EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTBEG00000007092 (Gene tree)
Gene ID: -
Gene Symbol: RAB5C
Alias: RAB5CL|RABL
Full Name: RAB5C%2C member RAS oncogene family
Gene Type: protein_coding
Species: Tupaia_belangeri
Status: putative
Strand: Minus strand
Length: 10282 bases
Position: chrGeneScaffold_4198:144977-155258
Accession: 9785
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTBEP00000006129	MMR_HSR1	PF01926.23	6.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTBET00000007087	RAB5C-201	651	-	ENSTBEP00000006129	216 (aa)	-	UPI0000F5F31F

Gene Model

Click here to download ENSTBEG00000007092's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTBEG00000007092's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTBEG00000007092	RAB5C	75	45.963	ENSTBEG00000004142	RAB25	68	45.963
ENSTBEG00000007092	RAB5C	60	49.612	ENSTBEG00000014750	-	100	49.612
ENSTBEG00000007092	RAB5C	75	39.759	ENSTBEG00000009702	RAB33A	70	39.759
ENSTBEG00000007092	RAB5C	89	34.848	ENSTBEG00000006468	RAB9B	97	34.848
ENSTBEG00000007092	RAB5C	89	38.021	ENSTBEG00000012734	-	95	38.021
ENSTBEG00000007092	RAB5C	75	36.585	ENSTBEG00000008074	RAB39B	77	36.585
ENSTBEG00000007092	RAB5C	78	42.012	ENSTBEG00000009832	RAB30	83	42.012
ENSTBEG00000007092	RAB5C	62	37.594	ENSTBEG00000015207	RAB3A	85	37.594
ENSTBEG00000007092	RAB5C	73	31.250	ENSTBEG00000005193	RAB34	62	31.250

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTBEG00000007092	RAB5C	100	99.537	ENSG00000108774	RAB5C	100	100.000	Homo_sapiens
ENSTBEG00000007092	RAB5C	99	89.302	ENSAPOG00000016864	rab5c	98	91.163	Acanthochromis_polyacanthus
ENSTBEG00000007092	RAB5C	100	99.074	ENSAMEG00000006003	RAB5C	100	99.074	Ailuropoda_melanoleuca
ENSTBEG00000007092	RAB5C	99	88.889	ENSACIG00000010896	rab5c	98	90.278	Amphilophus_citrinellus
ENSTBEG00000007092	RAB5C	99	89.352	ENSAOCG00000016614	rab5c	98	91.204	Amphiprion_ocellaris
ENSTBEG00000007092	RAB5C	97	89.100	ENSAPEG00000017868	-	97	90.995	Amphiprion_percula
ENSTBEG00000007092	RAB5C	100	89.450	ENSATEG00000001937	rab5c	100	90.826	Anabas_testudineus
ENSTBEG00000007092	RAB5C	94	99.020	ENSANAG00000025390	RAB5C	100	99.020	Aotus_nancymaae
ENSTBEG00000007092	RAB5C	96	89.100	ENSACLG00000008615	-	99	88.584	Astatotilapia_calliptera
ENSTBEG00000007092	RAB5C	99	87.963	ENSACLG00000002706	rab5c	98	90.278	Astatotilapia_calliptera
ENSTBEG00000007092	RAB5C	96	88.571	ENSAMXG00000037267	-	99	90.952	Astyanax_mexicanus
ENSTBEG00000007092	RAB5C	99	89.862	ENSAMXG00000043717	rab5c	98	91.244	Astyanax_mexicanus
ENSTBEG00000007092	RAB5C	100	99.074	ENSBTAG00000006982	RAB5C	100	99.074	Bos_taurus
ENSTBEG00000007092	RAB5C	99	75.349	WBGene00004268	rab-5	99	75.349	Caenorhabditis_elegans
ENSTBEG00000007092	RAB5C	100	98.611	ENSCAFG00000015629	RAB5C	100	98.611	Canis_familiaris
ENSTBEG00000007092	RAB5C	100	98.611	ENSCAFG00020013537	RAB5C	100	98.611	Canis_lupus_dingo
ENSTBEG00000007092	RAB5C	100	99.074	ENSCHIG00000012960	RAB5C	100	99.074	Capra_hircus
ENSTBEG00000007092	RAB5C	100	99.537	ENSTSYG00000030531	RAB5C	100	99.537	Carlito_syrichta
ENSTBEG00000007092	RAB5C	100	98.611	ENSCCAG00000025940	RAB5C	100	98.611	Cebus_capucinus
ENSTBEG00000007092	RAB5C	100	99.537	ENSCATG00000040873	RAB5C	100	99.537	Cercocebus_atys
ENSTBEG00000007092	RAB5C	100	97.222	ENSCLAG00000016650	RAB5C	100	97.222	Chinchilla_lanigera
ENSTBEG00000007092	RAB5C	82	99.438	ENSCHOG00000009886	RAB5C	100	99.438	Choloepus_hoffmanni
ENSTBEG00000007092	RAB5C	99	76.168	ENSCING00000003340	-	99	76.168	Ciona_intestinalis
ENSTBEG00000007092	RAB5C	99	75.000	ENSCSAVG00000000613	-	99	83.333	Ciona_savignyi
ENSTBEG00000007092	RAB5C	100	98.611	ENSCGRG00001014226	Rab5c	100	98.611	Cricetulus_griseus_chok1gshd
ENSTBEG00000007092	RAB5C	100	98.611	ENSCGRG00000007534	Rab5c	100	98.611	Cricetulus_griseus_crigri
ENSTBEG00000007092	RAB5C	99	90.741	ENSCSEG00000017024	rab5c	98	90.741	Cynoglossus_semilaevis
ENSTBEG00000007092	RAB5C	99	89.352	ENSCVAG00000009550	rab5c	98	90.741	Cyprinodon_variegatus
ENSTBEG00000007092	RAB5C	100	98.611	ENSDNOG00000038853	RAB5C	100	98.611	Dasypus_novemcinctus
ENSTBEG00000007092	RAB5C	100	98.611	ENSDORG00000006819	Rab5c	100	98.611	Dipodomys_ordii
ENSTBEG00000007092	RAB5C	99	74.648	FBgn0014010	Rab5	95	74.648	Drosophila_melanogaster
ENSTBEG00000007092	RAB5C	99	79.535	ENSEBUG00000014794	rab5c	100	79.535	Eptatretus_burgeri
ENSTBEG00000007092	RAB5C	100	99.074	ENSEASG00005009281	RAB5C	100	99.074	Equus_asinus_asinus
ENSTBEG00000007092	RAB5C	100	99.537	ENSECAG00000025054	RAB5C	100	99.537	Equus_caballus
ENSTBEG00000007092	RAB5C	100	99.074	ENSEEUG00000002790	RAB5C	100	99.074	Erinaceus_europaeus
ENSTBEG00000007092	RAB5C	99	88.426	ENSELUG00000010439	-	98	88.426	Esox_lucius
ENSTBEG00000007092	RAB5C	99	87.963	ENSELUG00000018516	rab5c	99	89.815	Esox_lucius
ENSTBEG00000007092	RAB5C	100	99.074	ENSFCAG00000002148	RAB5C	100	99.074	Felis_catus
ENSTBEG00000007092	RAB5C	100	95.370	ENSFDAG00000021541	RAB5C	100	95.370	Fukomys_damarensis
ENSTBEG00000007092	RAB5C	99	90.783	ENSFHEG00000015268	-	99	90.783	Fundulus_heteroclitus
ENSTBEG00000007092	RAB5C	99	89.352	ENSFHEG00000012117	rab5c	98	90.741	Fundulus_heteroclitus
ENSTBEG00000007092	RAB5C	78	88.166	ENSGMOG00000001876	-	98	88.166	Gadus_morhua
ENSTBEG00000007092	RAB5C	99	87.963	ENSGMOG00000015096	rab5c	98	90.278	Gadus_morhua
ENSTBEG00000007092	RAB5C	99	89.815	ENSGAFG00000000884	rab5c	98	91.204	Gambusia_affinis
ENSTBEG00000007092	RAB5C	96	90.952	ENSGAFG00000003642	-	99	88.182	Gambusia_affinis
ENSTBEG00000007092	RAB5C	87	94.681	ENSGACG00000008659	rab5c	98	86.574	Gasterosteus_aculeatus
ENSTBEG00000007092	RAB5C	100	99.537	ENSGGOG00000005472	RAB5C	100	99.537	Gorilla_gorilla
ENSTBEG00000007092	RAB5C	99	87.963	ENSHBUG00000002014	rab5c	98	90.278	Haplochromis_burtoni
ENSTBEG00000007092	RAB5C	96	89.100	ENSHBUG00000006823	-	99	88.584	Haplochromis_burtoni
ENSTBEG00000007092	RAB5C	100	94.907	ENSHGLG00000012067	RAB5C	100	94.907	Heterocephalus_glaber_female
ENSTBEG00000007092	RAB5C	99	89.862	ENSHCOG00000004662	rab5c	97	90.783	Hippocampus_comes
ENSTBEG00000007092	RAB5C	97	82.075	ENSHCOG00000020238	-	100	80.455	Hippocampus_comes
ENSTBEG00000007092	RAB5C	96	88.095	ENSIPUG00000020082	rab5c	98	88.991	Ictalurus_punctatus
ENSTBEG00000007092	RAB5C	100	97.685	ENSSTOG00000006620	RAB5C	100	97.685	Ictidomys_tridecemlineatus
ENSTBEG00000007092	RAB5C	100	99.074	ENSJJAG00000021181	Rab5c	100	99.074	Jaculus_jaculus
ENSTBEG00000007092	RAB5C	99	88.018	ENSKMAG00000017417	-	99	88.018	Kryptolebias_marmoratus
ENSTBEG00000007092	RAB5C	99	88.889	ENSKMAG00000020038	rab5c	98	90.741	Kryptolebias_marmoratus
ENSTBEG00000007092	RAB5C	100	87.615	ENSLBEG00000010408	-	99	87.615	Labrus_bergylta
ENSTBEG00000007092	RAB5C	99	90.278	ENSLBEG00000004128	rab5c	98	91.667	Labrus_bergylta
ENSTBEG00000007092	RAB5C	99	93.458	ENSLOCG00000012566	rab5c	100	93.458	Lepisosteus_oculatus
ENSTBEG00000007092	RAB5C	100	99.537	ENSMFAG00000039627	RAB5C	100	99.537	Macaca_fascicularis
ENSTBEG00000007092	RAB5C	100	99.537	ENSMNEG00000000355	RAB5C	100	99.537	Macaca_nemestrina
ENSTBEG00000007092	RAB5C	99	88.426	ENSMAMG00000022322	rab5c	98	90.278	Mastacembelus_armatus
ENSTBEG00000007092	RAB5C	99	88.018	ENSMAMG00000016207	-	99	88.018	Mastacembelus_armatus
ENSTBEG00000007092	RAB5C	96	89.100	ENSMZEG00005021090	-	99	88.584	Maylandia_zebra
ENSTBEG00000007092	RAB5C	99	87.963	ENSMZEG00005022735	rab5c	98	90.278	Maylandia_zebra
ENSTBEG00000007092	RAB5C	100	99.074	ENSMAUG00000015005	Rab5c	100	99.074	Mesocricetus_auratus
ENSTBEG00000007092	RAB5C	100	99.074	ENSMICG00000041608	RAB5C	100	99.074	Microcebus_murinus
ENSTBEG00000007092	RAB5C	100	98.148	ENSMOCG00000018531	-	100	98.148	Microtus_ochrogaster
ENSTBEG00000007092	RAB5C	100	89.450	ENSMMOG00000020621	rab5c	99	89.450	Mola_mola
ENSTBEG00000007092	RAB5C	99	87.156	ENSMALG00000022348	-	99	87.156	Monopterus_albus
ENSTBEG00000007092	RAB5C	97	84.360	ENSMALG00000006052	rab5c	96	84.186	Monopterus_albus
ENSTBEG00000007092	RAB5C	100	98.611	MGP_CAROLIEiJ_G0017184	Rab5c	100	98.611	Mus_caroli
ENSTBEG00000007092	RAB5C	100	98.611	ENSMUSG00000019173	Rab5c	100	98.611	Mus_musculus
ENSTBEG00000007092	RAB5C	100	98.611	MGP_PahariEiJ_G0018314	Rab5c	100	98.611	Mus_pahari
ENSTBEG00000007092	RAB5C	100	98.611	MGP_SPRETEiJ_G0018027	Rab5c	100	98.611	Mus_spretus
ENSTBEG00000007092	RAB5C	100	99.074	ENSMPUG00000010554	RAB5C	100	99.074	Mustela_putorius_furo
ENSTBEG00000007092	RAB5C	100	98.148	ENSNGAG00000010286	Rab5c	100	98.148	Nannospalax_galili
ENSTBEG00000007092	RAB5C	96	89.100	ENSNBRG00000016922	-	99	88.584	Neolamprologus_brichardi
ENSTBEG00000007092	RAB5C	99	88.889	ENSNBRG00000018165	rab5c	98	91.204	Neolamprologus_brichardi
ENSTBEG00000007092	RAB5C	82	92.697	ENSOPRG00000008255	RAB5C	100	92.697	Ochotona_princeps
ENSTBEG00000007092	RAB5C	100	96.296	ENSODEG00000017920	RAB5C	100	96.296	Octodon_degus
ENSTBEG00000007092	RAB5C	99	88.889	ENSONIG00000001113	rab5c	98	91.204	Oreochromis_niloticus
ENSTBEG00000007092	RAB5C	100	88.073	ENSORLG00000003882	rab5c	100	89.450	Oryzias_latipes
ENSTBEG00000007092	RAB5C	100	88.991	ENSORLG00020008388	rab5c	100	88.991	Oryzias_latipes_hni
ENSTBEG00000007092	RAB5C	100	88.073	ENSORLG00015021900	rab5c	100	89.450	Oryzias_latipes_hsok
ENSTBEG00000007092	RAB5C	100	88.073	ENSOMEG00000023078	rab5c	100	89.450	Oryzias_melastigma
ENSTBEG00000007092	RAB5C	100	99.074	ENSOGAG00000009456	RAB5C	100	99.074	Otolemur_garnettii
ENSTBEG00000007092	RAB5C	100	99.074	ENSOARG00000018768	RAB5C	100	99.074	Ovis_aries
ENSTBEG00000007092	RAB5C	100	99.537	ENSPPAG00000037206	RAB5C	100	99.537	Pan_paniscus
ENSTBEG00000007092	RAB5C	100	99.074	ENSPPRG00000005745	RAB5C	100	99.074	Panthera_pardus
ENSTBEG00000007092	RAB5C	100	99.074	ENSPTIG00000008177	RAB5C	100	99.074	Panthera_tigris_altaica
ENSTBEG00000007092	RAB5C	100	99.537	ENSPTRG00000009194	RAB5C	100	99.537	Pan_troglodytes
ENSTBEG00000007092	RAB5C	99	87.500	ENSPKIG00000020112	-	99	87.500	Paramormyrops_kingsleyae
ENSTBEG00000007092	RAB5C	99	89.302	ENSPKIG00000001237	-	99	89.302	Paramormyrops_kingsleyae
ENSTBEG00000007092	RAB5C	99	86.111	ENSPMGG00000010792	rab5c	97	89.573	Periophthalmus_magnuspinnatus
ENSTBEG00000007092	RAB5C	100	98.148	ENSPEMG00000017971	Rab5c	100	98.148	Peromyscus_maniculatus_bairdii
ENSTBEG00000007092	RAB5C	99	79.907	ENSPMAG00000007867	rab5c	99	79.907	Petromyzon_marinus
ENSTBEG00000007092	RAB5C	99	79.279	ENSPMAG00000000008	rab5c	100	79.279	Petromyzon_marinus
ENSTBEG00000007092	RAB5C	99	79.535	ENSPMAG00000001399	rab5c	100	79.535	Petromyzon_marinus
ENSTBEG00000007092	RAB5C	100	98.148	ENSPCIG00000020225	-	100	98.148	Phascolarctos_cinereus
ENSTBEG00000007092	RAB5C	99	89.815	ENSPLAG00000004790	rab5c	98	91.204	Poecilia_latipinna
ENSTBEG00000007092	RAB5C	99	89.862	ENSPLAG00000016333	-	99	89.862	Poecilia_latipinna
ENSTBEG00000007092	RAB5C	99	89.815	ENSPMEG00000011336	rab5c	98	91.204	Poecilia_mexicana
ENSTBEG00000007092	RAB5C	98	88.732	ENSPMEG00000012614	-	98	88.584	Poecilia_mexicana
ENSTBEG00000007092	RAB5C	99	89.815	ENSPREG00000010146	rab5c	98	91.204	Poecilia_reticulata
ENSTBEG00000007092	RAB5C	87	92.593	ENSPREG00000022167	-	89	93.989	Poecilia_reticulata
ENSTBEG00000007092	RAB5C	100	99.537	ENSPPYG00000008398	RAB5C	100	99.537	Pongo_abelii
ENSTBEG00000007092	RAB5C	100	98.148	ENSPCAG00000016412	RAB5C	100	98.148	Procavia_capensis
ENSTBEG00000007092	RAB5C	100	98.148	ENSPCOG00000026327	RAB5C	100	98.148	Propithecus_coquereli
ENSTBEG00000007092	RAB5C	100	99.537	ENSPVAG00000003867	RAB5C	100	99.537	Pteropus_vampyrus
ENSTBEG00000007092	RAB5C	99	87.963	ENSPNYG00000010615	rab5c	98	90.278	Pundamilia_nyererei
ENSTBEG00000007092	RAB5C	96	89.100	ENSPNYG00000015851	-	99	88.584	Pundamilia_nyererei
ENSTBEG00000007092	RAB5C	99	91.244	ENSPNAG00000028138	rab5c	98	91.244	Pygocentrus_nattereri
ENSTBEG00000007092	RAB5C	97	86.792	ENSPNAG00000002218	-	99	89.151	Pygocentrus_nattereri
ENSTBEG00000007092	RAB5C	100	99.074	ENSRNOG00000018568	Rab5c	100	99.074	Rattus_norvegicus
ENSTBEG00000007092	RAB5C	100	99.537	ENSRBIG00000031376	RAB5C	100	99.537	Rhinopithecus_bieti
ENSTBEG00000007092	RAB5C	100	99.537	ENSRROG00000032895	RAB5C	100	99.537	Rhinopithecus_roxellana
ENSTBEG00000007092	RAB5C	100	98.611	ENSSBOG00000032552	-	100	98.611	Saimiri_boliviensis_boliviensis
ENSTBEG00000007092	RAB5C	100	98.611	ENSSHAG00000005267	-	100	98.611	Sarcophilus_harrisii
ENSTBEG00000007092	RAB5C	99	87.097	ENSSFOG00015009988	-	99	87.097	Scleropages_formosus
ENSTBEG00000007092	RAB5C	96	91.827	ENSSMAG00000007323	rab5c	98	89.815	Scophthalmus_maximus
ENSTBEG00000007092	RAB5C	99	91.204	ENSSDUG00000023008	rab5c	98	91.204	Seriola_dumerili
ENSTBEG00000007092	RAB5C	99	90.741	ENSSLDG00000017771	rab5c	98	90.741	Seriola_lalandi_dorsalis
ENSTBEG00000007092	RAB5C	100	95.833	ENSSPUG00000012950	-	100	95.833	Sphenodon_punctatus
ENSTBEG00000007092	RAB5C	99	89.815	ENSSPAG00000006436	rab5c	98	92.130	Stegastes_partitus
ENSTBEG00000007092	RAB5C	100	99.074	ENSSSCG00000032467	RAB5C	100	99.074	Sus_scrofa
ENSTBEG00000007092	RAB5C	99	87.963	ENSTRUG00000015590	rab5c	98	90.278	Takifugu_rubripes
ENSTBEG00000007092	RAB5C	96	91.388	ENSTNIG00000011711	rab5c	95	91.388	Tetraodon_nigroviridis
ENSTBEG00000007092	RAB5C	100	98.148	ENSTTRG00000006673	RAB5C	100	98.148	Tursiops_truncatus
ENSTBEG00000007092	RAB5C	100	99.074	ENSUAMG00000024343	RAB5C	100	99.074	Ursus_americanus
ENSTBEG00000007092	RAB5C	100	99.074	ENSUMAG00000023270	RAB5C	100	99.074	Ursus_maritimus
ENSTBEG00000007092	RAB5C	96	91.429	ENSXCOG00000006300	-	99	88.636	Xiphophorus_couchianus
ENSTBEG00000007092	RAB5C	99	89.352	ENSXCOG00000016788	rab5c	98	91.204	Xiphophorus_couchianus
ENSTBEG00000007092	RAB5C	99	89.815	ENSXMAG00000003266	rab5c	98	91.204	Xiphophorus_maculatus
ENSTBEG00000007092	RAB5C	99	90.323	ENSXMAG00000022179	-	99	90.323	Xiphophorus_maculatus