EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTBEG00000010043 (Gene tree)
Gene ID: -
Gene Symbol: APOBEC1
Alias: APOBEC-1|BEDP|CDAR1|HEPR
Full Name: apolipoprotein B mRNA editing enzyme catalytic subunit 1
Gene Type: protein_coding
Species: Tupaia_belangeri
Status: putative
Strand: Minus strand
Length: 131632 bases
Position: chrGeneScaffold_1365:777-132408
Accession: 604
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTBEP00000008682	APOBEC_N	PF08210.11	3.9e-27	1	1
ENSTBEP00000008682	APOBEC_C	PF05240.14	3.9e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTBET00000010033	APOBEC1-201	705	-	ENSTBEP00000008682	234 (aa)	-	UPI0000F5E924

Gene Model

Click here to download ENSTBEG00000010043's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTBEG00000010043's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTBEG00000010043	APOBEC1	94	75.113	ENSG00000111701	APOBEC1	94	75.113	Homo_sapiens
ENSTBEG00000010043	APOBEC1	94	76.471	ENSAMEG00000007098	APOBEC1	94	76.471	Ailuropoda_melanoleuca
ENSTBEG00000010043	APOBEC1	72	37.870	ENSACAG00000028578	-	93	37.870	Anolis_carolinensis
ENSTBEG00000010043	APOBEC1	94	74.208	ENSANAG00000027743	APOBEC1	89	74.208	Aotus_nancymaae
ENSTBEG00000010043	APOBEC1	94	67.873	ENSBTAG00000014683	APOBEC1	94	67.873	Bos_taurus
ENSTBEG00000010043	APOBEC1	94	73.303	ENSCJAG00000005398	APOBEC1	100	73.303	Callithrix_jacchus
ENSTBEG00000010043	APOBEC1	94	75.113	ENSCAFG00000013901	APOBEC1	94	75.113	Canis_familiaris
ENSTBEG00000010043	APOBEC1	94	75.566	ENSCAFG00020003511	APOBEC1	92	75.566	Canis_lupus_dingo
ENSTBEG00000010043	APOBEC1	94	67.873	ENSCHIG00000011898	APOBEC1	95	65.158	Capra_hircus
ENSTBEG00000010043	APOBEC1	55	74.419	ENSTSYG00000029141	APOBEC1	91	74.419	Carlito_syrichta
ENSTBEG00000010043	APOBEC1	91	67.290	ENSCAPG00000015882	-	99	67.290	Cavia_aperea
ENSTBEG00000010043	APOBEC1	99	61.277	ENSCPOG00000033068	APOBEC1	99	61.277	Cavia_porcellus
ENSTBEG00000010043	APOBEC1	94	74.661	ENSCCAG00000022258	APOBEC1	94	74.661	Cebus_capucinus
ENSTBEG00000010043	APOBEC1	94	77.376	ENSCATG00000021613	APOBEC1	89	77.376	Cercocebus_atys
ENSTBEG00000010043	APOBEC1	97	64.629	ENSCLAG00000014645	APOBEC1	99	64.629	Chinchilla_lanigera
ENSTBEG00000010043	APOBEC1	80	77.368	ENSCSAG00000009817	APOBEC1	99	77.368	Chlorocebus_sabaeus
ENSTBEG00000010043	APOBEC1	80	44.271	ENSCPBG00000014327	-	72	44.271	Chrysemys_picta_bellii
ENSTBEG00000010043	APOBEC1	80	44.271	ENSCPBG00000014328	-	84	44.271	Chrysemys_picta_bellii
ENSTBEG00000010043	APOBEC1	81	45.596	ENSCPBG00000014329	-	53	45.596	Chrysemys_picta_bellii
ENSTBEG00000010043	APOBEC1	81	42.857	ENSCPBG00000017398	-	89	42.857	Chrysemys_picta_bellii
ENSTBEG00000010043	APOBEC1	72	48.837	ENSCPBG00000014335	-	70	48.837	Chrysemys_picta_bellii
ENSTBEG00000010043	APOBEC1	88	40.952	ENSCPBG00000014331	-	84	40.952	Chrysemys_picta_bellii
ENSTBEG00000010043	APOBEC1	94	77.376	ENSCANG00000038359	APOBEC1	96	77.376	Colobus_angolensis_palliatus
ENSTBEG00000010043	APOBEC1	91	67.290	ENSCGRG00001011130	Apobec1	93	67.290	Cricetulus_griseus_chok1gshd
ENSTBEG00000010043	APOBEC1	91	67.290	ENSCGRG00000008644	Apobec1	93	67.290	Cricetulus_griseus_crigri
ENSTBEG00000010043	APOBEC1	94	74.661	ENSDNOG00000010926	APOBEC1	94	74.661	Dasypus_novemcinctus
ENSTBEG00000010043	APOBEC1	90	63.084	ENSDORG00000023717	Apobec1	100	63.084	Dipodomys_ordii
ENSTBEG00000010043	APOBEC1	99	69.362	ENSETEG00000004867	APOBEC1	99	69.362	Echinops_telfairi
ENSTBEG00000010043	APOBEC1	94	76.471	ENSEASG00005015951	APOBEC1	93	76.471	Equus_asinus_asinus
ENSTBEG00000010043	APOBEC1	80	75.789	ENSECAG00000017163	APOBEC1	99	75.789	Equus_caballus
ENSTBEG00000010043	APOBEC1	86	53.922	ENSEEUG00000007530	-	97	53.922	Erinaceus_europaeus
ENSTBEG00000010043	APOBEC1	93	65.455	ENSEEUG00000009112	-	98	65.455	Erinaceus_europaeus
ENSTBEG00000010043	APOBEC1	94	75.113	ENSFCAG00000009350	APOBEC1	94	75.113	Felis_catus
ENSTBEG00000010043	APOBEC1	60	46.099	ENSFALG00000007257	-	70	46.099	Ficedula_albicollis
ENSTBEG00000010043	APOBEC1	88	58.454	ENSFDAG00000018470	APOBEC1	99	58.454	Fukomys_damarensis
ENSTBEG00000010043	APOBEC1	68	47.531	ENSGAGG00000004947	-	81	50.769	Gopherus_agassizii
ENSTBEG00000010043	APOBEC1	82	42.347	ENSGAGG00000021744	-	76	42.347	Gopherus_agassizii
ENSTBEG00000010043	APOBEC1	72	40.678	ENSGAGG00000021745	-	64	40.678	Gopherus_agassizii
ENSTBEG00000010043	APOBEC1	85	47.059	ENSGAGG00000011837	-	88	51.667	Gopherus_agassizii
ENSTBEG00000010043	APOBEC1	72	45.614	ENSGAGG00000006624	-	62	45.614	Gopherus_agassizii
ENSTBEG00000010043	APOBEC1	99	61.702	ENSHGLG00000001495	APOBEC1	99	61.702	Heterocephalus_glaber_female
ENSTBEG00000010043	APOBEC1	99	62.553	ENSHGLG00100002187	APOBEC1	99	62.553	Heterocephalus_glaber_male
ENSTBEG00000010043	APOBEC1	91	61.502	ENSSTOG00000021971	APOBEC1	100	76.531	Ictidomys_tridecemlineatus
ENSTBEG00000010043	APOBEC1	97	66.376	ENSJJAG00000022108	Apobec1	100	66.376	Jaculus_jaculus
ENSTBEG00000010043	APOBEC1	94	72.851	ENSLAFG00000030837	APOBEC1	99	72.851	Loxodonta_africana
ENSTBEG00000010043	APOBEC1	94	77.376	ENSMFAG00000000277	APOBEC1	99	77.368	Macaca_fascicularis
ENSTBEG00000010043	APOBEC1	94	76.923	ENSMNEG00000029670	APOBEC1	94	76.923	Macaca_nemestrina
ENSTBEG00000010043	APOBEC1	94	77.376	ENSMLEG00000036301	APOBEC1	94	77.376	Mandrillus_leucophaeus
ENSTBEG00000010043	APOBEC1	91	67.757	ENSMAUG00000022167	Apobec1	96	67.757	Mesocricetus_auratus
ENSTBEG00000010043	APOBEC1	94	72.851	ENSMICG00000043645	APOBEC1	96	72.851	Microcebus_murinus
ENSTBEG00000010043	APOBEC1	94	61.086	ENSMODG00000018004	APOBEC1	94	61.086	Monodelphis_domestica
ENSTBEG00000010043	APOBEC1	90	69.014	ENSMUSG00000040613	Apobec1	93	69.014	Mus_musculus
ENSTBEG00000010043	APOBEC1	90	67.606	MGP_PahariEiJ_G0022580	-	93	67.606	Mus_pahari
ENSTBEG00000010043	APOBEC1	90	69.014	MGP_SPRETEiJ_G0029857	Apobec1	93	69.014	Mus_spretus
ENSTBEG00000010043	APOBEC1	94	71.946	ENSMPUG00000017532	APOBEC1	94	71.946	Mustela_putorius_furo
ENSTBEG00000010043	APOBEC1	91	71.495	ENSNGAG00000022607	Apobec1	93	71.495	Nannospalax_galili
ENSTBEG00000010043	APOBEC1	94	76.471	ENSNLEG00000005342	APOBEC1	94	76.471	Nomascus_leucogenys
ENSTBEG00000010043	APOBEC1	94	62.443	ENSMEUG00000013406	APOBEC1	94	62.443	Notamacropus_eugenii
ENSTBEG00000010043	APOBEC1	73	63.158	ENSOPRG00000009508	-	95	63.158	Ochotona_princeps
ENSTBEG00000010043	APOBEC1	94	69.231	ENSOCUG00000025736	APOBEC1	83	69.231	Oryctolagus_cuniculus
ENSTBEG00000010043	APOBEC1	94	73.756	ENSOGAG00000026415	APOBEC1	94	73.756	Otolemur_garnettii
ENSTBEG00000010043	APOBEC1	94	66.968	ENSOARG00000002072	APOBEC1	92	66.968	Ovis_aries
ENSTBEG00000010043	APOBEC1	94	70.455	ENSPPAG00000027657	APOBEC1	93	70.455	Pan_paniscus
ENSTBEG00000010043	APOBEC1	94	75.566	ENSPPRG00000012182	APOBEC1	94	75.566	Panthera_pardus
ENSTBEG00000010043	APOBEC1	94	75.566	ENSPTIG00000020280	APOBEC1	94	75.566	Panthera_tigris_altaica
ENSTBEG00000010043	APOBEC1	94	76.471	ENSPTRG00000004614	APOBEC1	94	76.471	Pan_troglodytes
ENSTBEG00000010043	APOBEC1	94	77.828	ENSPANG00000021027	APOBEC1	94	77.828	Papio_anubis
ENSTBEG00000010043	APOBEC1	72	46.199	ENSPSIG00000012568	-	74	46.199	Pelodiscus_sinensis
ENSTBEG00000010043	APOBEC1	53	49.541	ENSPSIG00000012791	-	73	49.541	Pelodiscus_sinensis
ENSTBEG00000010043	APOBEC1	97	64.629	ENSPEMG00000023841	Apobec1	100	64.629	Peromyscus_maniculatus_bairdii
ENSTBEG00000010043	APOBEC1	94	64.706	ENSPCIG00000023973	APOBEC1	94	64.706	Phascolarctos_cinereus
ENSTBEG00000010043	APOBEC1	94	75.566	ENSPPYG00000004228	APOBEC1	89	75.566	Pongo_abelii
ENSTBEG00000010043	APOBEC1	73	73.256	ENSPCAG00000008733	APOBEC1	92	73.256	Procavia_capensis
ENSTBEG00000010043	APOBEC1	94	74.661	ENSPCOG00000013957	APOBEC1	98	74.661	Propithecus_coquereli
ENSTBEG00000010043	APOBEC1	94	59.091	ENSPVAG00000010709	APOBEC1	94	59.091	Pteropus_vampyrus
ENSTBEG00000010043	APOBEC1	90	66.667	ENSRNOG00000015411	Apobec1	93	66.667	Rattus_norvegicus
ENSTBEG00000010043	APOBEC1	94	76.018	ENSRBIG00000031161	APOBEC1	94	76.018	Rhinopithecus_bieti
ENSTBEG00000010043	APOBEC1	94	76.018	ENSRROG00000033576	APOBEC1	99	75.789	Rhinopithecus_roxellana
ENSTBEG00000010043	APOBEC1	73	76.744	ENSSBOG00000030587	APOBEC1	97	76.744	Saimiri_boliviensis_boliviensis
ENSTBEG00000010043	APOBEC1	94	64.253	ENSSHAG00000008925	APOBEC1	97	64.253	Sarcophilus_harrisii
ENSTBEG00000010043	APOBEC1	56	68.702	ENSSARG00000011972	-	99	68.702	Sorex_araneus
ENSTBEG00000010043	APOBEC1	73	63.372	ENSSARG00000000032	-	100	63.372	Sorex_araneus
ENSTBEG00000010043	APOBEC1	85	42.439	ENSSPUG00000009044	-	78	42.439	Sphenodon_punctatus
ENSTBEG00000010043	APOBEC1	94	73.303	ENSSSCG00000000668	APOBEC1	94	73.303	Sus_scrofa
ENSTBEG00000010043	APOBEC1	61	48.966	ENSTGUG00000013118	-	99	48.966	Taeniopygia_guttata
ENSTBEG00000010043	APOBEC1	73	69.186	ENSTTRG00000014015	APOBEC1	92	69.186	Tursiops_truncatus
ENSTBEG00000010043	APOBEC1	94	76.018	ENSUAMG00000011636	APOBEC1	91	76.018	Ursus_americanus
ENSTBEG00000010043	APOBEC1	94	76.018	ENSUMAG00000016552	APOBEC1	91	76.018	Ursus_maritimus
ENSTBEG00000010043	APOBEC1	94	69.231	ENSVPAG00000001343	APOBEC1	94	69.231	Vicugna_pacos
ENSTBEG00000010043	APOBEC1	94	76.923	ENSVVUG00000010522	APOBEC1	94	76.923	Vulpes_vulpes