EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTBEG00000011021 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Tupaia_belangeri
Status: putative
Strand: Minus strand
Length: 16432 bases
Position: chrGeneScaffold_4076:756310-772741
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTBEP00000009524	PPR	PF01535.20	1.1e-14	1	2
ENSTBEP00000009524	PPR	PF01535.20	1.1e-14	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTBET00000011014	-	2112	-	ENSTBEP00000009524	703 (aa)	-	UPI0000F60804

Gene Model

Click here to download ENSTBEG00000011021's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTBEG00000011021's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTBEG00000011021	-	100	74.053	ENSG00000106246	PTCD1	100	74.194	Homo_sapiens
ENSTBEG00000011021	-	100	74.053	ENSG00000248919	ATP5MF-PTCD1	93	74.194	Homo_sapiens
ENSTBEG00000011021	-	88	44.462	ENSAPOG00000010679	ptcd1	90	44.462	Acanthochromis_polyacanthus
ENSTBEG00000011021	-	100	78.138	ENSAMEG00000006224	-	93	78.138	Ailuropoda_melanoleuca
ENSTBEG00000011021	-	86	48.613	ENSACIG00000017861	ptcd1	86	48.613	Amphilophus_citrinellus
ENSTBEG00000011021	-	83	46.587	ENSAOCG00000022617	ptcd1	85	46.587	Amphiprion_ocellaris
ENSTBEG00000011021	-	87	47.394	ENSAOCG00000020741	-	84	47.394	Amphiprion_ocellaris
ENSTBEG00000011021	-	95	45.588	ENSAPEG00000022632	ptcd1	93	45.588	Amphiprion_percula
ENSTBEG00000011021	-	94	46.988	ENSATEG00000007016	ptcd1	88	46.818	Anabas_testudineus
ENSTBEG00000011021	-	88	59.649	ENSAPLG00000006862	-	96	59.242	Anas_platyrhynchos
ENSTBEG00000011021	-	92	57.903	ENSACAG00000012871	-	86	57.903	Anolis_carolinensis
ENSTBEG00000011021	-	97	75.723	ENSANAG00000035790	-	99	75.867	Aotus_nancymaae
ENSTBEG00000011021	-	84	48.744	ENSACLG00000002824	ptcd1	80	48.744	Astatotilapia_calliptera
ENSTBEG00000011021	-	88	47.416	ENSAMXG00000037292	ptcd1	91	47.147	Astyanax_mexicanus
ENSTBEG00000011021	-	100	76.554	ENSBTAG00000020440	-	87	76.836	Bos_taurus
ENSTBEG00000011021	-	100	75.493	ENSCJAG00000015815	-	100	75.634	Callithrix_jacchus
ENSTBEG00000011021	-	100	77.433	ENSCAFG00000015055	-	93	77.433	Canis_familiaris
ENSTBEG00000011021	-	100	77.433	ENSCAFG00020014480	-	93	77.433	Canis_lupus_dingo
ENSTBEG00000011021	-	100	75.989	ENSCHIG00000027000	-	99	75.989	Capra_hircus
ENSTBEG00000011021	-	100	79.237	ENSTSYG00000029495	-	100	79.661	Carlito_syrichta
ENSTBEG00000011021	-	93	75.189	ENSCAPG00000014660	-	100	75.189	Cavia_aperea
ENSTBEG00000011021	-	100	74.189	ENSCPOG00000001780	-	100	74.189	Cavia_porcellus
ENSTBEG00000011021	-	100	75.176	ENSCCAG00000034025	-	100	76.271	Cebus_capucinus
ENSTBEG00000011021	-	100	74.230	ENSCATG00000040859	-	100	74.650	Cercocebus_atys
ENSTBEG00000011021	-	98	76.040	ENSCLAG00000006354	-	100	75.317	Chinchilla_lanigera
ENSTBEG00000011021	-	91	73.547	ENSCSAG00000017794	-	95	74.006	Chlorocebus_sabaeus
ENSTBEG00000011021	-	93	56.996	ENSCPBG00000020866	-	91	57.290	Chrysemys_picta_bellii
ENSTBEG00000011021	-	83	30.213	ENSCING00000007717	-	97	30.378	Ciona_intestinalis
ENSTBEG00000011021	-	100	73.315	ENSCANG00000023441	-	100	73.736	Colobus_angolensis_palliatus
ENSTBEG00000011021	-	100	73.164	ENSCGRG00001023686	Ptcd1	100	73.164	Cricetulus_griseus_chok1gshd
ENSTBEG00000011021	-	99	72.612	ENSCGRG00000015031	Ptcd1	100	72.612	Cricetulus_griseus_crigri
ENSTBEG00000011021	-	90	44.914	ENSCSEG00000002378	ptcd1	85	44.914	Cynoglossus_semilaevis
ENSTBEG00000011021	-	88	46.677	ENSCVAG00000003621	ptcd1	90	46.677	Cyprinodon_variegatus
ENSTBEG00000011021	-	86	47.496	ENSCVAG00000015826	ptcd1	83	47.496	Cyprinodon_variegatus
ENSTBEG00000011021	-	91	47.440	ENSDARG00000076176	ptcd1	94	47.440	Danio_rerio
ENSTBEG00000011021	-	100	74.579	ENSDNOG00000009957	-	100	75.000	Dasypus_novemcinctus
ENSTBEG00000011021	-	98	74.601	ENSDORG00000000740	Ptcd1	99	74.601	Dipodomys_ordii
ENSTBEG00000011021	-	88	41.168	ENSEBUG00000014515	ptcd1	99	41.077	Eptatretus_burgeri
ENSTBEG00000011021	-	100	78.822	ENSEASG00005002480	-	100	79.383	Equus_asinus_asinus
ENSTBEG00000011021	-	100	79.243	ENSECAG00000016617	-	100	79.663	Equus_caballus
ENSTBEG00000011021	-	88	45.176	ENSELUG00000016517	ptcd1	86	45.176	Esox_lucius
ENSTBEG00000011021	-	100	78.279	ENSFCAG00000015069	-	100	78.420	Felis_catus
ENSTBEG00000011021	-	95	57.303	ENSFALG00000013803	-	96	57.992	Ficedula_albicollis
ENSTBEG00000011021	-	100	75.141	ENSFDAG00000006393	-	100	75.141	Fukomys_damarensis
ENSTBEG00000011021	-	79	45.965	ENSFHEG00000012491	ptcd1	93	45.965	Fundulus_heteroclitus
ENSTBEG00000011021	-	83	47.692	ENSGMOG00000007639	ptcd1	91	47.692	Gadus_morhua
ENSTBEG00000011021	-	88	58.675	ENSGALG00000004711	-	99	54.495	Gallus_gallus
ENSTBEG00000011021	-	86	46.840	ENSGAFG00000013175	ptcd1	88	45.794	Gambusia_affinis
ENSTBEG00000011021	-	85	47.876	ENSGACG00000016607	ptcd1	91	48.214	Gasterosteus_aculeatus
ENSTBEG00000011021	-	86	57.749	ENSGAGG00000021832	-	91	57.912	Gopherus_agassizii
ENSTBEG00000011021	-	99	74.262	ENSGGOG00000015123	-	99	74.402	Gorilla_gorilla
ENSTBEG00000011021	-	84	49.079	ENSHBUG00000018275	ptcd1	80	49.079	Haplochromis_burtoni
ENSTBEG00000011021	-	100	74.471	ENSHGLG00000017621	-	100	74.471	Heterocephalus_glaber_female
ENSTBEG00000011021	-	100	74.471	ENSHGLG00100007218	-	100	74.471	Heterocephalus_glaber_male
ENSTBEG00000011021	-	93	44.292	ENSHCOG00000010784	ptcd1	90	44.444	Hippocampus_comes
ENSTBEG00000011021	-	100	75.456	ENSSTOG00000001682	-	100	75.456	Ictidomys_tridecemlineatus
ENSTBEG00000011021	-	100	73.864	ENSJJAG00000000319	Ptcd1	100	73.864	Jaculus_jaculus
ENSTBEG00000011021	-	84	47.466	ENSKMAG00000008708	ptcd1	81	47.466	Kryptolebias_marmoratus
ENSTBEG00000011021	-	89	45.440	ENSLBEG00000008061	ptcd1	85	45.755	Labrus_bergylta
ENSTBEG00000011021	-	87	56.340	ENSLACG00000011172	ptcd1	86	56.661	Latimeria_chalumnae
ENSTBEG00000011021	-	90	53.092	ENSLOCG00000004833	ptcd1	99	52.322	Lepisosteus_oculatus
ENSTBEG00000011021	-	100	71.289	ENSLAFG00000002588	-	100	72.129	Loxodonta_africana
ENSTBEG00000011021	-	100	74.090	ENSMFAG00000041324	-	100	74.510	Macaca_fascicularis
ENSTBEG00000011021	-	100	73.950	ENSMMUG00000030408	-	100	74.370	Macaca_mulatta
ENSTBEG00000011021	-	100	74.090	ENSMNEG00000043786	-	100	74.510	Macaca_nemestrina
ENSTBEG00000011021	-	100	56.583	ENSMLEG00000031179	-	100	59.104	Mandrillus_leucophaeus
ENSTBEG00000011021	-	89	47.937	ENSMAMG00000007623	ptcd1	85	47.937	Mastacembelus_armatus
ENSTBEG00000011021	-	84	48.409	ENSMZEG00005012722	ptcd1	80	48.409	Maylandia_zebra
ENSTBEG00000011021	-	93	56.632	ENSMGAG00000004211	-	86	56.781	Meleagris_gallopavo
ENSTBEG00000011021	-	99	79.030	ENSMICG00000017428	-	99	79.173	Microcebus_murinus
ENSTBEG00000011021	-	84	47.475	ENSMMOG00000020243	ptcd1	88	47.475	Mola_mola
ENSTBEG00000011021	-	99	59.140	ENSMODG00000001350	-	99	59.140	Monodelphis_domestica
ENSTBEG00000011021	-	85	48.773	ENSMALG00000018442	ptcd1	81	48.773	Monopterus_albus
ENSTBEG00000011021	-	99	73.894	MGP_CAROLIEiJ_G0028011	Ptcd1	99	74.037	Mus_caroli
ENSTBEG00000011021	-	99	73.752	ENSMUSG00000029624	Ptcd1	99	73.894	Mus_musculus
ENSTBEG00000011021	-	99	74.148	MGP_PahariEiJ_G0024580	Ptcd1	99	74.290	Mus_pahari
ENSTBEG00000011021	-	99	74.322	MGP_SPRETEiJ_G0029012	Ptcd1	99	74.465	Mus_spretus
ENSTBEG00000011021	-	100	76.305	ENSMPUG00000016518	-	100	77.151	Mustela_putorius_furo
ENSTBEG00000011021	-	100	79.102	ENSMLUG00000010994	-	94	79.383	Myotis_lucifugus
ENSTBEG00000011021	-	85	47.869	ENSNBRG00000010079	ptcd1	85	47.869	Neolamprologus_brichardi
ENSTBEG00000011021	-	79	78.339	ENSNLEG00000011060	-	93	78.339	Nomascus_leucogenys
ENSTBEG00000011021	-	98	60.455	ENSMEUG00000006930	-	99	60.455	Notamacropus_eugenii
ENSTBEG00000011021	-	90	75.058	ENSOPRG00000013647	-	90	75.058	Ochotona_princeps
ENSTBEG00000011021	-	84	47.236	ENSONIG00000003168	ptcd1	95	47.236	Oreochromis_niloticus
ENSTBEG00000011021	-	82	56.186	ENSOANG00000007728	-	76	56.186	Ornithorhynchus_anatinus
ENSTBEG00000011021	-	99	73.975	ENSOCUG00000010584	-	98	73.975	Oryctolagus_cuniculus
ENSTBEG00000011021	-	86	46.656	ENSORLG00000009275	ptcd1	85	46.656	Oryzias_latipes
ENSTBEG00000011021	-	86	46.656	ENSORLG00020000988	ptcd1	85	46.656	Oryzias_latipes_hni
ENSTBEG00000011021	-	86	46.078	ENSORLG00015010557	ptcd1	85	46.078	Oryzias_latipes_hsok
ENSTBEG00000011021	-	86	47.273	ENSOMEG00000020627	ptcd1	87	47.273	Oryzias_melastigma
ENSTBEG00000011021	-	99	76.353	ENSOGAG00000010877	-	100	76.353	Otolemur_garnettii
ENSTBEG00000011021	-	100	71.509	ENSOARG00000018676	-	100	71.509	Ovis_aries
ENSTBEG00000011021	-	100	73.633	ENSPPAG00000036024	-	100	73.773	Pan_paniscus
ENSTBEG00000011021	-	100	79.232	ENSPPRG00000003478	-	100	79.232	Panthera_pardus
ENSTBEG00000011021	-	100	73.729	ENSPTRG00000019452	-	100	73.870	Pan_troglodytes
ENSTBEG00000011021	-	100	74.230	ENSPANG00000016730	-	100	74.650	Papio_anubis
ENSTBEG00000011021	-	92	49.924	ENSPKIG00000014215	ptcd1	94	49.924	Paramormyrops_kingsleyae
ENSTBEG00000011021	-	85	58.541	ENSPSIG00000011184	-	100	58.979	Pelodiscus_sinensis
ENSTBEG00000011021	-	74	43.536	ENSPMAG00000009667	ptcd1	100	43.536	Petromyzon_marinus
ENSTBEG00000011021	-	89	63.963	ENSPCIG00000024778	-	99	58.839	Phascolarctos_cinereus
ENSTBEG00000011021	-	84	48.013	ENSPFOG00000004458	ptcd1	82	48.013	Poecilia_formosa
ENSTBEG00000011021	-	86	47.488	ENSPLAG00000011051	ptcd1	82	48.013	Poecilia_latipinna
ENSTBEG00000011021	-	84	48.013	ENSPMEG00000020547	ptcd1	82	48.013	Poecilia_mexicana
ENSTBEG00000011021	-	85	47.300	ENSPREG00000000059	ptcd1	88	46.022	Poecilia_reticulata
ENSTBEG00000011021	-	95	75.559	ENSPPYG00000017377	-	99	75.559	Pongo_abelii
ENSTBEG00000011021	-	82	78.169	ENSPCAG00000001852	-	89	78.169	Procavia_capensis
ENSTBEG00000011021	-	99	78.865	ENSPCOG00000018596	-	99	79.291	Propithecus_coquereli
ENSTBEG00000011021	-	67	84.000	ENSPVAG00000007529	-	73	84.000	Pteropus_vampyrus
ENSTBEG00000011021	-	84	48.409	ENSPNYG00000019993	ptcd1	80	48.409	Pundamilia_nyererei
ENSTBEG00000011021	-	97	48.641	ENSPNAG00000014931	ptcd1	98	48.784	Pygocentrus_nattereri
ENSTBEG00000011021	-	99	74.496	ENSRNOG00000000987	Ptcd1	99	74.640	Rattus_norvegicus
ENSTBEG00000011021	-	100	73.876	ENSRBIG00000043393	-	100	74.298	Rhinopithecus_bieti
ENSTBEG00000011021	-	100	73.876	ENSRROG00000036420	-	100	74.298	Rhinopithecus_roxellana
ENSTBEG00000011021	-	100	75.634	ENSSBOG00000024114	-	100	75.775	Saimiri_boliviensis_boliviensis
ENSTBEG00000011021	-	98	57.473	ENSSHAG00000011376	-	98	61.364	Sarcophilus_harrisii
ENSTBEG00000011021	-	90	52.842	ENSSFOG00015007909	ptcd1	86	53.067	Scleropages_formosus
ENSTBEG00000011021	-	87	45.265	ENSSMAG00000000218	ptcd1	95	45.048	Scophthalmus_maximus
ENSTBEG00000011021	-	97	44.763	ENSSDUG00000015671	ptcd1	95	44.763	Seriola_dumerili
ENSTBEG00000011021	-	96	44.748	ENSSLDG00000014261	ptcd1	93	44.748	Seriola_lalandi_dorsalis
ENSTBEG00000011021	-	88	56.502	ENSSPUG00000003540	-	86	57.276	Sphenodon_punctatus
ENSTBEG00000011021	-	95	45.494	ENSSPAG00000011049	ptcd1	89	45.962	Stegastes_partitus
ENSTBEG00000011021	-	93	80.184	ENSSSCG00000007622	-	99	79.248	Sus_scrofa
ENSTBEG00000011021	-	88	60.454	ENSTGUG00000007563	-	99	61.129	Taeniopygia_guttata
ENSTBEG00000011021	-	90	46.845	ENSTRUG00000013471	ptcd1	84	46.845	Takifugu_rubripes
ENSTBEG00000011021	-	86	46.569	ENSTNIG00000008271	ptcd1	85	46.569	Tetraodon_nigroviridis
ENSTBEG00000011021	-	100	75.141	ENSTTRG00000003006	-	100	75.141	Tursiops_truncatus
ENSTBEG00000011021	-	100	78.138	ENSUAMG00000008049	-	100	78.279	Ursus_americanus
ENSTBEG00000011021	-	99	77.479	ENSVVUG00000008836	-	100	77.479	Vulpes_vulpes
ENSTBEG00000011021	-	85	53.667	ENSXETG00000009891	ptcd1	88	52.894	Xenopus_tropicalis
ENSTBEG00000011021	-	86	47.368	ENSXMAG00000015540	ptcd1	88	46.445	Xiphophorus_maculatus