EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTBEG00000010407 (Gene tree)
Gene ID: -
Gene Symbol: PARN
Alias: DAN
Full Name: poly(A)-specific ribonuclease
Gene Type: protein_coding
Species: Tupaia_belangeri
Status: putative
Strand: Minus strand
Length: 256631 bases
Position: chrGeneScaffold_2788:105809-362439
Accession: 8609
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTBEP00000009022	RNA_bind	PF08675.11	7.8e-34	1	1
ENSTBEP00000009022	CAF1	PF04857.20	6.3e-35	1	2
ENSTBEP00000009022	CAF1	PF04857.20	6.3e-35	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTBET00000010434	PARN-201	1716	-	ENSTBEP00000009022	571 (aa)	-	UPI0000F60105

Gene Model

Click here to download ENSTBEG00000010407's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTBEG00000010407's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTBEG00000010407	PARN	100	79.828	ENSG00000140694	PARN	100	79.931	Homo_sapiens
ENSTBEG00000010407	PARN	100	78.448	ENSAMEG00000011208	PARN	91	78.448	Ailuropoda_melanoleuca
ENSTBEG00000010407	PARN	81	66.173	ENSACIG00000000619	parn	74	66.105	Amphilophus_citrinellus
ENSTBEG00000010407	PARN	90	60.788	ENSAOCG00000003465	parn	74	60.788	Amphiprion_ocellaris
ENSTBEG00000010407	PARN	81	65.751	ENSAPEG00000010661	parn	91	65.751	Amphiprion_percula
ENSTBEG00000010407	PARN	99	58.418	ENSATEG00000004661	parn	80	59.964	Anabas_testudineus
ENSTBEG00000010407	PARN	100	70.639	ENSAPLG00000013914	PARN	91	70.639	Anas_platyrhynchos
ENSTBEG00000010407	PARN	100	64.467	ENSACAG00000004973	PARN	91	65.482	Anolis_carolinensis
ENSTBEG00000010407	PARN	100	78.966	ENSANAG00000031516	PARN	91	78.966	Aotus_nancymaae
ENSTBEG00000010407	PARN	90	62.928	ENSACLG00000004742	parn	75	62.928	Astatotilapia_calliptera
ENSTBEG00000010407	PARN	89	62.597	ENSAMXG00000012390	parn	83	60.659	Astyanax_mexicanus
ENSTBEG00000010407	PARN	99	79.203	ENSBTAG00000018097	PARN	100	79.203	Bos_taurus
ENSTBEG00000010407	PARN	100	79.138	ENSCJAG00000015866	PARN	91	79.138	Callithrix_jacchus
ENSTBEG00000010407	PARN	100	78.756	ENSCAFG00000018795	PARN	91	78.756	Canis_familiaris
ENSTBEG00000010407	PARN	100	78.756	ENSCAFG00020024126	PARN	91	78.756	Canis_lupus_dingo
ENSTBEG00000010407	PARN	100	79.102	ENSCHIG00000018143	PARN	91	79.102	Capra_hircus
ENSTBEG00000010407	PARN	71	56.829	ENSCAPG00000007984	PARN	68	56.829	Cavia_aperea
ENSTBEG00000010407	PARN	100	76.166	ENSCPOG00000002263	PARN	91	76.166	Cavia_porcellus
ENSTBEG00000010407	PARN	100	79.310	ENSCCAG00000030367	PARN	91	79.310	Cebus_capucinus
ENSTBEG00000010407	PARN	100	66.897	ENSCATG00000041368	PARN	86	81.707	Cercocebus_atys
ENSTBEG00000010407	PARN	100	76.511	ENSCLAG00000015406	PARN	90	76.511	Chinchilla_lanigera
ENSTBEG00000010407	PARN	100	79.655	ENSCSAG00000008142	PARN	91	79.655	Chlorocebus_sabaeus
ENSTBEG00000010407	PARN	100	61.140	ENSCHOG00000007014	PARN	91	61.140	Choloepus_hoffmanni
ENSTBEG00000010407	PARN	97	72.193	ENSCPBG00000006609	PARN	97	72.193	Chrysemys_picta_bellii
ENSTBEG00000010407	PARN	78	36.287	ENSCING00000010142	-	89	36.076	Ciona_intestinalis
ENSTBEG00000010407	PARN	100	72.041	ENSCANG00000028849	-	90	72.041	Colobus_angolensis_palliatus
ENSTBEG00000010407	PARN	100	73.540	ENSCGRG00001012096	Parn	91	73.540	Cricetulus_griseus_chok1gshd
ENSTBEG00000010407	PARN	100	73.540	ENSCGRG00000004939	Parn	91	73.540	Cricetulus_griseus_crigri
ENSTBEG00000010407	PARN	100	52.283	ENSCSEG00000002064	parn	75	58.052	Cynoglossus_semilaevis
ENSTBEG00000010407	PARN	90	61.069	ENSCVAG00000014848	parn	74	60.687	Cyprinodon_variegatus
ENSTBEG00000010407	PARN	100	53.936	ENSDARG00000102634	parn	73	61.814	Danio_rerio
ENSTBEG00000010407	PARN	100	78.756	ENSDNOG00000000833	PARN	91	78.756	Dasypus_novemcinctus
ENSTBEG00000010407	PARN	71	77.215	ENSETEG00000014828	-	68	77.215	Echinops_telfairi
ENSTBEG00000010407	PARN	100	79.102	ENSEASG00005011400	PARN	91	79.102	Equus_asinus_asinus
ENSTBEG00000010407	PARN	100	79.102	ENSECAG00000017792	PARN	91	79.102	Equus_caballus
ENSTBEG00000010407	PARN	74	92.593	ENSEEUG00000010370	PARN	67	92.593	Erinaceus_europaeus
ENSTBEG00000010407	PARN	91	59.294	ENSELUG00000013139	parn	69	59.294	Esox_lucius
ENSTBEG00000010407	PARN	100	78.929	ENSFCAG00000044961	PARN	91	78.929	Felis_catus
ENSTBEG00000010407	PARN	100	70.294	ENSFALG00000003911	PARN	90	70.294	Ficedula_albicollis
ENSTBEG00000010407	PARN	100	76.166	ENSFDAG00000009234	PARN	91	76.166	Fukomys_damarensis
ENSTBEG00000010407	PARN	91	57.736	ENSFHEG00000013738	parn	80	57.358	Fundulus_heteroclitus
ENSTBEG00000010407	PARN	81	63.025	ENSGMOG00000003231	parn	87	63.025	Gadus_morhua
ENSTBEG00000010407	PARN	100	68.739	ENSGALG00000003091	PARN	91	68.739	Gallus_gallus
ENSTBEG00000010407	PARN	89	61.450	ENSGAFG00000011061	parn	76	61.194	Gambusia_affinis
ENSTBEG00000010407	PARN	100	57.725	ENSGACG00000019501	parn	91	58.065	Gasterosteus_aculeatus
ENSTBEG00000010407	PARN	51	76.610	ENSGAGG00000023281	PARN	76	77.133	Gopherus_agassizii
ENSTBEG00000010407	PARN	97	79.893	ENSGGOG00000025224	PARN	92	78.261	Gorilla_gorilla
ENSTBEG00000010407	PARN	90	62.928	ENSHBUG00000017906	parn	80	64.854	Haplochromis_burtoni
ENSTBEG00000010407	PARN	100	75.993	ENSHGLG00000010886	PARN	91	75.993	Heterocephalus_glaber_female
ENSTBEG00000010407	PARN	100	75.993	ENSHGLG00100014659	PARN	91	75.993	Heterocephalus_glaber_male
ENSTBEG00000010407	PARN	81	60.168	ENSHCOG00000008683	parn	82	60.168	Hippocampus_comes
ENSTBEG00000010407	PARN	89	51.556	ENSIPUG00000012401	parn	74	51.248	Ictalurus_punctatus
ENSTBEG00000010407	PARN	100	77.029	ENSSTOG00000007519	PARN	91	77.029	Ictidomys_tridecemlineatus
ENSTBEG00000010407	PARN	100	74.611	ENSJJAG00000023049	Parn	91	74.611	Jaculus_jaculus
ENSTBEG00000010407	PARN	90	62.500	ENSKMAG00000009462	parn	75	62.500	Kryptolebias_marmoratus
ENSTBEG00000010407	PARN	90	61.437	ENSLBEG00000009167	parn	80	61.437	Labrus_bergylta
ENSTBEG00000010407	PARN	77	67.706	ENSLACG00000004207	PARN	85	67.706	Latimeria_chalumnae
ENSTBEG00000010407	PARN	91	62.970	ENSLOCG00000000715	parn	76	62.571	Lepisosteus_oculatus
ENSTBEG00000010407	PARN	100	78.066	ENSLAFG00000015036	PARN	91	78.066	Loxodonta_africana
ENSTBEG00000010407	PARN	99	79.931	ENSMFAG00000044852	PARN	100	79.931	Macaca_fascicularis
ENSTBEG00000010407	PARN	100	79.655	ENSMMUG00000018849	PARN	91	79.655	Macaca_mulatta
ENSTBEG00000010407	PARN	100	79.828	ENSMNEG00000045108	PARN	91	79.828	Macaca_nemestrina
ENSTBEG00000010407	PARN	100	79.655	ENSMLEG00000031743	PARN	100	79.758	Mandrillus_leucophaeus
ENSTBEG00000010407	PARN	94	59.574	ENSMAMG00000006939	parn	80	59.220	Mastacembelus_armatus
ENSTBEG00000010407	PARN	90	62.928	ENSMZEG00005013590	parn	80	63.900	Maylandia_zebra
ENSTBEG00000010407	PARN	100	68.566	ENSMGAG00000001004	PARN	91	68.566	Meleagris_gallopavo
ENSTBEG00000010407	PARN	100	70.678	ENSMAUG00000008025	Parn	94	70.847	Mesocricetus_auratus
ENSTBEG00000010407	PARN	100	80.484	ENSMICG00000016053	PARN	88	83.744	Microcebus_murinus
ENSTBEG00000010407	PARN	75	75.172	ENSMOCG00000022211	Parn	88	75.172	Microtus_ochrogaster
ENSTBEG00000010407	PARN	81	63.713	ENSMMOG00000011333	parn	77	63.713	Mola_mola
ENSTBEG00000010407	PARN	75	77.241	ENSMODG00000004915	PARN	87	77.241	Monodelphis_domestica
ENSTBEG00000010407	PARN	89	62.906	ENSMALG00000019426	parn	81	66.876	Monopterus_albus
ENSTBEG00000010407	PARN	100	73.748	MGP_CAROLIEiJ_G0020466	Parn	91	73.748	Mus_caroli
ENSTBEG00000010407	PARN	100	73.748	ENSMUSG00000022685	Parn	91	73.748	Mus_musculus
ENSTBEG00000010407	PARN	100	73.402	MGP_PahariEiJ_G0016172	Parn	91	73.402	Mus_pahari
ENSTBEG00000010407	PARN	100	73.748	MGP_SPRETEiJ_G0021361	Parn	91	73.748	Mus_spretus
ENSTBEG00000010407	PARN	100	78.066	ENSMPUG00000014464	PARN	91	78.066	Mustela_putorius_furo
ENSTBEG00000010407	PARN	75	76.552	ENSMLUG00000005414	PARN	88	76.552	Myotis_lucifugus
ENSTBEG00000010407	PARN	81	64.496	ENSNBRG00000006805	parn	80	64.496	Neolamprologus_brichardi
ENSTBEG00000010407	PARN	100	79.310	ENSNLEG00000010241	PARN	91	79.310	Nomascus_leucogenys
ENSTBEG00000010407	PARN	83	86.364	ENSMEUG00000008178	-	75	86.364	Notamacropus_eugenii
ENSTBEG00000010407	PARN	100	72.021	ENSOPRG00000012187	PARN	92	72.021	Ochotona_princeps
ENSTBEG00000010407	PARN	100	70.069	ENSODEG00000001617	PARN	90	70.069	Octodon_degus
ENSTBEG00000010407	PARN	100	57.667	ENSONIG00000000151	parn	91	58.615	Oreochromis_niloticus
ENSTBEG00000010407	PARN	66	74.737	ENSOANG00000020155	-	97	74.737	Ornithorhynchus_anatinus
ENSTBEG00000010407	PARN	100	78.066	ENSOCUG00000000322	PARN	91	78.066	Oryctolagus_cuniculus
ENSTBEG00000010407	PARN	94	59.636	ENSORLG00020010313	parn	80	59.636	Oryzias_latipes_hni
ENSTBEG00000010407	PARN	94	59.818	ENSORLG00015000300	parn	80	59.818	Oryzias_latipes_hsok
ENSTBEG00000010407	PARN	91	61.321	ENSOMEG00000019555	parn	76	61.321	Oryzias_melastigma
ENSTBEG00000010407	PARN	75	75.058	ENSOGAG00000014626	PARN	88	75.058	Otolemur_garnettii
ENSTBEG00000010407	PARN	75	78.391	ENSOARG00000007574	PARN	88	78.391	Ovis_aries
ENSTBEG00000010407	PARN	100	79.483	ENSPPAG00000031438	PARN	91	79.483	Pan_paniscus
ENSTBEG00000010407	PARN	100	78.929	ENSPPRG00000018583	PARN	91	78.929	Panthera_pardus
ENSTBEG00000010407	PARN	100	78.756	ENSPTIG00000012135	PARN	91	78.756	Panthera_tigris_altaica
ENSTBEG00000010407	PARN	100	79.483	ENSPTRG00000007792	PARN	91	79.483	Pan_troglodytes
ENSTBEG00000010407	PARN	100	76.552	ENSPANG00000020099	PARN	91	76.379	Papio_anubis
ENSTBEG00000010407	PARN	90	61.877	ENSPKIG00000022807	parn	86	54.367	Paramormyrops_kingsleyae
ENSTBEG00000010407	PARN	99	70.537	ENSPSIG00000014804	PARN	100	70.537	Pelodiscus_sinensis
ENSTBEG00000010407	PARN	78	65.419	ENSPMGG00000014431	parn	68	62.348	Periophthalmus_magnuspinnatus
ENSTBEG00000010407	PARN	100	70.639	ENSPEMG00000018439	Parn	91	70.639	Peromyscus_maniculatus_bairdii
ENSTBEG00000010407	PARN	79	57.143	ENSPMAG00000003956	parn	88	57.143	Petromyzon_marinus
ENSTBEG00000010407	PARN	62	64.917	ENSPCIG00000001259	PARN	78	64.917	Phascolarctos_cinereus
ENSTBEG00000010407	PARN	89	61.877	ENSPFOG00000012823	parn	75	61.236	Poecilia_formosa
ENSTBEG00000010407	PARN	89	62.069	ENSPLAG00000006395	parn	75	61.423	Poecilia_latipinna
ENSTBEG00000010407	PARN	89	61.877	ENSPMEG00000007711	parn	75	61.423	Poecilia_mexicana
ENSTBEG00000010407	PARN	89	61.686	ENSPREG00000000147	parn	75	61.236	Poecilia_reticulata
ENSTBEG00000010407	PARN	100	79.655	ENSPPYG00000007123	PARN	90	79.655	Pongo_abelii
ENSTBEG00000010407	PARN	100	67.530	ENSPCAG00000001741	PARN	96	67.530	Procavia_capensis
ENSTBEG00000010407	PARN	100	77.893	ENSPCOG00000019292	PARN	91	77.893	Propithecus_coquereli
ENSTBEG00000010407	PARN	100	75.820	ENSPVAG00000002547	PARN	92	75.820	Pteropus_vampyrus
ENSTBEG00000010407	PARN	90	62.928	ENSPNYG00000006835	parn	80	61.506	Pundamilia_nyererei
ENSTBEG00000010407	PARN	90	62.023	ENSPNAG00000018905	parn	84	62.023	Pygocentrus_nattereri
ENSTBEG00000010407	PARN	100	71.357	ENSRNOG00000002912	Parn	97	73.469	Rattus_norvegicus
ENSTBEG00000010407	PARN	58	87.688	ENSRBIG00000018726	PARN	100	87.688	Rhinopithecus_bieti
ENSTBEG00000010407	PARN	58	87.688	ENSRROG00000011162	-	100	87.688	Rhinopithecus_roxellana
ENSTBEG00000010407	PARN	100	77.586	ENSSBOG00000034726	PARN	88	82.555	Saimiri_boliviensis_boliviensis
ENSTBEG00000010407	PARN	62	73.077	ENSSHAG00000008493	PARN	81	73.077	Sarcophilus_harrisii
ENSTBEG00000010407	PARN	95	60.650	ENSSFOG00015014165	parn	85	60.681	Scleropages_formosus
ENSTBEG00000010407	PARN	100	51.269	ENSSMAG00000000685	parn	90	51.777	Scophthalmus_maximus
ENSTBEG00000010407	PARN	89	61.977	ENSSDUG00000014555	parn	74	61.977	Seriola_dumerili
ENSTBEG00000010407	PARN	100	65.976	ENSSARG00000014339	PARN	100	65.976	Sorex_araneus
ENSTBEG00000010407	PARN	100	72.021	ENSSPUG00000007719	PARN	91	72.021	Sphenodon_punctatus
ENSTBEG00000010407	PARN	90	61.914	ENSSPAG00000007095	parn	76	64.059	Stegastes_partitus
ENSTBEG00000010407	PARN	100	77.720	ENSSSCG00000007878	PARN	81	77.720	Sus_scrofa
ENSTBEG00000010407	PARN	100	70.294	ENSTGUG00000004971	PARN	91	70.294	Taeniopygia_guttata
ENSTBEG00000010407	PARN	100	58.092	ENSTNIG00000008252	parn	91	58.262	Tetraodon_nigroviridis
ENSTBEG00000010407	PARN	100	73.748	ENSTTRG00000002843	PARN	92	73.748	Tursiops_truncatus
ENSTBEG00000010407	PARN	77	64.444	ENSUAMG00000008283	PARN	90	66.055	Ursus_americanus
ENSTBEG00000010407	PARN	100	78.584	ENSUMAG00000004527	PARN	91	78.584	Ursus_maritimus
ENSTBEG00000010407	PARN	97	75.445	ENSVPAG00000008968	PARN	92	75.445	Vicugna_pacos
ENSTBEG00000010407	PARN	100	79.275	ENSVVUG00000019509	PARN	91	79.275	Vulpes_vulpes
ENSTBEG00000010407	PARN	100	62.867	ENSXETG00000010994	parn	89	68.737	Xenopus_tropicalis
ENSTBEG00000010407	PARN	89	59.266	ENSXCOG00000015990	parn	86	59.057	Xiphophorus_couchianus
ENSTBEG00000010407	PARN	91	61.308	ENSXMAG00000014783	parn	76	61.308	Xiphophorus_maculatus