70.345	ENSMOCG00000004539	Trnt1	75	70.345	Microtus_ochrogaster
ENSTBEG00000006367	TRNT1	87	57.778	ENSMMOG00000010742	trnt1	63	57.778	Mola_mola
ENSTBEG00000006367	TRNT1	100	66.552	ENSMODG00000004368	TRNT1	75	66.552	Monodelphis_domestica
ENSTBEG00000006367	TRNT1	86	58.077	ENSMALG00000008376	trnt1	62	58.077	Monopterus_albus
ENSTBEG00000006367	TRNT1	100	70.345	MGP_CAROLIEiJ_G0028698	Trnt1	100	86.567	Mus_caroli
ENSTBEG00000006367	TRNT1	100	72.973	ENSMUSG00000013736	Trnt1	100	86.567	Mus_musculus
ENSTBEG00000006367	TRNT1	100	70.000	MGP_PahariEiJ_G0022449	Trnt1	100	85.075	Mus_pahari
ENSTBEG00000006367	TRNT1	100	72.973	MGP_SPRETEiJ_G0029726	Trnt1	100	86.567	Mus_spretus
ENSTBEG00000006367	TRNT1	100	78.652	ENSMPUG00000017017	TRNT1	70	78.652	Mustela_putorius_furo
ENSTBEG00000006367	TRNT1	84	72.603	ENSMLUG00000011864	TRNT1	66	72.603	Myotis_lucifugus
ENSTBEG00000006367	TRNT1	100	75.676	ENSNGAG00000000537	Trnt1	73	90.000	Nannospalax_galili
ENSTBEG00000006367	TRNT1	86	60.456	ENSNBRG00000023606	trnt1	75	60.456	Neolamprologus_brichardi
ENSTBEG00000006367	TRNT1	100	78.652	ENSNLEG00000003226	TRNT1	70	78.652	Nomascus_leucogenys
ENSTBEG00000006367	TRNT1	100	66.897	ENSMEUG00000004684	TRNT1	75	66.897	Notamacropus_eugenii
ENSTBEG00000006367	TRNT1	83	62.500	ENSOPRG00000015067	TRNT1	73	62.500	Ochotona_princeps
ENSTBEG00000006367	TRNT1	100	76.030	ENSODEG00000007597	TRNT1	70	76.030	Octodon_degus
ENSTBEG00000006367	TRNT1	86	61.303	ENSONIG00000020273	trnt1	60	61.303	Oreochromis_niloticus
ENSTBEG00000006367	TRNT1	99	62.921	ENSOANG00000007514	TRNT1	62	62.921	Ornithorhynchus_anatinus
ENSTBEG00000006367	TRNT1	100	66.107	ENSOCUG00000008580	TRNT1	77	66.107	Oryctolagus_cuniculus
ENSTBEG00000006367	TRNT1	84	60.311	ENSORLG00000003165	trnt1	61	60.311	Oryzias_latipes
ENSTBEG00000006367	TRNT1	84	60.700	ENSORLG00020022060	trnt1	61	60.700	Oryzias_latipes_hni
ENSTBEG00000006367	TRNT1	86	60.000	ENSORLG00015018915	trnt1	61	60.000	Oryzias_latipes_hsok
ENSTBEG00000006367	TRNT1	99	46.518	ENSOMEG00000003331	trnt1	83	46.518	Oryzias_melastigma
ENSTBEG00000006367	TRNT1	100	74.157	ENSOARG00000008631	TRNT1	70	74.157	Ovis_aries
ENSTBEG00000006367	TRNT1	100	78.652	ENSPPAG00000043566	TRNT1	70	78.652	Pan_paniscus
ENSTBEG00000006367	TRNT1	100	77.528	ENSPPRG00000001327	TRNT1	70	77.528	Panthera_pardus
ENSTBEG00000006367	TRNT1	100	76.779	ENSPTIG00000011448	TRNT1	70	76.779	Panthera_tigris_altaica
ENSTBEG00000006367	TRNT1	100	78.277	ENSPTRG00000014564	TRNT1	70	78.277	Pan_troglodytes
ENSTBEG00000006367	TRNT1	100	79.775	ENSPANG00000025944	TRNT1	69	79.775	Papio_anubis
ENSTBEG00000006367	TRNT1	85	58.140	ENSPKIG00000020015	trnt1	60	58.140	Paramormyrops_kingsleyae
ENSTBEG00000006367	TRNT1	88	62.162	ENSPSIG00000017356	TRNT1	75	62.162	Pelodiscus_sinensis
ENSTBEG00000006367	TRNT1	86	57.692	ENSPMGG00000008888	trnt1	60	57.692	Periophthalmus_magnuspinnatus
ENSTBEG00000006367	TRNT1	100	72.973	ENSPEMG00000019845	Trnt1	75	72.973	Peromyscus_maniculatus_bairdii
ENSTBEG00000006367	TRNT1	94	66.897	ENSPCIG00000030436	TRNT1	67	66.897	Phascolarctos_cinereus
ENSTBEG00000006367	TRNT1	80	60.996	ENSPFOG00000006194	trnt1	56	60.996	Poecilia_formosa
ENSTBEG00000006367	TRNT1	80	60.996	ENSPLAG00000015623	trnt1	59	60.504	Poecilia_latipinna
ENSTBEG00000006367	TRNT1	80	60.996	ENSPMEG00000012216	trnt1	59	60.504	Poecilia_mexicana
ENSTBEG00000006367	TRNT1	81	59.184	ENSPREG00000021470	trnt1	58	59.184	Poecilia_reticulata
ENSTBEG00000006367	TRNT1	100	78.652	ENSPPYG00000013702	TRNT1	70	78.652	Pongo_abelii
ENSTBEG00000006367	TRNT1	83	74.654	ENSPCAG00000001951	TRNT1	66	74.654	Procavia_capensis
ENSTBEG00000006367	TRNT1	100	78.277	ENSPCOG00000022228	TRNT1	70	78.277	Propithecus_coquereli
ENSTBEG00000006367	TRNT1	83	75.576	ENSPVAG00000008784	TRNT1	66	75.576	Pteropus_vampyrus
ENSTBEG00000006367	TRNT1	86	60.076	ENSPNYG00000003120	trnt1	61	60.076	Pundamilia_nyererei
ENSTBEG00000006367	TRNT1	86	60.076	ENSPNAG00000000565	trnt1	61	60.076	Pygocentrus_nattereri
ENSTBEG00000006367	TRNT1	100	72.973	ENSRNOG00000006432	Trnt1	75	72.973	Rattus_norvegicus
ENSTBEG00000006367	TRNT1	100	68.182	ENSRBIG00000042632	TRNT1	83	68.182	Rhinopithecus_bieti
ENSTBEG00000006367	TRNT1	100	79.775	ENSRROG00000036866	TRNT1	70	79.775	Rhinopithecus_roxellana
ENSTBEG00000006367	TRNT1	100	78.277	ENSSBOG00000021208	TRNT1	70	78.277	Saimiri_boliviensis_boliviensis
ENSTBEG00000006367	TRNT1	100	65.172	ENSSHAG00000018861	TRNT1	75	65.172	Sarcophilus_harrisii
ENSTBEG00000006367	TRNT1	86	58.333	ENSSFOG00015020844	trnt1	61	58.333	Scleropages_formosus
ENSTBEG00000006367	TRNT1	86	58.846	ENSSMAG00000015432	trnt1	60	58.846	Scophthalmus_maximus
ENSTBEG00000006367	TRNT1	85	59.231	ENSSDUG00000012320	trnt1	61	59.231	Seriola_dumerili
ENSTBEG00000006367	TRNT1	51	51.613	ENSSLDG00000016463	-	58	51.634	Seriola_lalandi_dorsalis
ENSTBEG00000006367	TRNT1	85	59.231	ENSSLDG00000009325	trnt1	61	59.231	Seriola_lalandi_dorsalis
ENSTBEG00000006367	TRNT1	83	68.203	ENSSPUG00000014153	TRNT1	66	68.203	Sphenodon_punctatus
ENSTBEG00000006367	TRNT1	86	57.308	ENSSPAG00000021005	trnt1	61	57.308	Stegastes_partitus
ENSTBEG00000006367	TRNT1	100	75.655	ENSSSCG00000011529	TRNT1	71	75.655	Sus_scrofa
ENSTBEG00000006367	TRNT1	87	60.741	ENSTGUG00000010192	TRNT1	67	60.741	Taeniopygia_guttata
ENSTBEG00000006367	TRNT1	86	60.000	ENSTRUG00000001088	trnt1	61	60.000	Takifugu_rubripes
ENSTBEG00000006367	TRNT1	88	59.023	ENSTNIG00000007363	trnt1	61	59.023	Tetraodon_nigroviridis
ENSTBEG00000006367	TRNT1	100	74.157	ENSTTRG00000007803	TRNT1	70	74.157	Tursiops_truncatus
ENSTBEG00000006367	TRNT1	100	77.903	ENSUAMG00000022574	TRNT1	70	77.903	Ursus_americanus
ENSTBEG00000006367	TRNT1	100	77.903	ENSUMAG00000024092	TRNT1	70	77.903	Ursus_maritimus
ENSTBEG00000006367	TRNT1	50	67.320	ENSVPAG00000008096	-	68	67.320	Vicugna_pacos
ENSTBEG00000006367	TRNT1	100	77.154	ENSVVUG00000012810	TRNT1	74	77.154	Vulpes_vulpes
ENSTBEG00000006367	TRNT1	83	56.349	ENSXETG00000025091	trnt1	59	57.563	Xenopus_tropicalis
ENSTBEG00000006367	TRNT1	80	62.241	ENSXCOG00000010150	trnt1	57	62.241	Xiphophorus_couchianus
ENSTBEG00000006367	TRNT1	80	61.411	ENSXMAG00000002227	trnt1	57	61.411	Xiphophorus_maculatus