EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTBEG00000009035 (Gene tree)
Gene ID: -
Gene Symbol: PABPC4
Alias: APP-1|iPABP
Full Name: poly(A) binding protein cytoplasmic 4
Gene Type: protein_coding
Species: Tupaia_belangeri
Status: putative
Strand: Minus strand
Length: 10617 bases
Position: chrGeneScaffold_2083:302455-313071
Accession: 8557
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTBEP00000007841	PABP	PF00658.18	1.1e-31	1	1
ENSTBEP00000007841	RRM_1	PF00076.22	2.1e-40	1	3
ENSTBEP00000007841	RRM_1	PF00076.22	2.1e-40	2	3
ENSTBEP00000007841	RRM_1	PF00076.22	2.1e-40	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTBET00000009049	PABPC4-201	1770	-	ENSTBEP00000007841	590 (aa)	-	UPI0000F5FC6B

Gene Model

Click here to download ENSTBEG00000009035's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTBEG00000009035's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTBEG00000009035	PABPC4	52	52.131	ENSTBEG00000016482	PABPC5	83	52.131
ENSTBEG00000009035	PABPC4	72	67.568	ENSTBEG00000002851	PABPC1L	57	70.297
ENSTBEG00000009035	PABPC4	97	59.073	ENSTBEG00000009320	PABPC1	79	59.073

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTBEG00000009035	PABPC4	100	88.571	ENSG00000090621	PABPC4	99	100.000	Homo_sapiens
ENSTBEG00000009035	PABPC4	99	68.571	ENSAPOG00000001161	pabpc4	99	69.205	Acanthochromis_polyacanthus
ENSTBEG00000009035	PABPC4	100	88.067	ENSAMEG00000011535	-	99	88.067	Ailuropoda_melanoleuca
ENSTBEG00000009035	PABPC4	99	48.675	ENSAMEG00000015083	-	89	48.425	Ailuropoda_melanoleuca
ENSTBEG00000009035	PABPC4	100	69.371	ENSACIG00000023343	pabpc4	99	70.033	Amphilophus_citrinellus
ENSTBEG00000009035	PABPC4	79	88.889	ENSAOCG00000021529	pabpc4	90	86.111	Amphiprion_ocellaris
ENSTBEG00000009035	PABPC4	99	68.739	ENSAPEG00000019196	pabpc4	99	69.040	Amphiprion_percula
ENSTBEG00000009035	PABPC4	99	67.504	ENSATEG00000007402	pabpc4	99	68.595	Anabas_testudineus
ENSTBEG00000009035	PABPC4	99	77.609	ENSAPLG00000009729	-	99	77.609	Anas_platyrhynchos
ENSTBEG00000009035	PABPC4	99	76.020	ENSACAG00000002544	PABPC4	100	76.020	Anolis_carolinensis
ENSTBEG00000009035	PABPC4	100	88.403	ENSANAG00000025079	PABPC4	95	97.590	Aotus_nancymaae
ENSTBEG00000009035	PABPC4	100	68.377	ENSACLG00000019558	pabpc4	99	68.874	Astatotilapia_calliptera
ENSTBEG00000009035	PABPC4	99	66.836	ENSAMXG00000018779	pabpc4	98	67.513	Astyanax_mexicanus
ENSTBEG00000009035	PABPC4	100	84.396	ENSBTAG00000017125	PABPC4	99	84.564	Bos_taurus
ENSTBEG00000009035	PABPC4	100	88.403	ENSCJAG00000002512	-	99	88.403	Callithrix_jacchus
ENSTBEG00000009035	PABPC4	62	80.586	ENSCJAG00000045953	-	92	80.515	Callithrix_jacchus
ENSTBEG00000009035	PABPC4	100	88.067	ENSCAFG00000003081	PABPC4	99	83.866	Canis_familiaris
ENSTBEG00000009035	PABPC4	100	88.067	ENSCAFG00020004161	PABPC4	99	88.067	Canis_lupus_dingo
ENSTBEG00000009035	PABPC4	100	87.899	ENSCHIG00000019398	-	99	87.899	Capra_hircus
ENSTBEG00000009035	PABPC4	99	70.101	ENSCHIG00000023385	-	89	70.101	Capra_hircus
ENSTBEG00000009035	PABPC4	100	88.571	ENSTSYG00000006532	PABPC4	99	88.571	Carlito_syrichta
ENSTBEG00000009035	PABPC4	100	88.067	ENSCAPG00000015984	PABPC4	99	88.067	Cavia_aperea
ENSTBEG00000009035	PABPC4	100	88.067	ENSCPOG00000009552	PABPC4	99	88.067	Cavia_porcellus
ENSTBEG00000009035	PABPC4	100	88.403	ENSCCAG00000037306	PABPC4	99	88.403	Cebus_capucinus
ENSTBEG00000009035	PABPC4	100	88.571	ENSCATG00000042164	PABPC4	95	97.590	Cercocebus_atys
ENSTBEG00000009035	PABPC4	100	88.067	ENSCLAG00000011899	PABPC4	99	88.067	Chinchilla_lanigera
ENSTBEG00000009035	PABPC4	100	88.571	ENSCSAG00000001135	PABPC4	99	88.571	Chlorocebus_sabaeus
ENSTBEG00000009035	PABPC4	81	93.269	ENSCHOG00000005327	PABPC4	81	93.269	Choloepus_hoffmanni
ENSTBEG00000009035	PABPC4	99	77.104	ENSCPBG00000001038	PABPC4	99	77.104	Chrysemys_picta_bellii
ENSTBEG00000009035	PABPC4	100	88.403	ENSCANG00000034177	PABPC4	99	88.403	Colobus_angolensis_palliatus
ENSTBEG00000009035	PABPC4	98	86.689	ENSCGRG00001018166	Pabpc4	99	85.309	Cricetulus_griseus_chok1gshd
ENSTBEG00000009035	PABPC4	98	83.959	ENSCGRG00000009777	Pabpc4	99	82.638	Cricetulus_griseus_crigri
ENSTBEG00000009035	PABPC4	100	68.377	ENSCSEG00000000130	pabpc4	99	68.709	Cynoglossus_semilaevis
ENSTBEG00000009035	PABPC4	100	68.937	ENSCVAG00000019246	pabpc4	99	69.767	Cyprinodon_variegatus
ENSTBEG00000009035	PABPC4	99	69.983	ENSDARG00000059259	pabpc4	99	69.802	Danio_rerio
ENSTBEG00000009035	PABPC4	97	88.276	ENSDNOG00000018444	-	99	88.276	Dasypus_novemcinctus
ENSTBEG00000009035	PABPC4	100	85.546	ENSDORG00000011581	Pabpc4	99	85.546	Dipodomys_ordii
ENSTBEG00000009035	PABPC4	87	60.271	ENSETEG00000009172	-	93	60.345	Echinops_telfairi
ENSTBEG00000009035	PABPC4	89	88.844	ENSETEG00000018453	-	75	89.047	Echinops_telfairi
ENSTBEG00000009035	PABPC4	97	62.607	ENSEBUG00000013782	pabpc4	98	62.416	Eptatretus_burgeri
ENSTBEG00000009035	PABPC4	99	62.752	ENSEBUG00000000992	pabpc4	98	77.049	Eptatretus_burgeri
ENSTBEG00000009035	PABPC4	100	88.571	ENSEASG00005014119	PABPC4	99	88.571	Equus_asinus_asinus
ENSTBEG00000009035	PABPC4	100	88.571	ENSECAG00000009396	PABPC4	99	88.571	Equus_caballus
ENSTBEG00000009035	PABPC4	100	85.210	ENSEEUG00000002962	PABPC4	99	85.210	Erinaceus_europaeus
ENSTBEG00000009035	PABPC4	99	69.192	ENSELUG00000003195	pabpc4	98	69.900	Esox_lucius
ENSTBEG00000009035	PABPC4	100	88.235	ENSFCAG00000015254	-	99	88.235	Felis_catus
ENSTBEG00000009035	PABPC4	99	76.599	ENSFALG00000000543	PABPC4	99	76.599	Ficedula_albicollis
ENSTBEG00000009035	PABPC4	100	88.403	ENSFDAG00000020016	-	99	88.403	Fukomys_damarensis
ENSTBEG00000009035	PABPC4	99	57.432	ENSFDAG00000010581	-	100	57.432	Fukomys_damarensis
ENSTBEG00000009035	PABPC4	84	86.916	ENSFHEG00000007548	pabpc4	95	86.916	Fundulus_heteroclitus
ENSTBEG00000009035	PABPC4	99	68.007	ENSGMOG00000019025	pabpc4	98	69.012	Gadus_morhua
ENSTBEG00000009035	PABPC4	99	77.273	ENSGALG00000003800	PABPC4	99	77.273	Gallus_gallus
ENSTBEG00000009035	PABPC4	100	69.551	ENSGAFG00000018195	pabpc4	95	81.897	Gambusia_affinis
ENSTBEG00000009035	PABPC4	100	67.107	ENSGACG00000007179	pabpc4	99	67.822	Gasterosteus_aculeatus
ENSTBEG00000009035	PABPC4	99	77.104	ENSGAGG00000001888	PABPC4	99	77.104	Gopherus_agassizii
ENSTBEG00000009035	PABPC4	100	88.571	ENSGGOG00000004002	PABPC4	99	88.571	Gorilla_gorilla
ENSTBEG00000009035	PABPC4	100	68.543	ENSHBUG00000020206	pabpc4	99	69.040	Haplochromis_burtoni
ENSTBEG00000009035	PABPC4	100	88.571	ENSHGLG00000011162	PABPC4	99	88.571	Heterocephalus_glaber_female
ENSTBEG00000009035	PABPC4	100	85.882	ENSHGLG00100001580	PABPC4	99	85.882	Heterocephalus_glaber_male
ENSTBEG00000009035	PABPC4	100	68.491	ENSHCOG00000012694	pabpc4	99	69.154	Hippocampus_comes
ENSTBEG00000009035	PABPC4	98	67.973	ENSIPUG00000016620	pabpc4	99	68.885	Ictalurus_punctatus
ENSTBEG00000009035	PABPC4	100	85.714	ENSSTOG00000010416	PABPC4	99	85.714	Ictidomys_tridecemlineatus
ENSTBEG00000009035	PABPC4	100	84.848	ENSJJAG00000007781	Pabpc4	99	84.848	Jaculus_jaculus
ENSTBEG00000009035	PABPC4	99	68.500	ENSKMAG00000013597	pabpc4	98	68.781	Kryptolebias_marmoratus
ENSTBEG00000009035	PABPC4	100	68.152	ENSLBEG00000013654	pabpc4	99	68.595	Labrus_bergylta
ENSTBEG00000009035	PABPC4	99	73.746	ENSLACG00000011907	PABPC4	99	73.746	Latimeria_chalumnae
ENSTBEG00000009035	PABPC4	100	70.833	ENSLOCG00000001877	pabpc4	99	70.500	Lepisosteus_oculatus
ENSTBEG00000009035	PABPC4	100	88.067	ENSLAFG00000000151	PABPC4	99	88.067	Loxodonta_africana
ENSTBEG00000009035	PABPC4	100	88.571	ENSMFAG00000041481	PABPC4	99	88.571	Macaca_fascicularis
ENSTBEG00000009035	PABPC4	100	88.571	ENSMMUG00000007497	PABPC4	99	88.571	Macaca_mulatta
ENSTBEG00000009035	PABPC4	100	88.403	ENSMNEG00000043054	PABPC4	99	88.403	Macaca_nemestrina
ENSTBEG00000009035	PABPC4	100	88.571	ENSMLEG00000040716	PABPC4	95	97.590	Mandrillus_leucophaeus
ENSTBEG00000009035	PABPC4	99	68.571	ENSMAMG00000010025	pabpc4	98	68.667	Mastacembelus_armatus
ENSTBEG00000009035	PABPC4	100	68.377	ENSMZEG00005006141	pabpc4	91	87.736	Maylandia_zebra
ENSTBEG00000009035	PABPC4	99	77.479	ENSMGAG00000005408	PABPC4	99	77.479	Meleagris_gallopavo
ENSTBEG00000009035	PABPC4	59	100.000	ENSMAUG00000019763	-	65	95.413	Mesocricetus_auratus
ENSTBEG00000009035	PABPC4	51	85.990	ENSMAUG00000001295	-	97	85.990	Mesocricetus_auratus
ENSTBEG00000009035	PABPC4	88	82.252	ENSMICG00000016633	-	97	95.745	Microcebus_murinus
ENSTBEG00000009035	PABPC4	100	65.385	ENSMICG00000036729	-	73	96.137	Microcebus_murinus
ENSTBEG00000009035	PABPC4	99	87.075	ENSMOCG00000006763	Pabpc4	99	86.477	Microtus_ochrogaster
ENSTBEG00000009035	PABPC4	100	63.279	ENSMMOG00000002363	pabpc4	99	65.050	Mola_mola
ENSTBEG00000009035	PABPC4	53	57.278	ENSMODG00000018051	-	87	57.278	Monodelphis_domestica
ENSTBEG00000009035	PABPC4	98	78.216	ENSMODG00000017657	-	99	77.983	Monodelphis_domestica
ENSTBEG00000009035	PABPC4	99	68.174	ENSMALG00000011017	pabpc4	99	68.317	Monopterus_albus
ENSTBEG00000009035	PABPC4	100	86.723	MGP_CAROLIEiJ_G0026435	-	99	86.723	Mus_caroli
ENSTBEG00000009035	PABPC4	99	73.390	MGP_CAROLIEiJ_G0024864	-	100	73.390	Mus_caroli
ENSTBEG00000009035	PABPC4	100	86.723	ENSMUSG00000011257	Pabpc4	99	86.723	Mus_musculus
ENSTBEG00000009035	PABPC4	100	86.387	MGP_PahariEiJ_G0028765	Pabpc4	99	86.387	Mus_pahari
ENSTBEG00000009035	PABPC4	100	83.364	MGP_SPRETEiJ_G0027415	Pabpc4	99	83.364	Mus_spretus
ENSTBEG00000009035	PABPC4	96	47.038	ENSMPUG00000006836	-	91	45.993	Mustela_putorius_furo
ENSTBEG00000009035	PABPC4	100	88.235	ENSMPUG00000014414	-	99	88.235	Mustela_putorius_furo
ENSTBEG00000009035	PABPC4	100	81.176	ENSMLUG00000012068	PABPC4	99	81.176	Myotis_lucifugus
ENSTBEG00000009035	PABPC4	100	85.210	ENSNGAG00000018292	Pabpc4	99	85.210	Nannospalax_galili
ENSTBEG00000009035	PABPC4	60	73.684	ENSNBRG00000009708	pabpc4	97	73.684	Neolamprologus_brichardi
ENSTBEG00000009035	PABPC4	100	85.882	ENSNLEG00000011928	PABPC4	99	85.882	Nomascus_leucogenys
ENSTBEG00000009035	PABPC4	79	95.238	ENSOPRG00000011984	PABPC4	86	95.238	Ochotona_princeps
ENSTBEG00000009035	PABPC4	89	82.136	ENSODEG00000017434	-	94	91.892	Octodon_degus
ENSTBEG00000009035	PABPC4	100	87.563	ENSODEG00000006592	-	99	87.563	Octodon_degus
ENSTBEG00000009035	PABPC4	100	68.377	ENSONIG00000008176	pabpc4	99	68.709	Oreochromis_niloticus
ENSTBEG00000009035	PABPC4	99	76.936	ENSOANG00000010001	PABPC4	99	76.936	Ornithorhynchus_anatinus
ENSTBEG00000009035	PABPC4	95	87.654	ENSOCUG00000000562	PABPC4	88	87.654	Oryctolagus_cuniculus
ENSTBEG00000009035	PABPC4	99	68.340	ENSORLG00000017479	pabpc4	98	68.340	Oryzias_latipes
ENSTBEG00000009035	PABPC4	99	68.571	ENSORLG00020018644	pabpc4	90	85.577	Oryzias_latipes_hni
ENSTBEG00000009035	PABPC4	99	68.571	ENSORLG00015015042	pabpc4	89	80.800	Oryzias_latipes_hsok
ENSTBEG00000009035	PABPC4	99	68.908	ENSOMEG00000014410	pabpc4	98	79.661	Oryzias_melastigma
ENSTBEG00000009035	PABPC4	100	84.615	ENSOGAG00000004067	PABPC4	99	84.783	Otolemur_garnettii
ENSTBEG00000009035	PABPC4	100	87.899	ENSOARG00000020060	PABPC4	99	87.899	Ovis_aries
ENSTBEG00000009035	PABPC4	100	88.571	ENSPPAG00000043625	PABPC4	99	88.571	Pan_paniscus
ENSTBEG00000009035	PABPC4	100	88.235	ENSPPRG00000024727	PABPC4	99	88.235	Panthera_pardus
ENSTBEG00000009035	PABPC4	100	88.235	ENSPTIG00000005829	PABPC4	99	88.235	Panthera_tigris_altaica
ENSTBEG00000009035	PABPC4	100	88.571	ENSPTRG00000000573	PABPC4	99	88.571	Pan_troglodytes
ENSTBEG00000009035	PABPC4	100	88.403	ENSPANG00000009484	PABPC4	97	95.669	Papio_anubis
ENSTBEG00000009035	PABPC4	99	69.900	ENSPKIG00000025356	pabpc4	98	70.401	Paramormyrops_kingsleyae
ENSTBEG00000009035	PABPC4	99	77.104	ENSPSIG00000016892	PABPC4	99	77.104	Pelodiscus_sinensis
ENSTBEG00000009035	PABPC4	100	64.430	ENSPMGG00000009073	pabpc4	93	81.600	Periophthalmus_magnuspinnatus
ENSTBEG00000009035	PABPC4	100	79.966	ENSPEMG00000024193	-	99	79.966	Peromyscus_maniculatus_bairdii
ENSTBEG00000009035	PABPC4	100	85.882	ENSPEMG00000023569	-	99	85.882	Peromyscus_maniculatus_bairdii
ENSTBEG00000009035	PABPC4	86	62.209	ENSPMAG00000007885	pabpc4	99	61.985	Petromyzon_marinus
ENSTBEG00000009035	PABPC4	88	57.671	ENSPMAG00000002836	pabpc4	99	57.856	Petromyzon_marinus
ENSTBEG00000009035	PABPC4	98	77.835	ENSPCIG00000020674	PABPC4	95	87.500	Phascolarctos_cinereus
ENSTBEG00000009035	PABPC4	100	67.993	ENSPFOG00000002682	pabpc4	99	68.988	Poecilia_formosa
ENSTBEG00000009035	PABPC4	100	68.159	ENSPLAG00000010112	pabpc4	99	69.486	Poecilia_latipinna
ENSTBEG00000009035	PABPC4	99	68.297	ENSPMEG00000019739	pabpc4	99	69.154	Poecilia_mexicana
ENSTBEG00000009035	PABPC4	100	68.657	ENSPREG00000001589	pabpc4	92	82.400	Poecilia_reticulata
ENSTBEG00000009035	PABPC4	100	88.571	ENSPPYG00000001506	PABPC4	99	88.571	Pongo_abelii
ENSTBEG00000009035	PABPC4	100	82.689	ENSPCAG00000003341	PABPC4	99	82.689	Procavia_capensis
ENSTBEG00000009035	PABPC4	79	94.059	ENSPCOG00000025882	-	88	94.059	Propithecus_coquereli
ENSTBEG00000009035	PABPC4	100	87.752	ENSPCOG00000023725	-	99	87.919	Propithecus_coquereli
ENSTBEG00000009035	PABPC4	100	87.731	ENSPVAG00000002187	PABPC4	100	87.731	Pteropus_vampyrus
ENSTBEG00000009035	PABPC4	100	68.377	ENSPNYG00000006134	pabpc4	99	68.874	Pundamilia_nyererei
ENSTBEG00000009035	PABPC4	100	68.605	ENSPNAG00000024355	pabpc4	99	68.771	Pygocentrus_nattereri
ENSTBEG00000009035	PABPC4	100	82.828	ENSRNOG00000028592	AABR07035074.1	99	82.828	Rattus_norvegicus
ENSTBEG00000009035	PABPC4	100	84.202	ENSRNOG00000015642	Pabpc4	99	84.202	Rattus_norvegicus
ENSTBEG00000009035	PABPC4	100	88.571	ENSRBIG00000039761	PABPC4	99	88.571	Rhinopithecus_bieti
ENSTBEG00000009035	PABPC4	100	88.571	ENSRROG00000033355	PABPC4	99	88.571	Rhinopithecus_roxellana
ENSTBEG00000009035	PABPC4	100	88.235	ENSSBOG00000026193	PABPC4	99	88.235	Saimiri_boliviensis_boliviensis
ENSTBEG00000009035	PABPC4	98	77.663	ENSSHAG00000018139	PABPC4	99	77.441	Sarcophilus_harrisii
ENSTBEG00000009035	PABPC4	99	70.903	ENSSFOG00015023514	pabpc4	95	70.667	Scleropages_formosus
ENSTBEG00000009035	PABPC4	99	68.289	ENSSMAG00000009007	pabpc4	98	68.624	Scophthalmus_maximus
ENSTBEG00000009035	PABPC4	99	68.235	ENSSDUG00000012683	pabpc4	94	85.217	Seriola_dumerili
ENSTBEG00000009035	PABPC4	99	68.235	ENSSLDG00000013025	pabpc4	95	85.217	Seriola_lalandi_dorsalis
ENSTBEG00000009035	PABPC4	100	87.227	ENSSARG00000000310	PABPC4	94	87.227	Sorex_araneus
ENSTBEG00000009035	PABPC4	99	76.768	ENSSPUG00000003204	PABPC4	99	76.768	Sphenodon_punctatus
ENSTBEG00000009035	PABPC4	99	68.960	ENSSPAG00000009252	pabpc4	96	85.841	Stegastes_partitus
ENSTBEG00000009035	PABPC4	99	46.555	ENSSSCG00000036170	-	96	46.387	Sus_scrofa
ENSTBEG00000009035	PABPC4	100	88.067	ENSSSCG00000003660	-	99	88.067	Sus_scrofa
ENSTBEG00000009035	PABPC4	99	77.181	ENSTGUG00000001266	PABPC4	99	77.181	Taeniopygia_guttata
ENSTBEG00000009035	PABPC4	100	68.220	ENSTRUG00000005907	pabpc4	98	68.220	Takifugu_rubripes
ENSTBEG00000009035	PABPC4	100	64.214	ENSTNIG00000016902	pabpc4	98	64.214	Tetraodon_nigroviridis
ENSTBEG00000009035	PABPC4	100	84.034	ENSTTRG00000014340	PABPC4	100	84.034	Tursiops_truncatus
ENSTBEG00000009035	PABPC4	100	87.899	ENSUAMG00000000303	PABPC4	99	87.899	Ursus_americanus
ENSTBEG00000009035	PABPC4	100	87.899	ENSUMAG00000019585	PABPC4	99	99.057	Ursus_maritimus
ENSTBEG00000009035	PABPC4	71	96.429	ENSVPAG00000010041	PABPC4	57	96.429	Vicugna_pacos
ENSTBEG00000009035	PABPC4	100	88.067	ENSVVUG00000005215	PABPC4	99	88.067	Vulpes_vulpes
ENSTBEG00000009035	PABPC4	99	69.140	ENSXETG00000010946	pabpc4	92	69.140	Xenopus_tropicalis
ENSTBEG00000009035	PABPC4	100	68.729	ENSXCOG00000013190	pabpc4	93	81.897	Xiphophorus_couchianus
ENSTBEG00000009035	PABPC4	100	68.657	ENSXMAG00000019007	pabpc4	99	69.486	Xiphophorus_maculatus