EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTBEG00000007274 (Gene tree)
Gene ID: -
Gene Symbol: ARL5C
Alias: ARL12
Full Name: ADP ribosylation factor like GTPase 5C
Gene Type: protein_coding
Species: Tupaia_belangeri
Status: putative
Strand: Minus strand
Length: 8058 bases
Position: chrGeneScaffold_2939:24936-32993
Accession: 31111
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTBEP00000006274	MMR_HSR1	PF01926.23	1.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTBET00000007261	ARL5C-201	540	-	ENSTBEP00000006274	179 (aa)	-	UPI0000F5F40F

Gene Model

Click here to download ENSTBEG00000007274's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTBEG00000007274's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTBEG00000007274	ARL5C	93	39.759	ENSTBEG00000004286	ARL3	92	39.759
ENSTBEG00000007274	ARL5C	98	71.429	ENSTBEG00000011511	ARL5A	98	71.429
ENSTBEG00000007274	ARL5C	92	37.725	ENSTBEG00000005473	ARL14	87	37.725
ENSTBEG00000007274	ARL5C	88	48.408	ENSTBEG00000015546	ARL1	95	47.093
ENSTBEG00000007274	ARL5C	85	39.623	ENSTBEG00000004057	-	84	39.623
ENSTBEG00000007274	ARL5C	98	38.674	ENSTBEG00000002112	ARL6	97	38.674
ENSTBEG00000007274	ARL5C	89	77.987	ENSTBEG00000004162	ARL5B	98	77.987
ENSTBEG00000007274	ARL5C	98	47.727	ENSTBEG00000009218	ARF1	97	47.727
ENSTBEG00000007274	ARL5C	82	45.946	ENSTBEG00000007415	-	97	45.946

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTBEG00000007274	ARL5C	100	86.034	ENSAMEG00000004195	ARL5C	99	86.034	Ailuropoda_melanoleuca
ENSTBEG00000007274	ARL5C	99	79.213	ENSACAG00000003879	-	99	79.213	Anolis_carolinensis
ENSTBEG00000007274	ARL5C	100	89.385	ENSCAFG00000016525	ARL5C	100	89.385	Canis_familiaris
ENSTBEG00000007274	ARL5C	99	89.326	ENSCHIG00000008208	ARL5C	99	89.326	Capra_hircus
ENSTBEG00000007274	ARL5C	59	88.679	ENSCHOG00000013232	-	100	88.679	Choloepus_hoffmanni
ENSTBEG00000007274	ARL5C	99	78.531	ENSCGRG00001000695	Arl5c	99	78.531	Cricetulus_griseus_chok1gshd
ENSTBEG00000007274	ARL5C	99	79.096	ENSCGRG00000007376	Arl5c	99	79.096	Cricetulus_griseus_crigri
ENSTBEG00000007274	ARL5C	99	89.888	ENSDNOG00000019741	ARL5C	99	89.888	Dasypus_novemcinctus
ENSTBEG00000007274	ARL5C	99	87.640	ENSDORG00000016304	Arl5c	99	87.640	Dipodomys_ordii
ENSTBEG00000007274	ARL5C	92	87.805	ENSEASG00005001922	ARL5C	76	87.805	Equus_asinus_asinus
ENSTBEG00000007274	ARL5C	100	87.151	ENSECAG00000009024	ARL5C	100	87.151	Equus_caballus
ENSTBEG00000007274	ARL5C	100	88.268	ENSFCAG00000009962	ARL5C	100	88.268	Felis_catus
ENSTBEG00000007274	ARL5C	99	91.011	ENSSTOG00000011104	ARL5C	99	91.011	Ictidomys_tridecemlineatus
ENSTBEG00000007274	ARL5C	100	76.536	ENSLACG00000015332	ARL5C	100	76.536	Latimeria_chalumnae
ENSTBEG00000007274	ARL5C	100	89.944	ENSLAFG00000018248	ARL5C	99	89.944	Loxodonta_africana
ENSTBEG00000007274	ARL5C	99	76.271	ENSMAUG00000012845	Arl5c	87	76.271	Mesocricetus_auratus
ENSTBEG00000007274	ARL5C	100	88.827	ENSMICG00000002661	ARL5C	100	88.827	Microcebus_murinus
ENSTBEG00000007274	ARL5C	100	76.536	ENSMOCG00000000234	Arl5c	100	76.536	Microtus_ochrogaster
ENSTBEG00000007274	ARL5C	100	87.151	MGP_CAROLIEiJ_G0017071	Arl5c	100	87.151	Mus_caroli
ENSTBEG00000007274	ARL5C	100	87.709	ENSMUSG00000038352	Arl5c	100	87.709	Mus_musculus
ENSTBEG00000007274	ARL5C	100	86.034	MGP_PahariEiJ_G0018200	Arl5c	100	86.034	Mus_pahari
ENSTBEG00000007274	ARL5C	100	87.709	MGP_SPRETEiJ_G0017917	Arl5c	100	87.709	Mus_spretus
ENSTBEG00000007274	ARL5C	100	87.709	ENSMLUG00000030149	ARL5C	99	87.709	Myotis_lucifugus
ENSTBEG00000007274	ARL5C	100	86.034	ENSOGAG00000005894	ARL5C	100	86.034	Otolemur_garnettii
ENSTBEG00000007274	ARL5C	100	88.827	ENSOARG00000010377	ARL5C	99	88.827	Ovis_aries
ENSTBEG00000007274	ARL5C	100	88.827	ENSPPRG00000000975	ARL5C	100	88.827	Panthera_pardus
ENSTBEG00000007274	ARL5C	100	88.827	ENSPTIG00000017487	ARL5C	100	88.827	Panthera_tigris_altaica
ENSTBEG00000007274	ARL5C	99	85.876	ENSPEMG00000008932	Arl5c	99	85.876	Peromyscus_maniculatus_bairdii
ENSTBEG00000007274	ARL5C	100	88.827	ENSPCOG00000028489	ARL5C	100	88.827	Propithecus_coquereli
ENSTBEG00000007274	ARL5C	94	87.500	ENSPVAG00000008495	ARL5C	99	87.500	Pteropus_vampyrus
ENSTBEG00000007274	ARL5C	100	84.358	ENSRNOG00000036880	Arl5c	100	84.358	Rattus_norvegicus
ENSTBEG00000007274	ARL5C	96	75.000	ENSSBOG00000021022	ARL5C	98	75.000	Saimiri_boliviensis_boliviensis
ENSTBEG00000007274	ARL5C	96	78.947	ENSSPUG00000007555	ARL5C	100	80.368	Sphenodon_punctatus
ENSTBEG00000007274	ARL5C	100	88.827	ENSUAMG00000012299	ARL5C	100	88.827	Ursus_americanus
ENSTBEG00000007274	ARL5C	100	89.385	ENSUMAG00000017197	ARL5C	100	89.385	Ursus_maritimus
ENSTBEG00000007274	ARL5C	100	74.860	ENSXETG00000023713	arl5c	92	74.860	Xenopus_tropicalis