EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTBEG00000008646 (Gene tree)
Gene ID: -
Gene Symbol: POLR1A
Alias: DKFZP586M0122|FLJ21915|RPA1|RPO1-4
Full Name: RNA polymerase I subunit A
Gene Type: protein_coding
Species: Tupaia_belangeri
Status: putative
Strand: Minus strand
Length: 176400 bases
Position: chrGeneScaffold_388:98951-275350
Accession: 17264
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTBEP00000007537	RNA_pol_Rpb1_5	PF04998.17	1.6e-66	1	1
ENSTBEP00000007537	RNA_pol_Rpb1_4	PF05000.17	7.8e-22	1	1
ENSTBEP00000007537	RNA_pol_Rpb1_2	PF00623.20	3.3e-54	1	1
ENSTBEP00000007537	RNA_pol_Rpb1_3	PF04983.18	9.2e-15	1	1
ENSTBEP00000007537	RNA_pol_Rpb1_1	PF04997.12	2.1e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTBET00000008700	POLR1A-201	5109	-	ENSTBEP00000007537	1702 (aa)	-	UPI0000F5F883

Gene Model

Click here to download ENSTBEG00000008646's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTBEG00000008646's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTBEG00000008646	POLR1A	74	96.460	ENSG00000068654	POLR1A	74	96.460	Homo_sapiens
ENSTBEG00000008646	POLR1A	74	96.460	ENSAMEG00000005807	POLR1A	74	96.460	Ailuropoda_melanoleuca
ENSTBEG00000008646	POLR1A	69	82.301	ENSACIG00000022147	polr1a	71	82.301	Amphilophus_citrinellus
ENSTBEG00000008646	POLR1A	74	84.071	ENSAOCG00000017336	polr1a	73	84.071	Amphiprion_ocellaris
ENSTBEG00000008646	POLR1A	74	84.071	ENSAPEG00000016105	polr1a	73	84.071	Amphiprion_percula
ENSTBEG00000008646	POLR1A	74	83.628	ENSATEG00000016773	polr1a	73	83.628	Anabas_testudineus
ENSTBEG00000008646	POLR1A	55	86.283	ENSAPLG00000013871	POLR1A	64	86.283	Anas_platyrhynchos
ENSTBEG00000008646	POLR1A	70	86.726	ENSACAG00000012141	POLR1A	70	86.726	Anolis_carolinensis
ENSTBEG00000008646	POLR1A	74	96.460	ENSANAG00000033927	POLR1A	74	96.460	Aotus_nancymaae
ENSTBEG00000008646	POLR1A	70	82.743	ENSACLG00000020541	polr1a	70	82.743	Astatotilapia_calliptera
ENSTBEG00000008646	POLR1A	74	95.575	ENSBTAG00000006481	POLR1A	74	95.575	Bos_taurus
ENSTBEG00000008646	POLR1A	64	44.934	WBGene00012999	rpoa-1	61	44.934	Caenorhabditis_elegans
ENSTBEG00000008646	POLR1A	74	95.575	ENSCJAG00000019547	POLR1A	74	95.575	Callithrix_jacchus
ENSTBEG00000008646	POLR1A	74	96.460	ENSCAFG00000007613	POLR1A	74	96.460	Canis_familiaris
ENSTBEG00000008646	POLR1A	74	96.460	ENSCAFG00020014752	POLR1A	74	96.460	Canis_lupus_dingo
ENSTBEG00000008646	POLR1A	70	97.436	ENSCHIG00000018204	POLR1A	74	95.575	Capra_hircus
ENSTBEG00000008646	POLR1A	74	95.133	ENSTSYG00000002761	POLR1A	74	95.133	Carlito_syrichta
ENSTBEG00000008646	POLR1A	71	95.575	ENSCAPG00000010132	POLR1A	72	95.575	Cavia_aperea
ENSTBEG00000008646	POLR1A	74	95.133	ENSCPOG00000012350	POLR1A	74	95.133	Cavia_porcellus
ENSTBEG00000008646	POLR1A	74	95.575	ENSCCAG00000019839	POLR1A	74	95.575	Cebus_capucinus
ENSTBEG00000008646	POLR1A	70	100.000	ENSCATG00000029786	POLR1A	74	97.788	Cercocebus_atys
ENSTBEG00000008646	POLR1A	74	93.805	ENSCLAG00000005187	POLR1A	74	93.805	Chinchilla_lanigera
ENSTBEG00000008646	POLR1A	70	100.000	ENSCSAG00000016251	POLR1A	74	96.903	Chlorocebus_sabaeus
ENSTBEG00000008646	POLR1A	69	92.308	ENSCPBG00000001115	POLR1A	70	92.308	Chrysemys_picta_bellii
ENSTBEG00000008646	POLR1A	60	72.455	ENSCSAVG00000007184	-	69	72.455	Ciona_savignyi
ENSTBEG00000008646	POLR1A	70	100.000	ENSCANG00000031785	POLR1A	71	100.000	Colobus_angolensis_palliatus
ENSTBEG00000008646	POLR1A	70	98.148	ENSCGRG00001006651	Polr1a	73	98.148	Cricetulus_griseus_chok1gshd
ENSTBEG00000008646	POLR1A	73	72.566	ENSCSEG00000020190	polr1a	72	72.566	Cynoglossus_semilaevis
ENSTBEG00000008646	POLR1A	70	83.186	ENSCVAG00000020941	polr1a	69	83.186	Cyprinodon_variegatus
ENSTBEG00000008646	POLR1A	74	81.416	ENSDARG00000098375	polr1a	73	81.416	Danio_rerio
ENSTBEG00000008646	POLR1A	74	93.805	ENSDNOG00000010829	POLR1A	74	93.805	Dasypus_novemcinctus
ENSTBEG00000008646	POLR1A	74	95.575	ENSDORG00000008298	Polr1a	73	95.575	Dipodomys_ordii
ENSTBEG00000008646	POLR1A	58	71.795	FBgn0019938	RpI1	65	71.795	Drosophila_melanogaster
ENSTBEG00000008646	POLR1A	59	64.103	ENSEBUG00000005667	-	67	64.103	Eptatretus_burgeri
ENSTBEG00000008646	POLR1A	74	96.903	ENSEASG00005001625	POLR1A	74	96.903	Equus_asinus_asinus
ENSTBEG00000008646	POLR1A	74	96.903	ENSECAG00000030510	-	76	96.903	Equus_caballus
ENSTBEG00000008646	POLR1A	74	96.903	ENSECAG00000010092	POLR1A	76	96.903	Equus_caballus
ENSTBEG00000008646	POLR1A	74	96.903	ENSECAG00000036306	-	76	96.903	Equus_caballus
ENSTBEG00000008646	POLR1A	60	95.575	ENSEEUG00000000676	POLR1A	59	95.575	Erinaceus_europaeus
ENSTBEG00000008646	POLR1A	70	87.179	ENSELUG00000012769	polr1a	72	84.513	Esox_lucius
ENSTBEG00000008646	POLR1A	74	96.460	ENSFCAG00000008966	POLR1A	74	96.460	Felis_catus
ENSTBEG00000008646	POLR1A	72	85.841	ENSFALG00000010082	POLR1A	73	85.841	Ficedula_albicollis
ENSTBEG00000008646	POLR1A	74	95.133	ENSFDAG00000013726	POLR1A	74	95.133	Fukomys_damarensis
ENSTBEG00000008646	POLR1A	66	82.743	ENSFHEG00000005996	polr1a	68	82.743	Fundulus_heteroclitus
ENSTBEG00000008646	POLR1A	69	84.615	ENSGMOG00000002230	polr1a	69	84.615	Gadus_morhua
ENSTBEG00000008646	POLR1A	67	85.841	ENSGALG00000038160	-	74	85.841	Gallus_gallus
ENSTBEG00000008646	POLR1A	70	80.531	ENSGAFG00000015266	polr1a	69	80.531	Gambusia_affinis
ENSTBEG00000008646	POLR1A	70	83.628	ENSGACG00000018791	polr1a	70	83.628	Gasterosteus_aculeatus
ENSTBEG00000008646	POLR1A	59	92.308	ENSGAGG00000004984	-	65	92.308	Gopherus_agassizii
ENSTBEG00000008646	POLR1A	74	96.460	ENSGGOG00000001788	POLR1A	74	96.460	Gorilla_gorilla
ENSTBEG00000008646	POLR1A	59	82.743	ENSHBUG00000020021	polr1a	66	82.743	Haplochromis_burtoni
ENSTBEG00000008646	POLR1A	74	96.460	ENSHGLG00000006334	POLR1A	74	96.460	Heterocephalus_glaber_female
ENSTBEG00000008646	POLR1A	74	94.372	ENSHGLG00100006614	POLR1A	74	94.372	Heterocephalus_glaber_male
ENSTBEG00000008646	POLR1A	69	81.416	ENSHCOG00000003345	polr1a	99	55.678	Hippocampus_comes
ENSTBEG00000008646	POLR1A	74	82.301	ENSIPUG00000013174	polr1a	73	82.301	Ictalurus_punctatus
ENSTBEG00000008646	POLR1A	74	93.805	ENSSTOG00000012580	POLR1A	74	93.805	Ictidomys_tridecemlineatus
ENSTBEG00000008646	POLR1A	74	96.460	ENSJJAG00000013113	Polr1a	74	96.460	Jaculus_jaculus
ENSTBEG00000008646	POLR1A	74	81.858	ENSKMAG00000007399	polr1a	74	81.858	Kryptolebias_marmoratus
ENSTBEG00000008646	POLR1A	69	84.071	ENSLBEG00000015401	polr1a	72	84.071	Labrus_bergylta
ENSTBEG00000008646	POLR1A	74	84.956	ENSLOCG00000010881	polr1a	73	84.956	Lepisosteus_oculatus
ENSTBEG00000008646	POLR1A	74	94.248	ENSLAFG00000014948	POLR1A	74	94.248	Loxodonta_africana
ENSTBEG00000008646	POLR1A	70	100.000	ENSMFAG00000046097	POLR1A	74	97.345	Macaca_fascicularis
ENSTBEG00000008646	POLR1A	70	100.000	ENSMMUG00000015815	POLR1A	74	97.345	Macaca_mulatta
ENSTBEG00000008646	POLR1A	70	100.000	ENSMNEG00000043313	POLR1A	74	97.345	Macaca_nemestrina
ENSTBEG00000008646	POLR1A	70	100.000	ENSMLEG00000042428	POLR1A	74	97.345	Mandrillus_leucophaeus
ENSTBEG00000008646	POLR1A	74	84.513	ENSMAMG00000016565	polr1a	73	84.513	Mastacembelus_armatus
ENSTBEG00000008646	POLR1A	74	82.743	ENSMZEG00005004915	polr1a	73	82.743	Maylandia_zebra
ENSTBEG00000008646	POLR1A	69	85.398	ENSMGAG00000013111	POLR1A	70	85.398	Meleagris_gallopavo
ENSTBEG00000008646	POLR1A	65	96.903	ENSMAUG00000008497	Polr1a	71	96.903	Mesocricetus_auratus
ENSTBEG00000008646	POLR1A	74	96.903	ENSMICG00000000757	POLR1A	74	96.903	Microcebus_murinus
ENSTBEG00000008646	POLR1A	70	100.000	ENSMOCG00000000122	Polr1a	71	100.000	Microtus_ochrogaster
ENSTBEG00000008646	POLR1A	74	83.186	ENSMMOG00000010216	polr1a	73	83.186	Mola_mola
ENSTBEG00000008646	POLR1A	70	94.872	ENSMODG00000009335	POLR1A	70	94.872	Monodelphis_domestica
ENSTBEG00000008646	POLR1A	74	84.071	ENSMALG00000013363	polr1a	74	84.071	Monopterus_albus
ENSTBEG00000008646	POLR1A	74	96.460	MGP_CAROLIEiJ_G0028494	Polr1a	99	82.796	Mus_caroli
ENSTBEG00000008646	POLR1A	74	96.460	ENSMUSG00000049553	Polr1a	99	82.796	Mus_musculus
ENSTBEG00000008646	POLR1A	74	96.460	MGP_PahariEiJ_G0022230	Polr1a	99	85.305	Mus_pahari
ENSTBEG00000008646	POLR1A	74	96.460	MGP_SPRETEiJ_G0029499	Polr1a	99	82.796	Mus_spretus
ENSTBEG00000008646	POLR1A	74	96.903	ENSMPUG00000009135	POLR1A	74	96.903	Mustela_putorius_furo
ENSTBEG00000008646	POLR1A	74	95.133	ENSMLUG00000015723	POLR1A	74	95.133	Myotis_lucifugus
ENSTBEG00000008646	POLR1A	74	96.018	ENSNGAG00000017907	Polr1a	74	96.018	Nannospalax_galili
ENSTBEG00000008646	POLR1A	74	82.743	ENSNBRG00000000519	polr1a	73	82.743	Neolamprologus_brichardi
ENSTBEG00000008646	POLR1A	70	100.000	ENSNLEG00000002264	POLR1A	69	100.000	Nomascus_leucogenys
ENSTBEG00000008646	POLR1A	59	94.872	ENSMEUG00000011665	-	59	94.872	Notamacropus_eugenii
ENSTBEG00000008646	POLR1A	74	95.133	ENSOPRG00000008269	POLR1A	75	95.133	Ochotona_princeps
ENSTBEG00000008646	POLR1A	74	95.575	ENSODEG00000003542	POLR1A	74	95.575	Octodon_degus
ENSTBEG00000008646	POLR1A	74	82.301	ENSONIG00000015895	polr1a	73	82.301	Oreochromis_niloticus
ENSTBEG00000008646	POLR1A	74	96.460	ENSOCUG00000010138	POLR1A	74	96.460	Oryctolagus_cuniculus
ENSTBEG00000008646	POLR1A	74	82.743	ENSORLG00000008753	polr1a	73	82.743	Oryzias_latipes
ENSTBEG00000008646	POLR1A	73	83.186	ENSORLG00020020726	polr1a	72	83.186	Oryzias_latipes_hni
ENSTBEG00000008646	POLR1A	66	82.743	ENSORLG00015016071	polr1a	69	82.743	Oryzias_latipes_hsok
ENSTBEG00000008646	POLR1A	74	96.018	ENSOGAG00000004031	POLR1A	70	100.000	Otolemur_garnettii
ENSTBEG00000008646	POLR1A	74	96.018	ENSOARG00000020601	POLR1A	74	96.018	Ovis_aries
ENSTBEG00000008646	POLR1A	74	97.345	ENSPPAG00000042450	POLR1A	74	97.345	Pan_paniscus
ENSTBEG00000008646	POLR1A	74	96.460	ENSPPRG00000006702	POLR1A	74	96.460	Panthera_pardus
ENSTBEG00000008646	POLR1A	74	92.241	ENSPTIG00000018783	POLR1A	74	92.241	Panthera_tigris_altaica
ENSTBEG00000008646	POLR1A	74	96.903	ENSPTRG00000012147	POLR1A	74	96.903	Pan_troglodytes
ENSTBEG00000008646	POLR1A	70	100.000	ENSPANG00000025908	POLR1A	74	97.345	Papio_anubis
ENSTBEG00000008646	POLR1A	74	84.513	ENSPKIG00000005468	polr1a	74	84.513	Paramormyrops_kingsleyae
ENSTBEG00000008646	POLR1A	74	96.460	ENSPEMG00000022224	Polr1a	74	96.460	Peromyscus_maniculatus_bairdii
ENSTBEG00000008646	POLR1A	70	97.436	ENSPCIG00000004222	POLR1A	72	97.436	Phascolarctos_cinereus
ENSTBEG00000008646	POLR1A	74	80.531	ENSPFOG00000005025	polr1a	73	80.531	Poecilia_formosa
ENSTBEG00000008646	POLR1A	74	80.531	ENSPLAG00000021389	polr1a	73	80.531	Poecilia_latipinna
ENSTBEG00000008646	POLR1A	70	80.531	ENSPMEG00000006463	polr1a	72	80.531	Poecilia_mexicana
ENSTBEG00000008646	POLR1A	74	80.531	ENSPREG00000002389	polr1a	73	80.531	Poecilia_reticulata
ENSTBEG00000008646	POLR1A	74	96.460	ENSPPYG00000012217	POLR1A	74	96.460	Pongo_abelii
ENSTBEG00000008646	POLR1A	66	100.000	ENSPCAG00000011582	POLR1A	65	100.000	Procavia_capensis
ENSTBEG00000008646	POLR1A	74	96.903	ENSPCOG00000026987	POLR1A	74	96.903	Propithecus_coquereli
ENSTBEG00000008646	POLR1A	71	93.805	ENSPVAG00000012674	POLR1A	71	93.805	Pteropus_vampyrus
ENSTBEG00000008646	POLR1A	74	82.743	ENSPNYG00000000026	polr1a	73	82.743	Pundamilia_nyererei
ENSTBEG00000008646	POLR1A	74	82.301	ENSPNAG00000019223	polr1a	73	82.301	Pygocentrus_nattereri
ENSTBEG00000008646	POLR1A	74	95.575	ENSRNOG00000009545	Polr1a	74	95.575	Rattus_norvegicus
ENSTBEG00000008646	POLR1A	70	100.000	ENSRBIG00000028335	POLR1A	74	97.345	Rhinopithecus_bieti
ENSTBEG00000008646	POLR1A	70	100.000	ENSRROG00000031473	POLR1A	74	97.345	Rhinopithecus_roxellana
ENSTBEG00000008646	POLR1A	63	55.411	YOR341W	RPA190	62	55.411	Saccharomyces_cerevisiae
ENSTBEG00000008646	POLR1A	74	95.575	ENSSBOG00000030262	POLR1A	74	95.575	Saimiri_boliviensis_boliviensis
ENSTBEG00000008646	POLR1A	70	100.000	ENSSHAG00000014739	POLR1A	70	100.000	Sarcophilus_harrisii
ENSTBEG00000008646	POLR1A	74	86.283	ENSSFOG00015019716	polr1a	74	86.283	Scleropages_formosus
ENSTBEG00000008646	POLR1A	74	82.743	ENSSMAG00000014342	polr1a	73	82.743	Scophthalmus_maximus
ENSTBEG00000008646	POLR1A	74	84.071	ENSSDUG00000014631	polr1a	73	84.071	Seriola_dumerili
ENSTBEG00000008646	POLR1A	73	84.071	ENSSLDG00000024095	polr1a	73	84.071	Seriola_lalandi_dorsalis
ENSTBEG00000008646	POLR1A	51	97.436	ENSSARG00000003136	-	51	97.436	Sorex_araneus
ENSTBEG00000008646	POLR1A	70	85.841	ENSSPUG00000004215	POLR1A	69	85.841	Sphenodon_punctatus
ENSTBEG00000008646	POLR1A	62	97.345	ENSSSCG00000008226	POLR1A	74	97.345	Sus_scrofa
ENSTBEG00000008646	POLR1A	72	85.088	ENSTGUG00000010704	POLR1A	73	85.088	Taeniopygia_guttata
ENSTBEG00000008646	POLR1A	74	79.204	ENSTRUG00000002210	polr1a	74	79.204	Takifugu_rubripes
ENSTBEG00000008646	POLR1A	70	82.051	ENSTNIG00000010116	polr1a	70	82.051	Tetraodon_nigroviridis
ENSTBEG00000008646	POLR1A	72	95.133	ENSTTRG00000008597	POLR1A	72	95.133	Tursiops_truncatus
ENSTBEG00000008646	POLR1A	52	96.644	ENSUAMG00000012158	-	72	96.644	Ursus_americanus
ENSTBEG00000008646	POLR1A	74	95.575	ENSUMAG00000006700	POLR1A	74	95.575	Ursus_maritimus
ENSTBEG00000008646	POLR1A	74	96.460	ENSVVUG00000001245	POLR1A	76	96.460	Vulpes_vulpes
ENSTBEG00000008646	POLR1A	74	86.283	ENSXETG00000001952	polr1a	74	86.283	Xenopus_tropicalis
ENSTBEG00000008646	POLR1A	74	80.531	ENSXMAG00000004032	polr1a	73	80.531	Xiphophorus_maculatus