EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTBEG00000008714 (Gene tree)
Gene ID: -
Gene Symbol: SF3B1
Alias: Hsh155|PRPF10|Prp10|SAP155|SF3b155
Full Name: splicing factor 3b subunit 1
Gene Type: protein_coding
Species: Tupaia_belangeri
Status: putative
Strand: Minus strand
Length: 44028 bases
Position: chrGeneScaffold_1557:10702-54729
Accession: 10768
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTBEP00000007559	SF3b1	PF08920.10	6.3e-48	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTBET00000008725	SF3B1-201	3561	-	ENSTBEP00000007559	1187 (aa)	-	UPI0000F5E8D7

Gene Model

Click here to download ENSTBEG00000008714's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTBEG00000008714's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTBEG00000008714	SF3B1	93	100.000	ENSG00000115524	SF3B1	100	100.000	Homo_sapiens
ENSTBEG00000008714	SF3B1	93	97.211	ENSAPOG00000011894	sf3b1	91	97.185	Acanthochromis_polyacanthus
ENSTBEG00000008714	SF3B1	92	100.000	ENSAMEG00000013809	SF3B1	87	100.000	Ailuropoda_melanoleuca
ENSTBEG00000008714	SF3B1	93	96.281	ENSACIG00000020910	sf3b1	82	96.281	Amphilophus_citrinellus
ENSTBEG00000008714	SF3B1	93	97.211	ENSAOCG00000004478	sf3b1	88	97.211	Amphiprion_ocellaris
ENSTBEG00000008714	SF3B1	93	97.211	ENSAPEG00000012937	sf3b1	88	97.211	Amphiprion_percula
ENSTBEG00000008714	SF3B1	93	97.107	ENSATEG00000020435	sf3b1	84	97.107	Anabas_testudineus
ENSTBEG00000008714	SF3B1	92	99.690	ENSAPLG00000003993	SF3B1	87	99.690	Anas_platyrhynchos
ENSTBEG00000008714	SF3B1	93	99.380	ENSACAG00000009612	SF3B1	85	99.380	Anolis_carolinensis
ENSTBEG00000008714	SF3B1	93	100.000	ENSANAG00000021577	SF3B1	88	100.000	Aotus_nancymaae
ENSTBEG00000008714	SF3B1	93	96.384	ENSACLG00000023470	sf3b1	84	96.384	Astatotilapia_calliptera
ENSTBEG00000008714	SF3B1	93	97.727	ENSAMXG00000002219	sf3b1	84	97.727	Astyanax_mexicanus
ENSTBEG00000008714	SF3B1	93	100.000	ENSBTAG00000008915	SF3B1	88	100.000	Bos_taurus
ENSTBEG00000008714	SF3B1	89	74.797	WBGene00011605	sftb-1	74	74.898	Caenorhabditis_elegans
ENSTBEG00000008714	SF3B1	93	100.000	ENSCJAG00000003902	SF3B1	88	100.000	Callithrix_jacchus
ENSTBEG00000008714	SF3B1	93	100.000	ENSCAFG00000010826	SF3B1	88	100.000	Canis_familiaris
ENSTBEG00000008714	SF3B1	93	100.000	ENSCAFG00020004750	SF3B1	88	100.000	Canis_lupus_dingo
ENSTBEG00000008714	SF3B1	93	100.000	ENSCHIG00000015226	SF3B1	88	100.000	Capra_hircus
ENSTBEG00000008714	SF3B1	93	100.000	ENSTSYG00000009214	SF3B1	88	100.000	Carlito_syrichta
ENSTBEG00000008714	SF3B1	92	99.793	ENSCAPG00000006547	SF3B1	87	99.793	Cavia_aperea
ENSTBEG00000008714	SF3B1	92	100.000	ENSCPOG00000009353	SF3B1	88	100.000	Cavia_porcellus
ENSTBEG00000008714	SF3B1	93	100.000	ENSCCAG00000020506	SF3B1	88	100.000	Cebus_capucinus
ENSTBEG00000008714	SF3B1	93	100.000	ENSCATG00000035735	SF3B1	88	100.000	Cercocebus_atys
ENSTBEG00000008714	SF3B1	92	100.000	ENSCLAG00000014767	SF3B1	87	100.000	Chinchilla_lanigera
ENSTBEG00000008714	SF3B1	93	100.000	ENSCSAG00000011505	SF3B1	88	100.000	Chlorocebus_sabaeus
ENSTBEG00000008714	SF3B1	79	98.462	ENSCHOG00000009860	SF3B1	72	98.438	Choloepus_hoffmanni
ENSTBEG00000008714	SF3B1	93	99.586	ENSCPBG00000021902	SF3B1	94	99.549	Chrysemys_picta_bellii
ENSTBEG00000008714	SF3B1	68	83.422	ENSCING00000002558	-	90	83.422	Ciona_intestinalis
ENSTBEG00000008714	SF3B1	93	86.210	ENSCSAVG00000002559	-	85	86.006	Ciona_savignyi
ENSTBEG00000008714	SF3B1	93	100.000	ENSCANG00000029415	SF3B1	88	100.000	Colobus_angolensis_palliatus
ENSTBEG00000008714	SF3B1	93	100.000	ENSCGRG00001016990	Sf3b1	88	100.000	Cricetulus_griseus_chok1gshd
ENSTBEG00000008714	SF3B1	93	100.000	ENSCGRG00000005301	Sf3b1	88	100.000	Cricetulus_griseus_crigri
ENSTBEG00000008714	SF3B1	93	92.355	ENSCSEG00000003860	sf3b1	84	92.355	Cynoglossus_semilaevis
ENSTBEG00000008714	SF3B1	93	97.004	ENSCVAG00000003680	sf3b1	87	97.004	Cyprinodon_variegatus
ENSTBEG00000008714	SF3B1	93	97.211	ENSDARG00000056138	sf3b1	88	97.211	Danio_rerio
ENSTBEG00000008714	SF3B1	93	100.000	ENSDNOG00000011754	SF3B1	88	100.000	Dasypus_novemcinctus
ENSTBEG00000008714	SF3B1	92	99.793	ENSDORG00000002399	Sf3b1	87	99.793	Dipodomys_ordii
ENSTBEG00000008714	SF3B1	93	83.832	FBgn0031266	Sf3b1	84	83.832	Drosophila_melanogaster
ENSTBEG00000008714	SF3B1	84	99.219	ENSETEG00000009188	SF3B1	96	99.219	Echinops_telfairi
ENSTBEG00000008714	SF3B1	91	92.946	ENSEBUG00000004325	sf3b1	86	92.946	Eptatretus_burgeri
ENSTBEG00000008714	SF3B1	93	100.000	ENSEASG00005020159	SF3B1	85	100.000	Equus_asinus_asinus
ENSTBEG00000008714	SF3B1	93	100.000	ENSECAG00000021657	SF3B1	85	100.000	Equus_caballus
ENSTBEG00000008714	SF3B1	84	100.000	ENSEEUG00000000836	SF3B1	74	100.000	Erinaceus_europaeus
ENSTBEG00000008714	SF3B1	93	97.107	ENSELUG00000005977	sf3b1	82	97.107	Esox_lucius
ENSTBEG00000008714	SF3B1	93	100.000	ENSFCAG00000005038	SF3B1	88	100.000	Felis_catus
ENSTBEG00000008714	SF3B1	92	99.690	ENSFALG00000004281	SF3B1	87	99.690	Ficedula_albicollis
ENSTBEG00000008714	SF3B1	93	100.000	ENSFDAG00000017510	SF3B1	88	100.000	Fukomys_damarensis
ENSTBEG00000008714	SF3B1	93	97.211	ENSFHEG00000014333	sf3b1	84	97.211	Fundulus_heteroclitus
ENSTBEG00000008714	SF3B1	93	97.211	ENSGMOG00000006773	sf3b1	84	97.211	Gadus_morhua
ENSTBEG00000008714	SF3B1	93	99.690	ENSGALG00000008038	SF3B1	88	99.690	Gallus_gallus
ENSTBEG00000008714	SF3B1	91	96.901	ENSGAFG00000000704	sf3b1	84	96.901	Gambusia_affinis
ENSTBEG00000008714	SF3B1	93	97.211	ENSGACG00000008839	sf3b1	84	97.211	Gasterosteus_aculeatus
ENSTBEG00000008714	SF3B1	93	99.586	ENSGAGG00000017478	SF3B1	87	99.586	Gopherus_agassizii
ENSTBEG00000008714	SF3B1	91	100.000	ENSGGOG00000009264	SF3B1	86	100.000	Gorilla_gorilla
ENSTBEG00000008714	SF3B1	93	96.384	ENSHBUG00000007705	sf3b1	84	96.384	Haplochromis_burtoni
ENSTBEG00000008714	SF3B1	92	100.000	ENSHGLG00000008285	-	87	100.000	Heterocephalus_glaber_female
ENSTBEG00000008714	SF3B1	92	100.000	ENSHGLG00100005535	-	88	100.000	Heterocephalus_glaber_male
ENSTBEG00000008714	SF3B1	93	97.107	ENSHCOG00000016775	sf3b1	84	97.107	Hippocampus_comes
ENSTBEG00000008714	SF3B1	93	97.521	ENSIPUG00000013171	sf3b1	85	97.521	Ictalurus_punctatus
ENSTBEG00000008714	SF3B1	93	100.000	ENSSTOG00000011034	SF3B1	88	100.000	Ictidomys_tridecemlineatus
ENSTBEG00000008714	SF3B1	92	100.000	ENSJJAG00000010903	Sf3b1	87	100.000	Jaculus_jaculus
ENSTBEG00000008714	SF3B1	93	96.901	ENSKMAG00000004009	sf3b1	84	96.901	Kryptolebias_marmoratus
ENSTBEG00000008714	SF3B1	93	97.004	ENSLBEG00000022208	sf3b1	85	97.004	Labrus_bergylta
ENSTBEG00000008714	SF3B1	92	94.829	ENSLACG00000014832	SF3B1	83	94.938	Latimeria_chalumnae
ENSTBEG00000008714	SF3B1	93	97.526	ENSLOCG00000003899	sf3b1	84	97.526	Lepisosteus_oculatus
ENSTBEG00000008714	SF3B1	93	100.000	ENSLAFG00000001956	SF3B1	88	100.000	Loxodonta_africana
ENSTBEG00000008714	SF3B1	92	100.000	ENSMMUG00000022430	SF3B1	87	100.000	Macaca_mulatta
ENSTBEG00000008714	SF3B1	93	100.000	ENSMNEG00000042333	SF3B1	88	100.000	Macaca_nemestrina
ENSTBEG00000008714	SF3B1	86	100.000	ENSMLEG00000026141	SF3B1	83	100.000	Mandrillus_leucophaeus
ENSTBEG00000008714	SF3B1	93	97.004	ENSMAMG00000010241	sf3b1	84	97.004	Mastacembelus_armatus
ENSTBEG00000008714	SF3B1	93	96.384	ENSMZEG00005021254	sf3b1	84	96.384	Maylandia_zebra
ENSTBEG00000008714	SF3B1	92	99.690	ENSMGAG00000007017	SF3B1	87	99.690	Meleagris_gallopavo
ENSTBEG00000008714	SF3B1	93	100.000	ENSMAUG00000009071	Sf3b1	87	100.000	Mesocricetus_auratus
ENSTBEG00000008714	SF3B1	93	100.000	ENSMICG00000013879	SF3B1	88	100.000	Microcebus_murinus
ENSTBEG00000008714	SF3B1	92	99.231	ENSMOCG00000000455	Sf3b1	87	99.231	Microtus_ochrogaster
ENSTBEG00000008714	SF3B1	84	96.544	ENSMMOG00000000475	sf3b1	92	96.544	Mola_mola
ENSTBEG00000008714	SF3B1	93	99.793	ENSMODG00000012275	SF3B1	88	99.793	Monodelphis_domestica
ENSTBEG00000008714	SF3B1	93	96.901	ENSMALG00000017211	sf3b1	84	96.901	Monopterus_albus
ENSTBEG00000008714	SF3B1	93	100.000	MGP_CAROLIEiJ_G0014141	Sf3b1	88	100.000	Mus_caroli
ENSTBEG00000008714	SF3B1	93	100.000	ENSMUSG00000025982	Sf3b1	88	100.000	Mus_musculus
ENSTBEG00000008714	SF3B1	93	100.000	MGP_SPRETEiJ_G0014947	Sf3b1	88	100.000	Mus_spretus
ENSTBEG00000008714	SF3B1	93	100.000	ENSMPUG00000007799	SF3B1	88	100.000	Mustela_putorius_furo
ENSTBEG00000008714	SF3B1	93	100.000	ENSMLUG00000000840	SF3B1	88	100.000	Myotis_lucifugus
ENSTBEG00000008714	SF3B1	93	99.793	ENSNGAG00000021884	-	88	99.793	Nannospalax_galili
ENSTBEG00000008714	SF3B1	90	96.384	ENSNBRG00000015816	sf3b1	83	96.384	Neolamprologus_brichardi
ENSTBEG00000008714	SF3B1	93	100.000	ENSNLEG00000006861	SF3B1	88	100.000	Nomascus_leucogenys
ENSTBEG00000008714	SF3B1	64	100.000	ENSMEUG00000015848	-	58	100.000	Notamacropus_eugenii
ENSTBEG00000008714	SF3B1	93	87.590	ENSOPRG00000008596	SF3B1	85	87.590	Ochotona_princeps
ENSTBEG00000008714	SF3B1	93	100.000	ENSODEG00000011153	-	88	100.000	Octodon_degus
ENSTBEG00000008714	SF3B1	93	96.384	ENSONIG00000013758	sf3b1	84	96.384	Oreochromis_niloticus
ENSTBEG00000008714	SF3B1	81	98.862	ENSOCUG00000012722	-	85	98.862	Oryctolagus_cuniculus
ENSTBEG00000008714	SF3B1	93	97.004	ENSORLG00000020219	sf3b1	88	97.004	Oryzias_latipes
ENSTBEG00000008714	SF3B1	93	97.004	ENSORLG00020001746	sf3b1	88	97.004	Oryzias_latipes_hni
ENSTBEG00000008714	SF3B1	63	94.935	ENSORLG00015001759	sf3b1	88	94.935	Oryzias_latipes_hsok
ENSTBEG00000008714	SF3B1	93	97.004	ENSOMEG00000019231	sf3b1	84	97.004	Oryzias_melastigma
ENSTBEG00000008714	SF3B1	93	100.000	ENSOARG00000015374	SF3B1	88	100.000	Ovis_aries
ENSTBEG00000008714	SF3B1	93	100.000	ENSPPAG00000035007	SF3B1	88	100.000	Pan_paniscus
ENSTBEG00000008714	SF3B1	93	100.000	ENSPPRG00000009090	SF3B1	88	100.000	Panthera_pardus
ENSTBEG00000008714	SF3B1	93	100.000	ENSPTIG00000021557	SF3B1	88	100.000	Panthera_tigris_altaica
ENSTBEG00000008714	SF3B1	92	100.000	ENSPTRG00000012771	SF3B1	85	100.000	Pan_troglodytes
ENSTBEG00000008714	SF3B1	93	100.000	ENSPANG00000013417	SF3B1	88	100.000	Papio_anubis
ENSTBEG00000008714	SF3B1	93	97.521	ENSPKIG00000000784	sf3b1	87	97.010	Paramormyrops_kingsleyae
ENSTBEG00000008714	SF3B1	92	99.586	ENSPSIG00000017222	SF3B1	85	99.586	Pelodiscus_sinensis
ENSTBEG00000008714	SF3B1	92	97.080	ENSPMGG00000004330	sf3b1	92	97.080	Periophthalmus_magnuspinnatus
ENSTBEG00000008714	SF3B1	92	100.000	ENSPEMG00000010699	Sf3b1	88	100.000	Peromyscus_maniculatus_bairdii
ENSTBEG00000008714	SF3B1	93	94.845	ENSPMAG00000001311	sf3b1	85	94.845	Petromyzon_marinus
ENSTBEG00000008714	SF3B1	93	99.793	ENSPCIG00000010642	SF3B1	88	99.793	Phascolarctos_cinereus
ENSTBEG00000008714	SF3B1	93	97.004	ENSPFOG00000000073	sf3b1	84	97.004	Poecilia_formosa
ENSTBEG00000008714	SF3B1	93	97.004	ENSPLAG00000002293	sf3b1	84	97.004	Poecilia_latipinna
ENSTBEG00000008714	SF3B1	93	97.004	ENSPMEG00000000446	sf3b1	82	97.004	Poecilia_mexicana
ENSTBEG00000008714	SF3B1	93	97.004	ENSPREG00000019652	sf3b1	84	97.004	Poecilia_reticulata
ENSTBEG00000008714	SF3B1	86	100.000	ENSPPYG00000013044	SF3B1	90	100.000	Pongo_abelii
ENSTBEG00000008714	SF3B1	93	100.000	ENSPCAG00000009292	SF3B1	88	100.000	Procavia_capensis
ENSTBEG00000008714	SF3B1	93	100.000	ENSPCOG00000024074	SF3B1	88	100.000	Propithecus_coquereli
ENSTBEG00000008714	SF3B1	93	100.000	ENSPVAG00000008302	SF3B1	88	100.000	Pteropus_vampyrus
ENSTBEG00000008714	SF3B1	93	96.384	ENSPNYG00000014939	sf3b1	84	96.384	Pundamilia_nyererei
ENSTBEG00000008714	SF3B1	93	97.624	ENSPNAG00000008288	sf3b1	84	97.624	Pygocentrus_nattereri
ENSTBEG00000008714	SF3B1	93	100.000	ENSRNOG00000013516	Sf3b1	88	100.000	Rattus_norvegicus
ENSTBEG00000008714	SF3B1	93	97.794	ENSRBIG00000026096	SF3B1	87	97.794	Rhinopithecus_bieti
ENSTBEG00000008714	SF3B1	93	100.000	ENSRROG00000031308	SF3B1	88	100.000	Rhinopithecus_roxellana
ENSTBEG00000008714	SF3B1	93	100.000	ENSSBOG00000020080	SF3B1	88	100.000	Saimiri_boliviensis_boliviensis
ENSTBEG00000008714	SF3B1	93	99.793	ENSSHAG00000017564	SF3B1	88	99.793	Sarcophilus_harrisii
ENSTBEG00000008714	SF3B1	93	97.624	ENSSFOG00015021535	sf3b1	84	97.624	Scleropages_formosus
ENSTBEG00000008714	SF3B1	93	97.211	ENSSMAG00000013977	sf3b1	83	97.211	Scophthalmus_maximus
ENSTBEG00000008714	SF3B1	93	97.107	ENSSDUG00000017422	sf3b1	84	97.107	Seriola_dumerili
ENSTBEG00000008714	SF3B1	93	97.107	ENSSLDG00000019495	sf3b1	84	97.107	Seriola_lalandi_dorsalis
ENSTBEG00000008714	SF3B1	67	100.000	ENSSARG00000007016	SF3B1	61	100.000	Sorex_araneus
ENSTBEG00000008714	SF3B1	93	99.380	ENSSPUG00000000410	SF3B1	88	99.380	Sphenodon_punctatus
ENSTBEG00000008714	SF3B1	93	97.211	ENSSPAG00000010451	sf3b1	83	97.211	Stegastes_partitus
ENSTBEG00000008714	SF3B1	93	100.000	ENSSSCG00000016075	SF3B1	93	100.000	Sus_scrofa
ENSTBEG00000008714	SF3B1	93	99.690	ENSTGUG00000010553	SF3B1	88	99.690	Taeniopygia_guttata
ENSTBEG00000008714	SF3B1	93	96.502	ENSTRUG00000015534	sf3b1	84	96.502	Takifugu_rubripes
ENSTBEG00000008714	SF3B1	84	100.000	ENSTTRG00000003414	SF3B1	80	100.000	Tursiops_truncatus
ENSTBEG00000008714	SF3B1	86	100.000	ENSUAMG00000018506	SF3B1	88	100.000	Ursus_americanus
ENSTBEG00000008714	SF3B1	93	100.000	ENSUMAG00000020945	SF3B1	88	100.000	Ursus_maritimus
ENSTBEG00000008714	SF3B1	88	100.000	ENSVPAG00000005798	SF3B1	80	100.000	Vicugna_pacos
ENSTBEG00000008714	SF3B1	93	100.000	ENSVVUG00000025948	SF3B1	83	100.000	Vulpes_vulpes
ENSTBEG00000008714	SF3B1	93	98.345	ENSXETG00000013339	sf3b1	87	98.345	Xenopus_tropicalis
ENSTBEG00000008714	SF3B1	92	92.141	ENSXCOG00000018086	sf3b1	86	92.141	Xiphophorus_couchianus
ENSTBEG00000008714	SF3B1	93	97.004	ENSXMAG00000007369	sf3b1	85	97.004	Xiphophorus_maculatus