EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTBEG00000011409 (Gene tree)
Gene ID: -
Gene Symbol: SRP54
Alias: -
Full Name: signal recognition particle 54
Gene Type: protein_coding
Species: Tupaia_belangeri
Status: putative
Strand: Plus strand
Length: 28308 bases
Position: chrGeneScaffold_856:870-29177
Accession: 11301
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTBEP00000009868	SRP54	PF00448.22	2.4e-78	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTBET00000011420	SRP54-201	1344	-	ENSTBEP00000009868	447 (aa)	-	UPI0000F5D8A5

Gene Model

Click here to download ENSTBEG00000011409's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTBEG00000011409's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTBEG00000011409	SRP54	100	91.499	ENSG00000100883	SRP54	100	91.591	Homo_sapiens
ENSTBEG00000011409	SRP54	100	87.025	ENSAPOG00000011314	srp54	89	87.025	Acanthochromis_polyacanthus
ENSTBEG00000011409	SRP54	100	91.499	ENSAMEG00000015544	SRP54	89	91.499	Ailuropoda_melanoleuca
ENSTBEG00000011409	SRP54	88	84.439	ENSACIG00000022831	srp54	85	84.439	Amphilophus_citrinellus
ENSTBEG00000011409	SRP54	100	87.025	ENSAOCG00000019401	srp54	89	87.025	Amphiprion_ocellaris
ENSTBEG00000011409	SRP54	100	87.025	ENSAPEG00000001977	srp54	94	87.025	Amphiprion_percula
ENSTBEG00000011409	SRP54	100	87.472	ENSATEG00000013877	srp54	89	87.472	Anabas_testudineus
ENSTBEG00000011409	SRP54	93	89.448	ENSAPLG00000010125	SRP54	83	89.448	Anas_platyrhynchos
ENSTBEG00000011409	SRP54	100	90.157	ENSACAG00000002103	-	89	90.157	Anolis_carolinensis
ENSTBEG00000011409	SRP54	73	70.997	ENSACAG00000001124	-	100	70.997	Anolis_carolinensis
ENSTBEG00000011409	SRP54	97	87.327	ENSACAG00000010631	-	100	87.327	Anolis_carolinensis
ENSTBEG00000011409	SRP54	100	91.499	ENSANAG00000022133	SRP54	89	91.499	Aotus_nancymaae
ENSTBEG00000011409	SRP54	100	87.248	ENSACLG00000015866	srp54	89	87.248	Astatotilapia_calliptera
ENSTBEG00000011409	SRP54	100	86.801	ENSAMXG00000032669	SRP54	89	86.801	Astyanax_mexicanus
ENSTBEG00000011409	SRP54	100	91.499	ENSBTAG00000019085	SRP54	89	91.499	Bos_taurus
ENSTBEG00000011409	SRP54	98	66.136	WBGene00009012	F21D5.7	88	66.136	Caenorhabditis_elegans
ENSTBEG00000011409	SRP54	100	91.499	ENSCJAG00000006581	SRP54	98	91.499	Callithrix_jacchus
ENSTBEG00000011409	SRP54	100	91.499	ENSCAFG00000013331	SRP54	89	91.499	Canis_familiaris
ENSTBEG00000011409	SRP54	100	91.499	ENSCAFG00020023427	SRP54	89	91.499	Canis_lupus_dingo
ENSTBEG00000011409	SRP54	100	91.499	ENSCHIG00000026345	SRP54	89	91.499	Capra_hircus
ENSTBEG00000011409	SRP54	94	78.947	ENSTSYG00000035333	-	81	78.947	Carlito_syrichta
ENSTBEG00000011409	SRP54	100	91.275	ENSTSYG00000002680	-	98	91.275	Carlito_syrichta
ENSTBEG00000011409	SRP54	72	100.000	ENSCAPG00000008780	SRP54	73	100.000	Cavia_aperea
ENSTBEG00000011409	SRP54	100	91.051	ENSCPOG00000003691	SRP54	89	91.051	Cavia_porcellus
ENSTBEG00000011409	SRP54	94	91.169	ENSCCAG00000024179	SRP54	100	91.169	Cebus_capucinus
ENSTBEG00000011409	SRP54	100	91.499	ENSCATG00000034083	SRP54	98	91.499	Cercocebus_atys
ENSTBEG00000011409	SRP54	100	91.499	ENSCLAG00000015076	SRP54	89	91.499	Chinchilla_lanigera
ENSTBEG00000011409	SRP54	100	91.499	ENSCSAG00000015575	SRP54	89	91.499	Chlorocebus_sabaeus
ENSTBEG00000011409	SRP54	95	78.066	ENSCHOG00000008986	SRP54	88	78.066	Choloepus_hoffmanni
ENSTBEG00000011409	SRP54	100	90.604	ENSCPBG00000026195	SRP54	89	90.604	Chrysemys_picta_bellii
ENSTBEG00000011409	SRP54	100	76.063	ENSCING00000007380	-	89	76.063	Ciona_intestinalis
ENSTBEG00000011409	SRP54	100	91.499	ENSCANG00000028532	SRP54	98	91.499	Colobus_angolensis_palliatus
ENSTBEG00000011409	SRP54	100	91.051	ENSCGRG00001009525	-	89	91.051	Cricetulus_griseus_chok1gshd
ENSTBEG00000011409	SRP54	66	98.299	ENSCGRG00000009453	-	68	98.299	Cricetulus_griseus_crigri
ENSTBEG00000011409	SRP54	100	86.353	ENSCSEG00000012392	srp54	89	86.353	Cynoglossus_semilaevis
ENSTBEG00000011409	SRP54	100	87.025	ENSCVAG00000010395	srp54	89	87.025	Cyprinodon_variegatus
ENSTBEG00000011409	SRP54	100	87.248	ENSDARG00000098367	srp54	89	87.248	Danio_rerio
ENSTBEG00000011409	SRP54	100	91.499	ENSDNOG00000032525	SRP54	89	91.499	Dasypus_novemcinctus
ENSTBEG00000011409	SRP54	87	80.769	ENSDORG00000005159	-	84	80.769	Dipodomys_ordii
ENSTBEG00000011409	SRP54	96	70.561	FBgn0010747	Srp54k	87	70.295	Drosophila_melanogaster
ENSTBEG00000011409	SRP54	94	53.589	ENSETEG00000012102	-	99	53.589	Echinops_telfairi
ENSTBEG00000011409	SRP54	100	91.051	ENSETEG00000016307	-	89	91.051	Echinops_telfairi
ENSTBEG00000011409	SRP54	100	79.642	ENSEBUG00000009437	-	89	79.642	Eptatretus_burgeri
ENSTBEG00000011409	SRP54	100	91.499	ENSEASG00005002057	SRP54	89	91.499	Equus_asinus_asinus
ENSTBEG00000011409	SRP54	99	91.156	ENSECAG00000018042	SRP54	87	91.156	Equus_caballus
ENSTBEG00000011409	SRP54	100	79.642	ENSEEUG00000001511	SRP54	89	79.642	Erinaceus_europaeus
ENSTBEG00000011409	SRP54	100	86.353	ENSELUG00000003395	srp54	89	86.353	Esox_lucius
ENSTBEG00000011409	SRP54	100	91.275	ENSFCAG00000032033	SRP54	89	91.275	Felis_catus
ENSTBEG00000011409	SRP54	100	90.157	ENSFALG00000005995	SRP54	89	90.157	Ficedula_albicollis
ENSTBEG00000011409	SRP54	100	91.499	ENSFDAG00000016767	SRP54	89	91.499	Fukomys_damarensis
ENSTBEG00000011409	SRP54	100	86.577	ENSFHEG00000004263	srp54	89	86.577	Fundulus_heteroclitus
ENSTBEG00000011409	SRP54	100	81.208	ENSGMOG00000011391	srp54	94	81.208	Gadus_morhua
ENSTBEG00000011409	SRP54	100	90.157	ENSGALG00000023135	SRP54	89	90.157	Gallus_gallus
ENSTBEG00000011409	SRP54	100	87.248	ENSGAFG00000011586	srp54	89	87.248	Gambusia_affinis
ENSTBEG00000011409	SRP54	100	86.577	ENSGACG00000004181	srp54	89	86.577	Gasterosteus_aculeatus
ENSTBEG00000011409	SRP54	100	90.604	ENSGAGG00000014766	SRP54	89	90.604	Gopherus_agassizii
ENSTBEG00000011409	SRP54	100	91.499	ENSGGOG00000002926	SRP54	98	91.499	Gorilla_gorilla
ENSTBEG00000011409	SRP54	100	87.248	ENSHBUG00000005678	srp54	89	87.248	Haplochromis_burtoni
ENSTBEG00000011409	SRP54	100	91.499	ENSHGLG00000002850	SRP54	89	91.499	Heterocephalus_glaber_female
ENSTBEG00000011409	SRP54	100	91.499	ENSHGLG00100005263	SRP54	89	91.499	Heterocephalus_glaber_male
ENSTBEG00000011409	SRP54	99	62.780	ENSHGLG00100007281	-	90	62.780	Heterocephalus_glaber_male
ENSTBEG00000011409	SRP54	100	85.459	ENSHCOG00000021127	srp54	89	85.459	Hippocampus_comes
ENSTBEG00000011409	SRP54	100	86.353	ENSIPUG00000001420	srp54	89	86.353	Ictalurus_punctatus
ENSTBEG00000011409	SRP54	100	91.499	ENSSTOG00000016023	SRP54	89	91.499	Ictidomys_tridecemlineatus
ENSTBEG00000011409	SRP54	98	68.182	ENSJJAG00000016404	-	100	68.182	Jaculus_jaculus
ENSTBEG00000011409	SRP54	100	85.523	ENSJJAG00000013417	-	88	85.523	Jaculus_jaculus
ENSTBEG00000011409	SRP54	100	86.801	ENSKMAG00000007707	srp54	89	86.801	Kryptolebias_marmoratus
ENSTBEG00000011409	SRP54	100	87.025	ENSLBEG00000021122	srp54	89	87.025	Labrus_bergylta
ENSTBEG00000011409	SRP54	100	87.025	ENSLBEG00000018690	srp54	89	87.025	Labrus_bergylta
ENSTBEG00000011409	SRP54	100	87.025	ENSLACG00000017890	SRP54	89	87.025	Latimeria_chalumnae
ENSTBEG00000011409	SRP54	100	88.143	ENSLOCG00000009440	srp54	89	88.143	Lepisosteus_oculatus
ENSTBEG00000011409	SRP54	100	91.499	ENSLAFG00000012007	SRP54	89	91.499	Loxodonta_africana
ENSTBEG00000011409	SRP54	100	91.499	ENSMFAG00000044371	SRP54	98	91.499	Macaca_fascicularis
ENSTBEG00000011409	SRP54	100	91.499	ENSMMUG00000015073	FAM177A1	98	91.499	Macaca_mulatta
ENSTBEG00000011409	SRP54	100	91.499	ENSMNEG00000006947	SRP54	98	91.499	Macaca_nemestrina
ENSTBEG00000011409	SRP54	100	91.499	ENSMLEG00000042251	SRP54	98	91.499	Mandrillus_leucophaeus
ENSTBEG00000011409	SRP54	100	87.248	ENSMAMG00000004803	srp54	89	87.248	Mastacembelus_armatus
ENSTBEG00000011409	SRP54	100	87.248	ENSMZEG00005027528	srp54	89	87.248	Maylandia_zebra
ENSTBEG00000011409	SRP54	99	86.067	ENSMGAG00000012481	SRP54	88	86.067	Meleagris_gallopavo
ENSTBEG00000011409	SRP54	100	91.275	ENSMAUG00000014447	-	89	91.275	Mesocricetus_auratus
ENSTBEG00000011409	SRP54	100	91.499	ENSMICG00000010270	SRP54	89	91.499	Microcebus_murinus
ENSTBEG00000011409	SRP54	98	91.364	ENSMOCG00000000948	-	100	91.364	Microtus_ochrogaster
ENSTBEG00000011409	SRP54	87	83.846	ENSMMOG00000020303	srp54	85	83.846	Mola_mola
ENSTBEG00000011409	SRP54	100	91.275	ENSMODG00000023150	-	89	91.275	Monodelphis_domestica
ENSTBEG00000011409	SRP54	100	91.275	ENSMODG00000012925	-	89	91.275	Monodelphis_domestica
ENSTBEG00000011409	SRP54	86	85.492	ENSMALG00000009163	srp54	85	85.492	Monopterus_albus
ENSTBEG00000011409	SRP54	100	91.275	MGP_CAROLIEiJ_G0017754	-	89	91.275	Mus_caroli
ENSTBEG00000011409	SRP54	100	90.380	ENSMUSG00000079108	Srp54c	89	90.380	Mus_musculus
ENSTBEG00000011409	SRP54	100	91.275	ENSMUSG00000073079	Srp54a	89	91.275	Mus_musculus
ENSTBEG00000011409	SRP54	100	91.275	ENSMUSG00000112449	Srp54b	89	91.275	Mus_musculus
ENSTBEG00000011409	SRP54	100	91.275	MGP_PahariEiJ_G0029510	-	89	91.275	Mus_pahari
ENSTBEG00000011409	SRP54	100	91.499	ENSMPUG00000016302	SRP54	89	91.499	Mustela_putorius_furo
ENSTBEG00000011409	SRP54	100	91.499	ENSMLUG00000008958	SRP54	89	91.499	Myotis_lucifugus
ENSTBEG00000011409	SRP54	100	80.089	ENSNGAG00000019806	-	87	80.089	Nannospalax_galili
ENSTBEG00000011409	SRP54	98	87.273	ENSNBRG00000006000	srp54	100	87.273	Neolamprologus_brichardi
ENSTBEG00000011409	SRP54	100	91.499	ENSNLEG00000003496	SRP54	98	91.499	Nomascus_leucogenys
ENSTBEG00000011409	SRP54	63	86.786	ENSMEUG00000000138	-	63	86.786	Notamacropus_eugenii
ENSTBEG00000011409	SRP54	100	91.499	ENSODEG00000004865	SRP54	89	91.499	Octodon_degus
ENSTBEG00000011409	SRP54	100	87.248	ENSONIG00000011768	srp54	89	87.248	Oreochromis_niloticus
ENSTBEG00000011409	SRP54	100	91.499	ENSOANG00000014051	SRP54	89	91.499	Ornithorhynchus_anatinus
ENSTBEG00000011409	SRP54	100	90.828	ENSOCUG00000007838	SRP54	89	90.828	Oryctolagus_cuniculus
ENSTBEG00000011409	SRP54	100	87.025	ENSORLG00000010027	srp54	89	87.025	Oryzias_latipes
ENSTBEG00000011409	SRP54	100	87.025	ENSORLG00020001878	srp54	89	87.025	Oryzias_latipes_hni
ENSTBEG00000011409	SRP54	100	87.025	ENSORLG00015021866	srp54	89	87.025	Oryzias_latipes_hsok
ENSTBEG00000011409	SRP54	100	86.801	ENSOMEG00000020952	srp54	89	86.801	Oryzias_melastigma
ENSTBEG00000011409	SRP54	100	91.499	ENSOGAG00000012188	SRP54	89	91.499	Otolemur_garnettii
ENSTBEG00000011409	SRP54	100	91.499	ENSOARG00000007160	SRP54	89	91.499	Ovis_aries
ENSTBEG00000011409	SRP54	100	91.499	ENSPPAG00000017434	SRP54	98	91.499	Pan_paniscus
ENSTBEG00000011409	SRP54	100	90.157	ENSPPRG00000014047	SRP54	98	90.157	Panthera_pardus
ENSTBEG00000011409	SRP54	100	91.275	ENSPTIG00000000744	SRP54	85	91.275	Panthera_tigris_altaica
ENSTBEG00000011409	SRP54	100	91.499	ENSPTRG00000006259	FAM177A1	98	91.499	Pan_troglodytes
ENSTBEG00000011409	SRP54	100	91.499	ENSPANG00000023853	SRP54	98	91.499	Papio_anubis
ENSTBEG00000011409	SRP54	100	87.025	ENSPKIG00000001953	srp54	89	87.025	Paramormyrops_kingsleyae
ENSTBEG00000011409	SRP54	100	90.380	ENSPSIG00000006476	SRP54	89	90.380	Pelodiscus_sinensis
ENSTBEG00000011409	SRP54	90	82.878	ENSPMGG00000004127	srp54	87	82.878	Periophthalmus_magnuspinnatus
ENSTBEG00000011409	SRP54	86	98.127	ENSPEMG00000019634	-	86	98.127	Peromyscus_maniculatus_bairdii
ENSTBEG00000011409	SRP54	100	80.089	ENSPMAG00000006078	-	89	80.089	Petromyzon_marinus
ENSTBEG00000011409	SRP54	100	91.275	ENSPCIG00000016175	SRP54	89	91.275	Phascolarctos_cinereus
ENSTBEG00000011409	SRP54	100	87.248	ENSPFOG00000008870	srp54	89	87.248	Poecilia_formosa
ENSTBEG00000011409	SRP54	100	87.248	ENSPLAG00000009889	srp54	89	87.248	Poecilia_latipinna
ENSTBEG00000011409	SRP54	100	87.248	ENSPMEG00000008601	srp54	89	87.248	Poecilia_mexicana
ENSTBEG00000011409	SRP54	100	87.248	ENSPREG00000004505	srp54	89	87.248	Poecilia_reticulata
ENSTBEG00000011409	SRP54	95	90.780	ENSPPYG00000005739	SRP54	84	90.780	Pongo_abelii
ENSTBEG00000011409	SRP54	100	86.801	ENSPCAG00000006268	SRP54	89	86.801	Procavia_capensis
ENSTBEG00000011409	SRP54	100	89.286	ENSPCOG00000022473	SRP54	89	89.286	Propithecus_coquereli
ENSTBEG00000011409	SRP54	51	98.942	ENSPVAG00000010056	SRP54	59	98.942	Pteropus_vampyrus
ENSTBEG00000011409	SRP54	100	87.248	ENSPNYG00000009717	srp54	89	87.248	Pundamilia_nyererei
ENSTBEG00000011409	SRP54	100	87.025	ENSPNAG00000008544	srp54	89	87.025	Pygocentrus_nattereri
ENSTBEG00000011409	SRP54	100	91.051	ENSRNOG00000032776	Srp54a	89	91.051	Rattus_norvegicus
ENSTBEG00000011409	SRP54	100	91.499	ENSRROG00000041292	SRP54	98	91.499	Rhinopithecus_roxellana
ENSTBEG00000011409	SRP54	81	51.233	YPR088C	SRP54	81	45.964	Saccharomyces_cerevisiae
ENSTBEG00000011409	SRP54	100	91.499	ENSSBOG00000035145	SRP54	94	91.499	Saimiri_boliviensis_boliviensis
ENSTBEG00000011409	SRP54	77	89.213	ENSSHAG00000000671	SRP54	100	89.213	Sarcophilus_harrisii
ENSTBEG00000011409	SRP54	100	87.696	ENSSFOG00015013920	srp54	89	87.696	Scleropages_formosus
ENSTBEG00000011409	SRP54	100	81.342	ENSSMAG00000002441	srp54	89	81.342	Scophthalmus_maximus
ENSTBEG00000011409	SRP54	100	87.025	ENSSDUG00000018586	srp54	89	87.025	Seriola_dumerili
ENSTBEG00000011409	SRP54	100	86.801	ENSSLDG00000010476	srp54	89	86.801	Seriola_lalandi_dorsalis
ENSTBEG00000011409	SRP54	100	91.499	ENSSARG00000002744	SRP54	89	91.499	Sorex_araneus
ENSTBEG00000011409	SRP54	100	90.604	ENSSPUG00000013101	SRP54	89	90.604	Sphenodon_punctatus
ENSTBEG00000011409	SRP54	100	87.025	ENSSPAG00000002354	srp54	89	87.025	Stegastes_partitus
ENSTBEG00000011409	SRP54	100	91.499	ENSSSCG00000001955	SRP54	89	91.499	Sus_scrofa
ENSTBEG00000011409	SRP54	93	89.448	ENSTGUG00000011945	-	83	89.448	Taeniopygia_guttata
ENSTBEG00000011409	SRP54	100	86.130	ENSTRUG00000007057	srp54	89	86.130	Takifugu_rubripes
ENSTBEG00000011409	SRP54	100	85.682	ENSTNIG00000002589	srp54	89	85.682	Tetraodon_nigroviridis
ENSTBEG00000011409	SRP54	100	80.089	ENSTTRG00000000928	SRP54	89	80.089	Tursiops_truncatus
ENSTBEG00000011409	SRP54	100	91.499	ENSUMAG00000011234	SRP54	89	91.499	Ursus_maritimus
ENSTBEG00000011409	SRP54	93	90.887	ENSVPAG00000005668	SRP54	88	90.887	Vicugna_pacos
ENSTBEG00000011409	SRP54	100	91.499	ENSVVUG00000019962	SRP54	89	91.499	Vulpes_vulpes
ENSTBEG00000011409	SRP54	100	72.444	ENSXETG00000012290	srp54	89	72.527	Xenopus_tropicalis
ENSTBEG00000011409	SRP54	86	85.751	ENSXCOG00000004658	srp54	84	85.751	Xiphophorus_couchianus
ENSTBEG00000011409	SRP54	100	87.248	ENSXMAG00000018315	srp54	89	87.248	Xiphophorus_maculatus