EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTBEG00000006405 (Gene tree)
Gene ID: -
Gene Symbol: APEX1
Alias: APE|APE-1|APEN|APEX|APX|HAP1|REF-1|REF1
Full Name: apurinic/apyrimidinic endodeoxyribonuclease 1
Gene Type: protein_coding
Species: Tupaia_belangeri
Status: putative
Strand: Plus strand
Length: 2617 bases
Position: chrGeneScaffold_2517:255018-257634
Accession: 587
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTBEP00000005514	Exo_endo_phos	PF03372.23	2.2e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTBET00000006401	APEX1-201	951	-	ENSTBEP00000005514	316 (aa)	-	UPI0000F5FC3F

Gene Model

Click here to download ENSTBEG00000006405's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTBEG00000006405's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTBEG00000006405	APEX1	100	91.824	ENSG00000100823	APEX1	100	91.824	Homo_sapiens
ENSTBEG00000006405	APEX1	88	66.667	ENSAPOG00000017002	apex1	91	66.667	Acanthochromis_polyacanthus
ENSTBEG00000006405	APEX1	100	92.453	ENSAMEG00000005418	APEX1	100	92.453	Ailuropoda_melanoleuca
ENSTBEG00000006405	APEX1	87	68.231	ENSACIG00000010653	apex1	94	68.100	Amphilophus_citrinellus
ENSTBEG00000006405	APEX1	88	66.667	ENSAOCG00000009649	apex1	90	66.667	Amphiprion_ocellaris
ENSTBEG00000006405	APEX1	88	66.667	ENSAPEG00000021453	apex1	90	66.667	Amphiprion_percula
ENSTBEG00000006405	APEX1	99	64.241	ENSATEG00000002883	apex1	97	64.241	Anabas_testudineus
ENSTBEG00000006405	APEX1	100	67.702	ENSACAG00000008099	APEX1	100	67.702	Anolis_carolinensis
ENSTBEG00000006405	APEX1	100	91.509	ENSANAG00000030117	APEX1	100	91.509	Aotus_nancymaae
ENSTBEG00000006405	APEX1	86	68.364	ENSACLG00000018441	apex1	99	63.608	Astatotilapia_calliptera
ENSTBEG00000006405	APEX1	100	63.438	ENSAMXG00000034699	apex1	100	62.500	Astyanax_mexicanus
ENSTBEG00000006405	APEX1	100	91.824	ENSBTAG00000002745	APEX1	100	91.824	Bos_taurus
ENSTBEG00000006405	APEX1	80	44.186	WBGene00001372	exo-3	88	44.531	Caenorhabditis_elegans
ENSTBEG00000006405	APEX1	100	92.138	ENSCJAG00000009726	APEX1	100	92.138	Callithrix_jacchus
ENSTBEG00000006405	APEX1	100	91.509	ENSCAFG00000032033	APEX1	100	91.509	Canis_familiaris
ENSTBEG00000006405	APEX1	54	87.791	ENSCAFG00020023002	-	96	87.791	Canis_lupus_dingo
ENSTBEG00000006405	APEX1	100	91.509	ENSCAFG00020014377	-	100	91.509	Canis_lupus_dingo
ENSTBEG00000006405	APEX1	98	73.397	ENSCHIG00000014537	-	99	73.397	Capra_hircus
ENSTBEG00000006405	APEX1	100	91.195	ENSCHIG00000007298	-	100	91.195	Capra_hircus
ENSTBEG00000006405	APEX1	100	90.566	ENSTSYG00000034813	APEX1	100	90.566	Carlito_syrichta
ENSTBEG00000006405	APEX1	84	83.764	ENSCAPG00000016235	APEX1	90	91.915	Cavia_aperea
ENSTBEG00000006405	APEX1	100	90.881	ENSCPOG00000030909	APEX1	100	90.881	Cavia_porcellus
ENSTBEG00000006405	APEX1	100	92.138	ENSCCAG00000033056	-	100	92.138	Cebus_capucinus
ENSTBEG00000006405	APEX1	100	81.329	ENSCCAG00000031931	-	100	81.329	Cebus_capucinus
ENSTBEG00000006405	APEX1	100	91.509	ENSCATG00000015580	APEX1	100	91.509	Cercocebus_atys
ENSTBEG00000006405	APEX1	100	91.195	ENSCLAG00000001002	APEX1	100	91.195	Chinchilla_lanigera
ENSTBEG00000006405	APEX1	100	91.195	ENSCSAG00000016670	-	100	91.195	Chlorocebus_sabaeus
ENSTBEG00000006405	APEX1	100	91.195	ENSCSAG00000016685	-	100	91.195	Chlorocebus_sabaeus
ENSTBEG00000006405	APEX1	100	68.966	ENSCPBG00000009567	APEX1	100	68.966	Chrysemys_picta_bellii
ENSTBEG00000006405	APEX1	83	56.981	ENSCING00000008137	-	84	56.981	Ciona_intestinalis
ENSTBEG00000006405	APEX1	83	50.566	ENSCSAVG00000007144	-	100	51.351	Ciona_savignyi
ENSTBEG00000006405	APEX1	100	91.509	ENSCANG00000030726	APEX1	100	91.509	Colobus_angolensis_palliatus
ENSTBEG00000006405	APEX1	100	88.365	ENSCGRG00001017046	Apex1	100	88.365	Cricetulus_griseus_chok1gshd
ENSTBEG00000006405	APEX1	100	88.365	ENSCGRG00000008984	Apex1	100	88.365	Cricetulus_griseus_crigri
ENSTBEG00000006405	APEX1	99	61.006	ENSCSEG00000017499	apex1	99	61.006	Cynoglossus_semilaevis
ENSTBEG00000006405	APEX1	99	63.608	ENSCVAG00000022075	apex1	99	63.608	Cyprinodon_variegatus
ENSTBEG00000006405	APEX1	100	63.522	ENSDARG00000045843	apex1	100	62.928	Danio_rerio
ENSTBEG00000006405	APEX1	100	85.849	ENSDNOG00000042234	APEX1	95	85.849	Dasypus_novemcinctus
ENSTBEG00000006405	APEX1	100	91.195	ENSDORG00000001616	Apex1	100	91.195	Dipodomys_ordii
ENSTBEG00000006405	APEX1	100	90.881	ENSETEG00000004855	-	100	90.881	Echinops_telfairi
ENSTBEG00000006405	APEX1	75	61.506	ENSEBUG00000000622	-	92	61.506	Eptatretus_burgeri
ENSTBEG00000006405	APEX1	100	92.767	ENSEASG00005017489	APEX1	74	92.767	Equus_asinus_asinus
ENSTBEG00000006405	APEX1	100	92.767	ENSECAG00000022325	APEX1	82	92.767	Equus_caballus
ENSTBEG00000006405	APEX1	91	89.931	ENSEEUG00000012569	APEX1	100	89.931	Erinaceus_europaeus
ENSTBEG00000006405	APEX1	100	61.950	ENSELUG00000021706	apex1	100	62.893	Esox_lucius
ENSTBEG00000006405	APEX1	100	92.767	ENSFCAG00000030869	APEX1	100	92.767	Felis_catus
ENSTBEG00000006405	APEX1	100	90.566	ENSFDAG00000006120	APEX1	100	90.566	Fukomys_damarensis
ENSTBEG00000006405	APEX1	99	64.873	ENSFHEG00000009031	apex1	83	64.873	Fundulus_heteroclitus
ENSTBEG00000006405	APEX1	99	58.621	ENSGMOG00000007943	apex1	99	58.861	Gadus_morhua
ENSTBEG00000006405	APEX1	88	68.817	ENSGAFG00000005311	apex1	99	64.241	Gambusia_affinis
ENSTBEG00000006405	APEX1	99	62.342	ENSGACG00000019497	apex1	99	65.789	Gasterosteus_aculeatus
ENSTBEG00000006405	APEX1	100	68.966	ENSGAGG00000014999	APEX1	100	68.966	Gopherus_agassizii
ENSTBEG00000006405	APEX1	100	92.138	ENSGGOG00000002128	APEX1	100	92.138	Gorilla_gorilla
ENSTBEG00000006405	APEX1	99	62.658	ENSHBUG00000005894	apex1	99	63.291	Haplochromis_burtoni
ENSTBEG00000006405	APEX1	100	91.509	ENSHGLG00000002848	APEX1	100	91.509	Heterocephalus_glaber_female
ENSTBEG00000006405	APEX1	100	91.509	ENSHGLG00100017878	APEX1	100	91.509	Heterocephalus_glaber_male
ENSTBEG00000006405	APEX1	99	63.522	ENSHCOG00000009961	apex1	99	62.579	Hippocampus_comes
ENSTBEG00000006405	APEX1	100	65.517	ENSIPUG00000005799	apex1	100	64.577	Ictalurus_punctatus
ENSTBEG00000006405	APEX1	100	91.195	ENSSTOG00000010096	APEX1	100	91.195	Ictidomys_tridecemlineatus
ENSTBEG00000006405	APEX1	100	77.848	ENSJJAG00000020465	-	96	81.081	Jaculus_jaculus
ENSTBEG00000006405	APEX1	100	82.075	ENSJJAG00000003660	-	100	82.075	Jaculus_jaculus
ENSTBEG00000006405	APEX1	100	90.566	ENSJJAG00000012067	-	100	90.566	Jaculus_jaculus
ENSTBEG00000006405	APEX1	99	63.608	ENSKMAG00000021171	apex1	99	63.608	Kryptolebias_marmoratus
ENSTBEG00000006405	APEX1	88	65.591	ENSLBEG00000010248	apex1	99	61.076	Labrus_bergylta
ENSTBEG00000006405	APEX1	100	65.000	ENSLACG00000008617	APEX1	100	64.780	Latimeria_chalumnae
ENSTBEG00000006405	APEX1	100	64.596	ENSLOCG00000015516	apex1	99	63.836	Lepisosteus_oculatus
ENSTBEG00000006405	APEX1	100	89.937	ENSLAFG00000021872	APEX1	100	89.937	Loxodonta_africana
ENSTBEG00000006405	APEX1	100	91.509	ENSMFAG00000002565	APEX1	100	91.509	Macaca_fascicularis
ENSTBEG00000006405	APEX1	100	91.509	ENSMMUG00000048039	APEX1	100	91.509	Macaca_mulatta
ENSTBEG00000006405	APEX1	100	91.509	ENSMNEG00000036944	APEX1	100	91.509	Macaca_nemestrina
ENSTBEG00000006405	APEX1	100	91.509	ENSMLEG00000042125	APEX1	100	91.509	Mandrillus_leucophaeus
ENSTBEG00000006405	APEX1	99	63.924	ENSMAMG00000023526	apex1	99	63.924	Mastacembelus_armatus
ENSTBEG00000006405	APEX1	86	68.364	ENSMZEG00005014187	apex1	99	63.608	Maylandia_zebra
ENSTBEG00000006405	APEX1	100	88.679	ENSMAUG00000013994	Apex1	100	88.679	Mesocricetus_auratus
ENSTBEG00000006405	APEX1	100	92.138	ENSMICG00000043554	APEX1	100	92.138	Microcebus_murinus
ENSTBEG00000006405	APEX1	100	88.365	ENSMOCG00000013721	Apex1	100	88.365	Microtus_ochrogaster
ENSTBEG00000006405	APEX1	88	65.000	ENSMMOG00000010031	apex1	87	65.000	Mola_mola
ENSTBEG00000006405	APEX1	100	80.625	ENSMODG00000007125	APEX1	100	80.938	Monodelphis_domestica
ENSTBEG00000006405	APEX1	88	60.932	ENSMALG00000011699	apex1	75	60.932	Monopterus_albus
ENSTBEG00000006405	APEX1	99	90.852	MGP_CAROLIEiJ_G0019209	Apex1	99	90.852	Mus_caroli
ENSTBEG00000006405	APEX1	100	90.881	ENSMUSG00000035960	Apex1	100	90.881	Mus_musculus
ENSTBEG00000006405	APEX1	100	91.509	MGP_PahariEiJ_G0030232	Apex1	100	91.509	Mus_pahari
ENSTBEG00000006405	APEX1	100	90.881	MGP_SPRETEiJ_G0020101	Apex1	100	90.881	Mus_spretus
ENSTBEG00000006405	APEX1	100	90.938	ENSMLUG00000028957	APEX1	100	90.938	Myotis_lucifugus
ENSTBEG00000006405	APEX1	100	89.308	ENSNGAG00000002725	-	100	89.308	Nannospalax_galili
ENSTBEG00000006405	APEX1	99	67.290	ENSNGAG00000021748	-	100	67.290	Nannospalax_galili
ENSTBEG00000006405	APEX1	86	68.000	ENSNBRG00000005334	apex1	91	63.291	Neolamprologus_brichardi
ENSTBEG00000006405	APEX1	100	91.824	ENSNLEG00000010839	APEX1	100	91.824	Nomascus_leucogenys
ENSTBEG00000006405	APEX1	100	83.333	ENSMEUG00000014519	APEX1	100	81.818	Notamacropus_eugenii
ENSTBEG00000006405	APEX1	100	90.881	ENSOPRG00000014029	APEX1	100	90.252	Ochotona_princeps
ENSTBEG00000006405	APEX1	100	91.195	ENSODEG00000001703	-	100	91.195	Octodon_degus
ENSTBEG00000006405	APEX1	100	70.186	ENSODEG00000006583	-	100	70.186	Octodon_degus
ENSTBEG00000006405	APEX1	97	73.139	ENSODEG00000004777	-	99	73.139	Octodon_degus
ENSTBEG00000006405	APEX1	87	68.231	ENSONIG00000012089	apex1	99	63.608	Oreochromis_niloticus
ENSTBEG00000006405	APEX1	90	78.947	ENSOANG00000008836	APEX1	80	74.383	Ornithorhynchus_anatinus
ENSTBEG00000006405	APEX1	100	91.509	ENSOCUG00000005022	APEX1	100	91.509	Oryctolagus_cuniculus
ENSTBEG00000006405	APEX1	99	64.151	ENSORLG00000012378	apex1	99	64.151	Oryzias_latipes
ENSTBEG00000006405	APEX1	99	64.151	ENSORLG00020021371	apex1	99	64.151	Oryzias_latipes_hni
ENSTBEG00000006405	APEX1	99	64.151	ENSORLG00015020089	apex1	99	64.151	Oryzias_latipes_hsok
ENSTBEG00000006405	APEX1	99	63.522	ENSOMEG00000018876	apex1	99	63.522	Oryzias_melastigma
ENSTBEG00000006405	APEX1	98	80.769	ENSOGAG00000029355	-	100	80.769	Otolemur_garnettii
ENSTBEG00000006405	APEX1	100	91.195	ENSOGAG00000013335	-	100	91.195	Otolemur_garnettii
ENSTBEG00000006405	APEX1	100	90.252	ENSOARG00000019740	-	100	90.252	Ovis_aries
ENSTBEG00000006405	APEX1	97	87.338	ENSOARG00000001876	-	100	87.338	Ovis_aries
ENSTBEG00000006405	APEX1	99	77.215	ENSOARG00000014424	-	100	77.215	Ovis_aries
ENSTBEG00000006405	APEX1	100	92.138	ENSPPAG00000038760	APEX1	100	92.138	Pan_paniscus
ENSTBEG00000006405	APEX1	100	92.453	ENSPPRG00000011794	APEX1	100	92.453	Panthera_pardus
ENSTBEG00000006405	APEX1	100	92.767	ENSPTIG00000014829	APEX1	100	92.767	Panthera_tigris_altaica
ENSTBEG00000006405	APEX1	100	92.138	ENSPTRG00000006093	APEX1	100	92.138	Pan_troglodytes
ENSTBEG00000006405	APEX1	100	91.509	ENSPANG00000022757	APEX1	100	91.509	Papio_anubis
ENSTBEG00000006405	APEX1	87	65.343	ENSPKIG00000003504	apex1	100	61.371	Paramormyrops_kingsleyae
ENSTBEG00000006405	APEX1	76	62.963	ENSPMGG00000016596	apex1	73	62.963	Periophthalmus_magnuspinnatus
ENSTBEG00000006405	APEX1	100	89.937	ENSPEMG00000019097	Apex1	100	89.937	Peromyscus_maniculatus_bairdii
ENSTBEG00000006405	APEX1	94	64.120	ENSPMAG00000007275	-	95	65.480	Petromyzon_marinus
ENSTBEG00000006405	APEX1	100	80.878	ENSPCIG00000023274	APEX1	100	83.178	Phascolarctos_cinereus
ENSTBEG00000006405	APEX1	88	69.176	ENSPFOG00000004178	apex1	99	64.241	Poecilia_formosa
ENSTBEG00000006405	APEX1	88	68.817	ENSPLAG00000012779	apex1	99	63.924	Poecilia_latipinna
ENSTBEG00000006405	APEX1	88	69.176	ENSPMEG00000019623	apex1	99	64.241	Poecilia_mexicana
ENSTBEG00000006405	APEX1	88	68.817	ENSPREG00000014298	apex1	99	63.924	Poecilia_reticulata
ENSTBEG00000006405	APEX1	100	91.824	ENSPPYG00000005565	APEX1	100	91.824	Pongo_abelii
ENSTBEG00000006405	APEX1	100	87.421	ENSPCAG00000010376	APEX1	100	87.421	Procavia_capensis
ENSTBEG00000006405	APEX1	100	92.138	ENSPCOG00000021564	APEX1	100	92.138	Propithecus_coquereli
ENSTBEG00000006405	APEX1	100	91.875	ENSPVAG00000010736	APEX1	100	91.875	Pteropus_vampyrus
ENSTBEG00000006405	APEX1	86	68.364	ENSPNYG00000023940	apex1	99	63.608	Pundamilia_nyererei
ENSTBEG00000006405	APEX1	96	61.889	ENSPNAG00000020897	apex1	96	62.373	Pygocentrus_nattereri
ENSTBEG00000006405	APEX1	100	90.252	ENSRNOG00000009663	Apex1	100	90.252	Rattus_norvegicus
ENSTBEG00000006405	APEX1	100	91.824	ENSRBIG00000038325	APEX1	99	91.824	Rhinopithecus_bieti
ENSTBEG00000006405	APEX1	100	91.824	ENSSBOG00000018921	-	100	91.824	Saimiri_boliviensis_boliviensis
ENSTBEG00000006405	APEX1	100	77.044	ENSSBOG00000031372	-	100	76.825	Saimiri_boliviensis_boliviensis
ENSTBEG00000006405	APEX1	100	79.630	ENSSHAG00000013524	APEX1	100	79.630	Sarcophilus_harrisii
ENSTBEG00000006405	APEX1	100	59.748	ENSSFOG00015001948	apex1	100	59.119	Scleropages_formosus
ENSTBEG00000006405	APEX1	87	65.827	ENSSMAG00000013348	apex1	99	62.461	Scophthalmus_maximus
ENSTBEG00000006405	APEX1	99	62.342	ENSSDUG00000016377	apex1	99	62.342	Seriola_dumerili
ENSTBEG00000006405	APEX1	99	62.975	ENSSLDG00000023005	apex1	99	62.975	Seriola_lalandi_dorsalis
ENSTBEG00000006405	APEX1	90	71.228	ENSSPUG00000000531	APEX1	95	71.127	Sphenodon_punctatus
ENSTBEG00000006405	APEX1	99	62.658	ENSSPAG00000000458	apex1	99	62.658	Stegastes_partitus
ENSTBEG00000006405	APEX1	100	51.852	ENSSSCG00000039705	-	96	52.903	Sus_scrofa
ENSTBEG00000006405	APEX1	100	90.881	ENSSSCG00000040060	-	100	90.881	Sus_scrofa
ENSTBEG00000006405	APEX1	74	57.021	ENSTGUG00000014378	APEX1	99	57.021	Taeniopygia_guttata
ENSTBEG00000006405	APEX1	87	64.621	ENSTRUG00000004268	apex1	95	60.443	Takifugu_rubripes
ENSTBEG00000006405	APEX1	99	61.076	ENSTNIG00000005778	apex1	99	61.076	Tetraodon_nigroviridis
ENSTBEG00000006405	APEX1	74	91.064	ENSTTRG00000007860	APEX1	99	91.064	Tursiops_truncatus
ENSTBEG00000006405	APEX1	100	92.138	ENSUAMG00000010457	APEX1	100	92.138	Ursus_americanus
ENSTBEG00000006405	APEX1	100	92.138	ENSUMAG00000009178	APEX1	100	92.138	Ursus_maritimus
ENSTBEG00000006405	APEX1	74	85.957	ENSVPAG00000005083	APEX1	99	85.957	Vicugna_pacos
ENSTBEG00000006405	APEX1	100	90.881	ENSVVUG00000009010	APEX1	100	90.881	Vulpes_vulpes
ENSTBEG00000006405	APEX1	100	65.109	ENSXETG00000024773	apex1	100	65.109	Xenopus_tropicalis
ENSTBEG00000006405	APEX1	88	68.817	ENSXCOG00000015233	apex1	99	64.557	Xiphophorus_couchianus
ENSTBEG00000006405	APEX1	93	64.821	ENSXMAG00000006195	apex1	99	64.557	Xiphophorus_maculatus