EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTBEG00000008911 (Gene tree)
Gene ID: -
Gene Symbol: TRMT13
Alias: CCDC76|FLJ10287|FLJ11219
Full Name: tRNA methyltransferase 13 homolog
Gene Type: protein_coding
Species: Tupaia_belangeri
Status: putative
Strand: Plus strand
Length: 8814 bases
Position: chrGeneScaffold_1867:3001-11814
Accession: 25502
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTBEP00000007720	TRM13	PF05206.14	1e-62	1	2
ENSTBEP00000007720	TRM13	PF05206.14	1e-62	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTBET00000008907	TRMT13-201	1224	-	ENSTBEP00000007720	407 (aa)	-	UPI0000F602FD

Gene Model

Click here to download ENSTBEG00000008911's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTBEG00000008911's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTBEG00000008911	TRMT13	100	75.721	ENSG00000122435	TRMT13	86	75.721	Homo_sapiens
ENSTBEG00000008911	TRMT13	75	47.297	ENSAPOG00000015131	trmt13	67	47.297	Acanthochromis_polyacanthus
ENSTBEG00000008911	TRMT13	100	74.519	ENSAMEG00000008917	TRMT13	86	74.519	Ailuropoda_melanoleuca
ENSTBEG00000008911	TRMT13	84	53.659	ENSACIG00000005804	trmt13	70	50.610	Amphilophus_citrinellus
ENSTBEG00000008911	TRMT13	70	57.143	ENSAOCG00000023585	trmt13	57	57.143	Amphiprion_ocellaris
ENSTBEG00000008911	TRMT13	70	57.143	ENSAPEG00000004025	trmt13	57	57.143	Amphiprion_percula
ENSTBEG00000008911	TRMT13	99	39.294	ENSATEG00000006597	trmt13	87	39.294	Anabas_testudineus
ENSTBEG00000008911	TRMT13	98	54.015	ENSAPLG00000014924	TRMT13	95	54.015	Anas_platyrhynchos
ENSTBEG00000008911	TRMT13	86	66.038	ENSACAG00000003498	TRMT13	75	66.038	Anolis_carolinensis
ENSTBEG00000008911	TRMT13	100	75.721	ENSANAG00000019525	TRMT13	86	75.721	Aotus_nancymaae
ENSTBEG00000008911	TRMT13	99	42.206	ENSACLG00000020018	trmt13	88	42.206	Astatotilapia_calliptera
ENSTBEG00000008911	TRMT13	98	43.373	ENSAMXG00000017963	trmt13	86	44.203	Astyanax_mexicanus
ENSTBEG00000008911	TRMT13	100	74.279	ENSBTAG00000015781	TRMT13	86	74.279	Bos_taurus
ENSTBEG00000008911	TRMT13	100	74.760	ENSCJAG00000000200	TRMT13	86	74.760	Callithrix_jacchus
ENSTBEG00000008911	TRMT13	75	72.611	ENSCAFG00000020021	TRMT13	99	72.611	Canis_familiaris
ENSTBEG00000008911	TRMT13	100	74.519	ENSCHIG00000015395	TRMT13	86	74.519	Capra_hircus
ENSTBEG00000008911	TRMT13	99	66.187	ENSTSYG00000010811	TRMT13	88	66.906	Carlito_syrichta
ENSTBEG00000008911	TRMT13	84	52.137	ENSCAPG00000009085	TRMT13	96	52.137	Cavia_aperea
ENSTBEG00000008911	TRMT13	99	72.289	ENSCPOG00000000694	TRMT13	86	72.289	Cavia_porcellus
ENSTBEG00000008911	TRMT13	100	75.962	ENSCCAG00000023772	TRMT13	86	75.962	Cebus_capucinus
ENSTBEG00000008911	TRMT13	99	76.386	ENSCATG00000033556	TRMT13	86	76.386	Cercocebus_atys
ENSTBEG00000008911	TRMT13	100	67.067	ENSCLAG00000008220	TRMT13	97	67.788	Chinchilla_lanigera
ENSTBEG00000008911	TRMT13	100	76.202	ENSCSAG00000001506	TRMT13	86	76.202	Chlorocebus_sabaeus
ENSTBEG00000008911	TRMT13	100	56.971	ENSCPBG00000026671	TRMT13	87	56.971	Chrysemys_picta_bellii
ENSTBEG00000008911	TRMT13	100	76.442	ENSCANG00000034659	TRMT13	86	76.442	Colobus_angolensis_palliatus
ENSTBEG00000008911	TRMT13	99	69.157	ENSCGRG00001021601	Trmt13	86	69.157	Cricetulus_griseus_chok1gshd
ENSTBEG00000008911	TRMT13	76	46.835	ENSCSEG00000000591	trmt13	66	46.835	Cynoglossus_semilaevis
ENSTBEG00000008911	TRMT13	98	37.857	ENSCVAG00000017342	trmt13	83	38.810	Cyprinodon_variegatus
ENSTBEG00000008911	TRMT13	98	46.078	ENSDARG00000102846	trmt13	85	46.078	Danio_rerio
ENSTBEG00000008911	TRMT13	100	70.433	ENSDORG00000015808	Trmt13	86	70.433	Dipodomys_ordii
ENSTBEG00000008911	TRMT13	74	37.762	FBgn0037435	CG18048	66	37.762	Drosophila_melanogaster
ENSTBEG00000008911	TRMT13	99	73.902	ENSETEG00000005819	TRMT13	85	73.902	Echinops_telfairi
ENSTBEG00000008911	TRMT13	98	35.122	ENSEBUG00000014444	trmt13	94	32.990	Eptatretus_burgeri
ENSTBEG00000008911	TRMT13	100	75.240	ENSEASG00005015918	TRMT13	86	75.240	Equus_asinus_asinus
ENSTBEG00000008911	TRMT13	100	75.481	ENSECAG00000022626	TRMT13	86	75.481	Equus_caballus
ENSTBEG00000008911	TRMT13	76	82.812	ENSEEUG00000000294	TRMT13	67	82.812	Erinaceus_europaeus
ENSTBEG00000008911	TRMT13	75	59.494	ENSELUG00000003803	trmt13	64	59.494	Esox_lucius
ENSTBEG00000008911	TRMT13	100	75.721	ENSFCAG00000030618	TRMT13	86	75.721	Felis_catus
ENSTBEG00000008911	TRMT13	87	70.253	ENSFALG00000002424	TRMT13	73	70.253	Ficedula_albicollis
ENSTBEG00000008911	TRMT13	99	73.236	ENSFDAG00000006342	TRMT13	85	73.236	Fukomys_damarensis
ENSTBEG00000008911	TRMT13	54	60.000	ENSFHEG00000022954	trmt13	65	48.765	Fundulus_heteroclitus
ENSTBEG00000008911	TRMT13	75	53.165	ENSGMOG00000013223	trmt13	64	53.165	Gadus_morhua
ENSTBEG00000008911	TRMT13	99	53.659	ENSGALG00000005290	TRMT13	85	53.808	Gallus_gallus
ENSTBEG00000008911	TRMT13	52	63.158	ENSGAFG00000001577	trmt13	51	63.158	Gambusia_affinis
ENSTBEG00000008911	TRMT13	75	49.390	ENSGACG00000013428	trmt13	68	48.810	Gasterosteus_aculeatus
ENSTBEG00000008911	TRMT13	100	57.794	ENSGAGG00000023303	TRMT13	87	57.794	Gopherus_agassizii
ENSTBEG00000008911	TRMT13	100	75.240	ENSGGOG00000005616	TRMT13	86	75.240	Gorilla_gorilla
ENSTBEG00000008911	TRMT13	99	42.686	ENSHBUG00000007754	trmt13	88	42.686	Haplochromis_burtoni
ENSTBEG00000008911	TRMT13	99	73.723	ENSHGLG00000002164	TRMT13	85	73.723	Heterocephalus_glaber_female
ENSTBEG00000008911	TRMT13	99	73.723	ENSHGLG00100001618	TRMT13	85	73.723	Heterocephalus_glaber_male
ENSTBEG00000008911	TRMT13	76	45.752	ENSHCOG00000020553	trmt13	66	45.752	Hippocampus_comes
ENSTBEG00000008911	TRMT13	98	44.335	ENSIPUG00000024787	trmt13	87	44.059	Ictalurus_punctatus
ENSTBEG00000008911	TRMT13	100	75.721	ENSSTOG00000013483	TRMT13	86	75.721	Ictidomys_tridecemlineatus
ENSTBEG00000008911	TRMT13	100	72.115	ENSJJAG00000018012	Trmt13	87	72.115	Jaculus_jaculus
ENSTBEG00000008911	TRMT13	74	38.264	ENSKMAG00000007639	trmt13	92	38.264	Kryptolebias_marmoratus
ENSTBEG00000008911	TRMT13	99	38.771	ENSLBEG00000020238	trmt13	89	40.094	Labrus_bergylta
ENSTBEG00000008911	TRMT13	99	48.434	ENSLACG00000013153	TRMT13	100	47.654	Latimeria_chalumnae
ENSTBEG00000008911	TRMT13	98	44.608	ENSLOCG00000000418	trmt13	70	61.392	Lepisosteus_oculatus
ENSTBEG00000008911	TRMT13	89	70.270	ENSLAFG00000002383	TRMT13	100	70.270	Loxodonta_africana
ENSTBEG00000008911	TRMT13	100	75.962	ENSMFAG00000034681	TRMT13	86	75.962	Macaca_fascicularis
ENSTBEG00000008911	TRMT13	100	75.962	ENSMMUG00000004243	TRMT13	86	75.962	Macaca_mulatta
ENSTBEG00000008911	TRMT13	100	75.962	ENSMNEG00000036102	TRMT13	86	75.962	Macaca_nemestrina
ENSTBEG00000008911	TRMT13	99	76.386	ENSMLEG00000034258	TRMT13	86	76.386	Mandrillus_leucophaeus
ENSTBEG00000008911	TRMT13	99	39.810	ENSMAMG00000016597	trmt13	88	39.810	Mastacembelus_armatus
ENSTBEG00000008911	TRMT13	99	41.966	ENSMZEG00005020959	trmt13	88	41.966	Maylandia_zebra
ENSTBEG00000008911	TRMT13	98	53.695	ENSMGAG00000006970	TRMT13	95	53.695	Meleagris_gallopavo
ENSTBEG00000008911	TRMT13	99	68.675	ENSMAUG00000010448	Trmt13	86	68.675	Mesocricetus_auratus
ENSTBEG00000008911	TRMT13	100	76.683	ENSMICG00000005283	TRMT13	86	76.683	Microcebus_murinus
ENSTBEG00000008911	TRMT13	99	66.506	ENSMOCG00000019914	Trmt13	86	66.506	Microtus_ochrogaster
ENSTBEG00000008911	TRMT13	100	61.631	ENSMODG00000003646	TRMT13	86	61.631	Monodelphis_domestica
ENSTBEG00000008911	TRMT13	99	41.584	ENSMALG00000020965	trmt13	86	41.584	Monopterus_albus
ENSTBEG00000008911	TRMT13	99	69.007	MGP_CAROLIEiJ_G0025568	Trmt13	88	86.076	Mus_caroli
ENSTBEG00000008911	TRMT13	99	69.734	ENSMUSG00000033439	Trmt13	88	86.076	Mus_musculus
ENSTBEG00000008911	TRMT13	99	69.976	MGP_PahariEiJ_G0027014	Trmt13	88	87.342	Mus_pahari
ENSTBEG00000008911	TRMT13	99	69.492	MGP_SPRETEiJ_G0026518	Trmt13	88	86.076	Mus_spretus
ENSTBEG00000008911	TRMT13	91	70.341	ENSMPUG00000002078	-	100	70.341	Mustela_putorius_furo
ENSTBEG00000008911	TRMT13	100	63.462	ENSMLUG00000002124	TRMT13	86	63.462	Myotis_lucifugus
ENSTBEG00000008911	TRMT13	98	42.469	ENSNBRG00000006783	trmt13	84	42.469	Neolamprologus_brichardi
ENSTBEG00000008911	TRMT13	100	75.721	ENSNLEG00000035917	TRMT13	86	75.721	Nomascus_leucogenys
ENSTBEG00000008911	TRMT13	99	42.446	ENSONIG00000004574	trmt13	88	42.446	Oreochromis_niloticus
ENSTBEG00000008911	TRMT13	99	58.213	ENSOANG00000012057	TRMT13	95	58.213	Ornithorhynchus_anatinus
ENSTBEG00000008911	TRMT13	100	73.558	ENSOCUG00000023095	TRMT13	86	73.558	Oryctolagus_cuniculus
ENSTBEG00000008911	TRMT13	99	35.337	ENSORLG00000003320	trmt13	88	35.337	Oryzias_latipes
ENSTBEG00000008911	TRMT13	75	50.685	ENSORLG00020005972	trmt13	67	51.282	Oryzias_latipes_hni
ENSTBEG00000008911	TRMT13	76	50.993	ENSORLG00015002270	trmt13	66	50.993	Oryzias_latipes_hsok
ENSTBEG00000008911	TRMT13	99	39.183	ENSOMEG00000006724	trmt13	86	39.043	Oryzias_melastigma
ENSTBEG00000008911	TRMT13	98	75.000	ENSOGAG00000005618	TRMT13	84	74.760	Otolemur_garnettii
ENSTBEG00000008911	TRMT13	100	74.519	ENSOARG00000017983	TRMT13	86	74.519	Ovis_aries
ENSTBEG00000008911	TRMT13	100	75.000	ENSPPAG00000043736	TRMT13	86	75.000	Pan_paniscus
ENSTBEG00000008911	TRMT13	100	76.202	ENSPPRG00000003424	TRMT13	86	76.202	Panthera_pardus
ENSTBEG00000008911	TRMT13	100	76.202	ENSPTIG00000018598	TRMT13	86	76.202	Panthera_tigris_altaica
ENSTBEG00000008911	TRMT13	88	87.975	ENSPTRG00000001001	TRMT13	74	87.975	Pan_troglodytes
ENSTBEG00000008911	TRMT13	100	76.202	ENSPANG00000007598	TRMT13	86	76.202	Papio_anubis
ENSTBEG00000008911	TRMT13	99	45.232	ENSPKIG00000001514	trmt13	87	45.232	Paramormyrops_kingsleyae
ENSTBEG00000008911	TRMT13	92	55.614	ENSPSIG00000012703	TRMT13	92	55.614	Pelodiscus_sinensis
ENSTBEG00000008911	TRMT13	86	50.000	ENSPMGG00000013298	trmt13	71	50.000	Periophthalmus_magnuspinnatus
ENSTBEG00000008911	TRMT13	99	67.952	ENSPEMG00000000275	Trmt13	86	67.952	Peromyscus_maniculatus_bairdii
ENSTBEG00000008911	TRMT13	74	48.148	ENSPMAG00000000823	trmt13	67	48.148	Petromyzon_marinus
ENSTBEG00000008911	TRMT13	100	62.500	ENSPCIG00000007699	TRMT13	86	62.500	Phascolarctos_cinereus
ENSTBEG00000008911	TRMT13	77	48.734	ENSPFOG00000008675	trmt13	67	48.734	Poecilia_formosa
ENSTBEG00000008911	TRMT13	75	47.337	ENSPLAG00000009709	trmt13	69	47.337	Poecilia_latipinna
ENSTBEG00000008911	TRMT13	74	46.207	ENSPMEG00000022954	trmt13	68	46.207	Poecilia_mexicana
ENSTBEG00000008911	TRMT13	61	45.652	ENSPREG00000005645	trmt13	52	45.652	Poecilia_reticulata
ENSTBEG00000008911	TRMT13	100	75.481	ENSPPYG00000001120	TRMT13	86	75.481	Pongo_abelii
ENSTBEG00000008911	TRMT13	100	72.596	ENSPCAG00000002340	TRMT13	86	72.596	Procavia_capensis
ENSTBEG00000008911	TRMT13	100	75.962	ENSPCOG00000017984	TRMT13	86	75.962	Propithecus_coquereli
ENSTBEG00000008911	TRMT13	99	75.422	ENSPVAG00000017430	TRMT13	86	75.422	Pteropus_vampyrus
ENSTBEG00000008911	TRMT13	99	42.469	ENSPNYG00000013690	trmt13	87	42.469	Pundamilia_nyererei
ENSTBEG00000008911	TRMT13	98	44.444	ENSPNAG00000022130	trmt13	86	44.444	Pygocentrus_nattereri
ENSTBEG00000008911	TRMT13	99	69.492	ENSRNOG00000015140	Trmt13	83	69.492	Rattus_norvegicus
ENSTBEG00000008911	TRMT13	100	76.442	ENSRBIG00000037686	TRMT13	86	76.442	Rhinopithecus_bieti
ENSTBEG00000008911	TRMT13	100	76.442	ENSRROG00000044057	TRMT13	86	76.442	Rhinopithecus_roxellana
ENSTBEG00000008911	TRMT13	100	75.721	ENSSBOG00000026541	TRMT13	86	75.721	Saimiri_boliviensis_boliviensis
ENSTBEG00000008911	TRMT13	100	62.019	ENSSHAG00000005213	TRMT13	92	62.019	Sarcophilus_harrisii
ENSTBEG00000008911	TRMT13	99	42.543	ENSSFOG00015017560	trmt13	86	43.032	Scleropages_formosus
ENSTBEG00000008911	TRMT13	99	39.151	ENSSMAG00000014592	trmt13	94	39.151	Scophthalmus_maximus
ENSTBEG00000008911	TRMT13	98	38.517	ENSSDUG00000015508	trmt13	86	38.407	Seriola_dumerili
ENSTBEG00000008911	TRMT13	98	38.902	ENSSLDG00000019060	trmt13	85	38.902	Seriola_lalandi_dorsalis
ENSTBEG00000008911	TRMT13	78	82.500	ENSSARG00000010344	TRMT13	67	82.500	Sorex_araneus
ENSTBEG00000008911	TRMT13	100	54.808	ENSSPUG00000016339	TRMT13	91	54.808	Sphenodon_punctatus
ENSTBEG00000008911	TRMT13	98	41.162	ENSSPAG00000011922	trmt13	88	41.388	Stegastes_partitus
ENSTBEG00000008911	TRMT13	100	75.481	ENSSSCG00000006869	TRMT13	86	75.481	Sus_scrofa
ENSTBEG00000008911	TRMT13	88	70.253	ENSTGUG00000005253	TRMT13	76	70.253	Taeniopygia_guttata
ENSTBEG00000008911	TRMT13	97	39.753	ENSTRUG00000008400	trmt13	86	39.952	Takifugu_rubripes
ENSTBEG00000008911	TRMT13	100	70.913	ENSUAMG00000017251	TRMT13	86	70.913	Ursus_americanus
ENSTBEG00000008911	TRMT13	100	74.519	ENSUMAG00000007901	TRMT13	96	74.519	Ursus_maritimus
ENSTBEG00000008911	TRMT13	100	72.596	ENSVPAG00000001034	TRMT13	96	72.596	Vicugna_pacos
ENSTBEG00000008911	TRMT13	99	75.181	ENSVVUG00000021996	TRMT13	86	75.181	Vulpes_vulpes
ENSTBEG00000008911	TRMT13	83	56.962	ENSXETG00000013204	trmt13	72	56.962	Xenopus_tropicalis
ENSTBEG00000008911	TRMT13	98	36.627	ENSXMAG00000010765	trmt13	87	36.627	Xiphophorus_maculatus